RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 CLEC4GQ6UXB4 293 aa23.84■■□□□ 1.41
CXCL12-204ENST00000395793 ZNF622Q969S3 477 aaKnown RBP eCLIP23.84■■□□□ 1.41
CXCL12-204ENST00000395793 MYBBP1AQ9BQG0 1328 aaKnown RBP23.84■■□□□ 1.41
CXCL12-204ENST00000395793 HSPA6P17066 643 aa23.83■■□□□ 1.41
CXCL12-204ENST00000395793 HLFQ16534 295 aa23.83■■□□□ 1.41
CXCL12-204ENST00000395793 PNNQ9H307 717 aaKnown RBP23.83■■□□□ 1.41
CXCL12-204ENST00000395793 DICER1Q9UPY3 1922 aaKnown RBP23.82■■□□□ 1.4
CXCL12-204ENST00000395793 CEP350Q5VT06 3117 aa23.82■■□□□ 1.4
CXCL12-204ENST00000395793 ST5P78524 1137 aa23.81■■□□□ 1.4
CXCL12-204ENST00000395793 ZNF219Q9P2Y4 722 aaPredicted RBP23.81■■□□□ 1.4
CXCL12-204ENST00000395793 PDZRN3Q9UPQ7 1066 aa23.81■■□□□ 1.4
CXCL12-204ENST00000395793 ZNF652Q9Y2D9 606 aa23.81■■□□□ 1.4
CXCL12-204ENST00000395793 C21orf2O43822 256 aa23.8■■□□□ 1.4
CXCL12-204ENST00000395793 SRGNP10124 158 aa23.8■■□□□ 1.4
CXCL12-204ENST00000395793 LMNB1P20700 586 aa23.8■■□□□ 1.4
CXCL12-204ENST00000395793 NBPF5PQ86XG9 351 aaPredicted RBP23.8■■□□□ 1.4
CXCL12-204ENST00000395793 NIP7Q9Y221 180 aaKnown RBP eCLIP23.8■■□□□ 1.4
CXCL12-204ENST00000395793 RGL2O15211 777 aa23.79■■□□□ 1.4
CXCL12-204ENST00000395793 NPHP1O15259 732 aa23.79■■□□□ 1.4
CXCL12-204ENST00000395793 TOMM70O94826 608 aa23.79■■□□□ 1.4
CXCL12-204ENST00000395793 RIPK4P57078 832 aa23.79■■□□□ 1.4
CXCL12-204ENST00000395793 TMPOP42166 694 aaKnown RBP23.78■■□□□ 1.4
CXCL12-204ENST00000395793 STYK1Q6J9G0 422 aa23.78■■□□□ 1.4
CXCL12-204ENST00000395793 TTLL7Q6ZT98 887 aa23.78■■□□□ 1.4
CXCL12-204ENST00000395793 NGEFQ8N5V2 710 aa23.78■■□□□ 1.4
CXCL12-204ENST00000395793 KDM2BQ8NHM5 1336 aa23.78■■□□□ 1.4
CXCL12-204ENST00000395793 FAM177BA6PVY3 158 aa23.77■■□□□ 1.4
CXCL12-204ENST00000395793 CCDC146Q8IYE0 955 aa23.77■■□□□ 1.4
CXCL12-204ENST00000395793 RRP7AQ9Y3A4 280 aaKnown RBP23.77■■□□□ 1.4
CXCL12-204ENST00000395793 ZC3H4Q9UPT8 1303 aaKnown RBP23.77■■□□□ 1.4
CXCL12-204ENST00000395793 PRPF40BQ6NWY9 871 aaKnown RBP23.76■■□□□ 1.39
CXCL12-204ENST00000395793 RRAGCQ9HB90 399 aa23.76■■□□□ 1.39
CXCL12-204ENST00000395793 TSPYL4Q9UJ04 414 aa23.76■■□□□ 1.39
CXCL12-204ENST00000395793 MYL6BP14649 208 aa23.75■■□□□ 1.39
CXCL12-204ENST00000395793 MASTLQ96GX5 879 aa23.75■■□□□ 1.39
CXCL12-204ENST00000395793 MAP3K15Q6ZN16 1313 aa23.75■■□□□ 1.39
CXCL12-204ENST00000395793 KLRG2A4D1S0 409 aaPredicted RBP23.74■■□□□ 1.39
CXCL12-204ENST00000395793 CNKSR1Q969H4 720 aa23.74■■□□□ 1.39
CXCL12-204ENST00000395793 ABCC12Q96J65 1359 aa23.74■■□□□ 1.39
CXCL12-204ENST00000395793 LRP10Q7Z4F1 713 aa23.73■■□□□ 1.39
CXCL12-204ENST00000395793 ERVV-1B6SEH8 477 aa23.72■■□□□ 1.39
CXCL12-204ENST00000395793 PDIA6Q15084 440 aa23.72■■□□□ 1.39
CXCL12-204ENST00000395793 TPTE2Q6XPS3 522 aa23.72■■□□□ 1.39
CXCL12-204ENST00000395793 RBM46Q8TBY0 533 aaKnown RBP23.72■■□□□ 1.39
CXCL12-204ENST00000395793 C7orf43Q8WVR3 580 aa23.72■■□□□ 1.39
CXCL12-204ENST00000395793 LTBP3Q9NS15 1303 aa23.72■■□□□ 1.39
CXCL12-204ENST00000395793 WDR90Q96KV7 1748 aa23.72■■□□□ 1.39
CXCL12-204ENST00000395793 ERBB4Q15303 1308 aa23.71■■□□□ 1.39
CXCL12-204ENST00000395793 UBN2Q6ZU65 1347 aa23.71■■□□□ 1.39
CXCL12-204ENST00000395793 GLTPD2A6NH11 291 aa23.71■■□□□ 1.39
CXCL12-204ENST00000395793 ZBTB3Q9H5J0 574 aa23.71■■□□□ 1.39
CXCL12-204ENST00000395793 PRKRIP1Q9H875 184 aaPredicted RBP23.71■■□□□ 1.39
CXCL12-204ENST00000395793 NPR1P16066 1061 aa23.7■■□□□ 1.38
CXCL12-204ENST00000395793 NEUROD2Q15784 382 aa23.7■■□□□ 1.38
CXCL12-204ENST00000395793 TRIM35Q9UPQ4 493 aa23.7■■□□□ 1.38
CXCL12-204ENST00000395793 GPTP24298 496 aa23.69■■□□□ 1.38
CXCL12-204ENST00000395793 LMOD3Q0VAK6 560 aa23.69■■□□□ 1.38
CXCL12-204ENST00000395793 PROSER3Q2NL68 480 aa23.69■■□□□ 1.38
CXCL12-204ENST00000395793 KIF6Q6ZMV9 814 aa23.69■■□□□ 1.38
CXCL12-204ENST00000395793 NUTM1Q86Y26 1132 aa23.69■■□□□ 1.38
CXCL12-204ENST00000395793 RUNDC1Q96C34 613 aa23.69■■□□□ 1.38
CXCL12-204ENST00000395793 TAOK3Q9H2K8 898 aa23.69■■□□□ 1.38
CXCL12-204ENST00000395793 BABAM1Q9NWV8 329 aa23.69■■□□□ 1.38
CXCL12-204ENST00000395793 ADAMTS8Q9UP79 889 aa23.69■■□□□ 1.38
CXCL12-204ENST00000395793 ANKRD36CQ5JPF3 1778 aa23.69■■□□□ 1.38
CXCL12-204ENST00000395793 ANXA1P04083 346 aa23.68■■□□□ 1.38
CXCL12-204ENST00000395793 EIF2S2P20042 333 aaKnown RBP23.68■■□□□ 1.38
CXCL12-204ENST00000395793 KRT24Q2M2I5 525 aa23.68■■□□□ 1.38
CXCL12-204ENST00000395793 OLFM4Q6UX06 510 aa23.68■■□□□ 1.38
CXCL12-204ENST00000395793 C16orf71Q8IYS4 520 aaPredicted RBP23.68■■□□□ 1.38
CXCL12-204ENST00000395793 WDR43Q15061 677 aaKnown RBP eCLIP23.67■■□□□ 1.38
CXCL12-204ENST00000395793 ERFEQ4G0M1 354 aa23.67■■□□□ 1.38
CXCL12-204ENST00000395793 IBTKQ9P2D0 1353 aaPredicted RBP23.66■■□□□ 1.38
CXCL12-204ENST00000395793 POTECB2RU33 542 aa23.66■■□□□ 1.38
CXCL12-204ENST00000395793 APLP1P51693 650 aa23.66■■□□□ 1.38
CXCL12-204ENST00000395793 SUSD4Q5VX71 490 aa23.66■■□□□ 1.38
CXCL12-204ENST00000395793 ZNF34Q8IZ26 560 aa23.66■■□□□ 1.38
CXCL12-204ENST00000395793 RIC1Q4ADV7 1423 aa23.66■■□□□ 1.38
CXCL12-204ENST00000395793 CHL1O00533 1208 aa23.65■■□□□ 1.38
CXCL12-204ENST00000395793 CRY2Q49AN0 593 aa23.65■■□□□ 1.38
CXCL12-204ENST00000395793 SOGA3Q5TF21 947 aa23.65■■□□□ 1.38
CXCL12-204ENST00000395793 GIGYF2Q6Y7W6 1299 aaKnown RBP23.65■■□□□ 1.38
CXCL12-204ENST00000395793 SNED1Q8TER0 1413 aa23.65■■□□□ 1.38
CXCL12-204ENST00000395793 NTSR2O95665 410 aa23.64■■□□□ 1.37
CXCL12-204ENST00000395793 GTF2E1P29083 439 aaPredicted RBP23.64■■□□□ 1.37
CXCL12-204ENST00000395793 FSTL1Q12841 308 aa23.64■■□□□ 1.37
CXCL12-204ENST00000395793 CCDC93Q567U6 631 aa23.64■■□□□ 1.37
CXCL12-204ENST00000395793 NECTIN2Q92692 538 aa23.64■■□□□ 1.37
CXCL12-204ENST00000395793 NYXQ9GZU5 481 aa23.64■■□□□ 1.37
CXCL12-204ENST00000395793 VEGFAP15692 232 aaPredicted RBP23.62■■□□□ 1.37
CXCL12-204ENST00000395793 HTRA3P83110 453 aa23.62■■□□□ 1.37
CXCL12-204ENST00000395793 SLC51AQ86UW1 340 aa23.62■■□□□ 1.37
CXCL12-204ENST00000395793 LAMB2P55268 1798 aa23.62■■□□□ 1.37
CXCL12-204ENST00000395793 C3orf67Q6ZVT6 689 aa23.61■■□□□ 1.37
CXCL12-204ENST00000395793 DNAJC5GQ8N7S2 189 aa23.61■■□□□ 1.37
CXCL12-204ENST00000395793 LAS1LQ9Y4W2 734 aaKnown RBP23.61■■□□□ 1.37
CXCL12-204ENST00000395793 FKBP4Q02790 459 aaKnown RBP eCLIP23.6■■□□□ 1.37
CXCL12-204ENST00000395793 DPY19L2Q6NUT2 758 aa23.59■■□□□ 1.37
CXCL12-204ENST00000395793 SMC1BQ8NDV3 1235 aa23.59■■□□□ 1.37
CXCL12-204ENST00000395793 ZNF277Q9NRM2 450 aaPredicted RBP23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms