RNA–Protein interactions for RNA: ENST00000395577.2

CDKN3-203, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-203ENST00000395577 PDE3BQ13370 1112 aa9.19□□□□□ -0.94
CDKN3-203ENST00000395577 POLIQ9UNA4 740 aa9.19□□□□□ -0.94
CDKN3-203ENST00000395577 BMP2P12643 396 aa9.18□□□□□ -0.94
CDKN3-203ENST00000395577 MZF1P28698 734 aaPredicted RBP9.18□□□□□ -0.94
CDKN3-203ENST00000395577 CTSOP43234 321 aaPredicted RBP9.18□□□□□ -0.94
CDKN3-203ENST00000395577 PHKA2P46019 1235 aa9.18□□□□□ -0.94
CDKN3-203ENST00000395577 DNM1Q05193 864 aaKnown RBP9.18□□□□□ -0.94
CDKN3-203ENST00000395577 NBPF1Q3BBV0 1214 aa9.18□□□□□ -0.94
CDKN3-203ENST00000395577 RHPN1Q8TCX5 695 aa9.18□□□□□ -0.94
CDKN3-203ENST00000395577 EDEM1Q92611 657 aa9.18□□□□□ -0.94
CDKN3-203ENST00000395577 FAM129BQ96TA1 746 aa9.18□□□□□ -0.94
CDKN3-203ENST00000395577 SPATA31C2B4DYI2 1134 aa9.17□□□□□ -0.94
CDKN3-203ENST00000395577 FMR1Q06787 632 aaKnown RBP eCLIP9.17□□□□□ -0.94
CDKN3-203ENST00000395577 DSC3Q14574 896 aa9.17□□□□□ -0.94
CDKN3-203ENST00000395577 TREML1Q86YW5 311 aa9.17□□□□□ -0.94
CDKN3-203ENST00000395577 BCL11AQ9H165 835 aa9.17□□□□□ -0.94
CDKN3-203ENST00000395577 ZDHHC3Q9NYG2 299 aa9.17□□□□□ -0.94
CDKN3-203ENST00000395577 GPR182O15218 404 aa9.16□□□□□ -0.94
CDKN3-203ENST00000395577 PDGFAP04085 211 aa9.16□□□□□ -0.94
CDKN3-203ENST00000395577 TATP17735 454 aaPredicted RBP9.16□□□□□ -0.94
CDKN3-203ENST00000395577 USP5P45974 858 aa9.16□□□□□ -0.94
CDKN3-203ENST00000395577 MAPK8P45983 427 aa9.16□□□□□ -0.94
CDKN3-203ENST00000395577 EHHADHQ08426 723 aa9.16□□□□□ -0.94
CDKN3-203ENST00000395577 POU4F2Q12837 409 aa9.16□□□□□ -0.94
CDKN3-203ENST00000395577 HIF1AQ16665 826 aa9.16□□□□□ -0.94
CDKN3-203ENST00000395577 C6orf118Q5T5N4 469 aa9.16□□□□□ -0.94
CDKN3-203ENST00000395577 IGHA2P01877 340 aa9.15□□□□□ -0.94
CDKN3-203ENST00000395577 PRICKLE2Q7Z3G6 844 aa9.15□□□□□ -0.94
CDKN3-203ENST00000395577 GJD3Q8N144 294 aa9.15□□□□□ -0.94
CDKN3-203ENST00000395577 BCS1LQ9Y276 419 aa9.15□□□□□ -0.94
CDKN3-203ENST00000395577 MICAL2O94851 1124 aa9.14□□□□□ -0.95
CDKN3-203ENST00000395577 PCSK2P16519 638 aa9.14□□□□□ -0.95
CDKN3-203ENST00000395577 VAMP1P23763 118 aa9.14□□□□□ -0.95
CDKN3-203ENST00000395577 MRPL14Q6P1L8 145 aaKnown RBP9.14□□□□□ -0.95
CDKN3-203ENST00000395577 NBPF10Q6P3W6 841 aaKnown RBP9.14□□□□□ -0.95
CDKN3-203ENST00000395577 RNF217Q8TC41 542 aa9.14□□□□□ -0.95
CDKN3-203ENST00000395577 GPR152Q8TDT2 470 aa9.14□□□□□ -0.95
CDKN3-203ENST00000395577 C7orf43Q8WVR3 580 aa9.14□□□□□ -0.95
CDKN3-203ENST00000395577 ALKBH8Q96BT7 664 aaKnown RBP9.14□□□□□ -0.95
CDKN3-203ENST00000395577 NIF3L1Q9GZT8 377 aa9.14□□□□□ -0.95
CDKN3-203ENST00000395577 IGSF5Q9NSI5 407 aa9.14□□□□□ -0.95
CDKN3-203ENST00000395577 TGFBR3LH3BV60 316 aa9.13□□□□□ -0.95
CDKN3-203ENST00000395577 LDHBP07195 334 aaKnown RBP9.13□□□□□ -0.95
CDKN3-203ENST00000395577 BICDL1Q6ZP65 573 aa9.13□□□□□ -0.95
CDKN3-203ENST00000395577 LYSMD3Q7Z3D4 306 aa9.13□□□□□ -0.95
CDKN3-203ENST00000395577 SUSD3Q96L08 255 aa9.13□□□□□ -0.95
CDKN3-203ENST00000395577 FAM13BQ9NYF5 915 aa9.13□□□□□ -0.95
CDKN3-203ENST00000395577 PDZRN3Q9UPQ7 1066 aa9.13□□□□□ -0.95
CDKN3-203ENST00000395577 FGD1P98174 961 aa9.12□□□□□ -0.95
CDKN3-203ENST00000395577 WDR44Q5JSH3 913 aa9.12□□□□□ -0.95
CDKN3-203ENST00000395577 TTC16Q8NEE8 873 aa9.12□□□□□ -0.95
CDKN3-203ENST00000395577 NUDT16Q96DE0 195 aaKnown RBP9.12□□□□□ -0.95
CDKN3-203ENST00000395577 GPC6Q9Y625 555 aaPredicted RBP9.12□□□□□ -0.95
CDKN3-203ENST00000395577 FAM187AA6NFU0 413 aa9.11□□□□□ -0.95
CDKN3-203ENST00000395577 ATP2B2Q01814 1243 aa9.11□□□□□ -0.95
CDKN3-203ENST00000395577 C8orf34Q49A92 452 aa9.11□□□□□ -0.95
CDKN3-203ENST00000395577 ZNF280CQ8ND82 737 aa9.11□□□□□ -0.95
CDKN3-203ENST00000395577 KLRG1Q96E93 195 aa9.11□□□□□ -0.95
CDKN3-203ENST00000395577 HSH2DQ96JZ2 352 aa9.11□□□□□ -0.95
CDKN3-203ENST00000395577 NEUROD4Q9HD90 331 aa9.11□□□□□ -0.95
CDKN3-203ENST00000395577 ANKIB1Q9P2G1 1089 aa9.11□□□□□ -0.95
CDKN3-203ENST00000395577 PRPF40AO75400 957 aaKnown RBP9.1□□□□□ -0.95
CDKN3-203ENST00000395577 RHOQP17081 205 aa9.1□□□□□ -0.95
CDKN3-203ENST00000395577 XPCQ01831 940 aaPredicted RBP9.1□□□□□ -0.95
CDKN3-203ENST00000395577 SCARF1Q14162 830 aa9.1□□□□□ -0.95
CDKN3-203ENST00000395577 IER5Q5VY09 327 aa9.1□□□□□ -0.95
CDKN3-203ENST00000395577 PIK3R5Q8WYR1 880 aa9.1□□□□□ -0.95
CDKN3-203ENST00000395577 GGNBP2Q9H3C7 697 aa9.1□□□□□ -0.95
CDKN3-203ENST00000395577 TIMMDC1Q9NPL8 285 aa9.1□□□□□ -0.95
CDKN3-203ENST00000395577 TTLL8A6PVC2 850 aa9.09□□□□□ -0.95
CDKN3-203ENST00000395577 OPLAHO14841 1288 aa9.09□□□□□ -0.95
CDKN3-203ENST00000395577 RPLP1P05386 114 aaKnown RBP9.09□□□□□ -0.95
CDKN3-203ENST00000395577 TCF3P15923 654 aa9.09□□□□□ -0.95
CDKN3-203ENST00000395577 ATP4AP20648 1035 aa9.09□□□□□ -0.95
CDKN3-203ENST00000395577 IDH3AP50213 366 aa9.09□□□□□ -0.95
CDKN3-203ENST00000395577 ARSJQ5FYB0 599 aaPredicted RBP9.09□□□□□ -0.95
CDKN3-203ENST00000395577 DUSP9Q99956 384 aaKnown RBP9.09□□□□□ -0.95
CDKN3-203ENST00000395577 DMGDHQ9UI17 866 aaKnown RBP9.09□□□□□ -0.95
CDKN3-203ENST00000395577 WWC3Q9ULE0 1092 aa9.09□□□□□ -0.95
CDKN3-203ENST00000395577 PNMA6FA0A0J9YX94 578 aa9.08□□□□□ -0.96
CDKN3-203ENST00000395577 A0A1B0GTH6 734 aa9.08□□□□□ -0.96
CDKN3-203ENST00000395577 FIGNL2A6NMB9 653 aa9.08□□□□□ -0.96
CDKN3-203ENST00000395577 RECKO95980 971 aa9.08□□□□□ -0.96
CDKN3-203ENST00000395577 AVPP01185 164 aa9.08□□□□□ -0.96
CDKN3-203ENST00000395577 BMP1P13497 986 aa9.08□□□□□ -0.96
CDKN3-203ENST00000395577 MSX1P28360 303 aa9.08□□□□□ -0.96
CDKN3-203ENST00000395577 ENOX2Q16206 610 aaKnown RBP9.08□□□□□ -0.96
CDKN3-203ENST00000395577 ZIC5Q96T25 663 aa9.08□□□□□ -0.96
CDKN3-203ENST00000395577 PARP2Q9UGN5 583 aa9.08□□□□□ -0.96
CDKN3-203ENST00000395577 A6NHS1 94 aa9.07□□□□□ -0.96
CDKN3-203ENST00000395577 ARSDP51689 593 aa9.07□□□□□ -0.96
CDKN3-203ENST00000395577 TSNAXIP1Q2TAA8 658 aa9.07□□□□□ -0.96
CDKN3-203ENST00000395577 LRRC69Q6ZNQ3 347 aa9.07□□□□□ -0.96
CDKN3-203ENST00000395577 SETDB2Q96T68 719 aa9.07□□□□□ -0.96
CDKN3-203ENST00000395577 SOS2Q07890 1332 aaPredicted RBP9.06□□□□□ -0.96
CDKN3-203ENST00000395577 RGS20O76081 388 aa9.06□□□□□ -0.96
CDKN3-203ENST00000395577 NEFLP07196 543 aa9.06□□□□□ -0.96
CDKN3-203ENST00000395577 ORC1Q13415 861 aa9.06□□□□□ -0.96
CDKN3-203ENST00000395577 MRPL58Q14197 206 aaKnown RBP9.06□□□□□ -0.96
CDKN3-203ENST00000395577 BTLAQ7Z6A9 289 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms