RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 GTF3C3Q9Y5Q9 886 aa9.12□□□□□ -0.95
AP3S1-202ENST00000395548 IQGAP1P46940 1657 aa9.12□□□□□ -0.95
AP3S1-202ENST00000395548 STRCP1A6NGW2 1772 aa9.12□□□□□ -0.95
AP3S1-202ENST00000395548 TNRQ92752 1358 aa9.12□□□□□ -0.95
AP3S1-202ENST00000395548 ABCC1P33527 1531 aa9.11□□□□□ -0.95
AP3S1-202ENST00000395548 ITGA6P23229 1130 aa9.11□□□□□ -0.95
AP3S1-202ENST00000395548 SLC27A3Q5K4L6 730 aa9.11□□□□□ -0.95
AP3S1-202ENST00000395548 SIRT1Q96EB6 747 aa9.11□□□□□ -0.95
AP3S1-202ENST00000395548 COG6Q9Y2V7 657 aa9.11□□□□□ -0.95
AP3S1-202ENST00000395548 RAD21O60216 631 aa9.1□□□□□ -0.95
AP3S1-202ENST00000395548 CDCA7Q9BWT1 371 aaPredicted RBP9.1□□□□□ -0.95
AP3S1-202ENST00000395548 ARHGEF10LQ9HCE6 1279 aa9.1□□□□□ -0.95
AP3S1-202ENST00000395548 EP400Q96L91 3159 aa9.1□□□□□ -0.95
AP3S1-202ENST00000395548 PHLPP1O60346 1717 aa9.1□□□□□ -0.95
AP3S1-202ENST00000395548 CLTCQ00610 1675 aaKnown RBP9.1□□□□□ -0.95
AP3S1-202ENST00000395548 TMEM132AQ24JP5 1023 aa9.09□□□□□ -0.95
AP3S1-202ENST00000395548 SV2AQ7L0J3 742 aa9.09□□□□□ -0.95
AP3S1-202ENST00000395548 CDC14CA4D256 554 aa9.08□□□□□ -0.96
AP3S1-202ENST00000395548 RHOQP17081 205 aa9.08□□□□□ -0.96
AP3S1-202ENST00000395548 MAP7D1Q3KQU3 841 aa9.08□□□□□ -0.96
AP3S1-202ENST00000395548 GGT6Q6P531 493 aa9.08□□□□□ -0.96
AP3S1-202ENST00000395548 VWA5B2Q8N398 1253 aa9.08□□□□□ -0.96
AP3S1-202ENST00000395548 GRIP2Q9C0E4 1043 aa9.08□□□□□ -0.96
AP3S1-202ENST00000395548 SLAIN2Q9P270 581 aa9.08□□□□□ -0.96
AP3S1-202ENST00000395548 CHIC2Q9UKJ5 165 aa9.08□□□□□ -0.96
AP3S1-202ENST00000395548 NHSL1Q5SYE7 1610 aa9.07□□□□□ -0.96
AP3S1-202ENST00000395548 C1QTNF8P60827 252 aa9.07□□□□□ -0.96
AP3S1-202ENST00000395548 TSGA10IPQ3SY00 556 aa9.07□□□□□ -0.96
AP3S1-202ENST00000395548 ESCO1Q5FWF5 840 aa9.07□□□□□ -0.96
AP3S1-202ENST00000395548 GPR161Q8N6U8 529 aaKnown RBP9.07□□□□□ -0.96
AP3S1-202ENST00000395548 CNKSR1Q969H4 720 aa9.07□□□□□ -0.96
AP3S1-202ENST00000395548 ESYT1Q9BSJ8 1104 aa9.07□□□□□ -0.96
AP3S1-202ENST00000395548 NLRP1Q9C000 1473 aa9.07□□□□□ -0.96
AP3S1-202ENST00000395548 UGGT1Q9NYU2 1555 aa9.07□□□□□ -0.96
AP3S1-202ENST00000395548 ARHGAP5Q13017 1502 aa9.06□□□□□ -0.96
AP3S1-202ENST00000395548 OXLD1Q5BKU9 147 aa9.06□□□□□ -0.96
AP3S1-202ENST00000395548 WDR44Q5JSH3 913 aa9.06□□□□□ -0.96
AP3S1-202ENST00000395548 HOMEZQ8IX15 550 aa9.06□□□□□ -0.96
AP3S1-202ENST00000395548 TMEM94Q12767 1356 aa9.06□□□□□ -0.96
AP3S1-202ENST00000395548 NWD1Q149M9 1564 aa9.06□□□□□ -0.96
AP3S1-202ENST00000395548 CEP350Q5VT06 3117 aa9.06□□□□□ -0.96
AP3S1-202ENST00000395548 MYO5CQ9NQX4 1742 aa9.05□□□□□ -0.96
AP3S1-202ENST00000395548 ITSN2Q9NZM3 1697 aa9.05□□□□□ -0.96
AP3S1-202ENST00000395548 UBTFP17480 764 aaKnown RBP9.05□□□□□ -0.96
AP3S1-202ENST00000395548 LORP23490 312 aaPredicted RBP9.05□□□□□ -0.96
AP3S1-202ENST00000395548 GTF2E1P29083 439 aaPredicted RBP9.05□□□□□ -0.96
AP3S1-202ENST00000395548 POU4F2Q12837 409 aa9.05□□□□□ -0.96
AP3S1-202ENST00000395548 XAGE2Q96GT9 111 aa9.05□□□□□ -0.96
AP3S1-202ENST00000395548 GMCL1Q96IK5 515 aa9.05□□□□□ -0.96
AP3S1-202ENST00000395548 COL25A1Q9BXS0 654 aaPredicted RBP9.05□□□□□ -0.96
AP3S1-202ENST00000395548 RAB6BQ9NRW1 208 aa9.05□□□□□ -0.96
AP3S1-202ENST00000395548 DYRK1BQ9Y463 629 aa9.05□□□□□ -0.96
AP3S1-202ENST00000395548 ATP7AQ04656 1500 aa9.05□□□□□ -0.96
AP3S1-202ENST00000395548 MSH6P52701 1360 aa9.04□□□□□ -0.96
AP3S1-202ENST00000395548 SPATA31C2B4DYI2 1134 aa9.04□□□□□ -0.96
AP3S1-202ENST00000395548 IL2RAP01589 272 aa9.04□□□□□ -0.96
AP3S1-202ENST00000395548 CENPCQ03188 943 aa9.04□□□□□ -0.96
AP3S1-202ENST00000395548 SF3B2Q13435 895 aaKnown RBP9.04□□□□□ -0.96
AP3S1-202ENST00000395548 PLPP7Q8NBV4 271 aa9.04□□□□□ -0.96
AP3S1-202ENST00000395548 CNTNAP3BQ96NU0 1288 aa9.04□□□□□ -0.96
AP3S1-202ENST00000395548 CNTNAP3Q9BZ76 1288 aa9.04□□□□□ -0.96
AP3S1-202ENST00000395548 COL16A1Q07092 1604 aaPredicted RBP9.03□□□□□ -0.96
AP3S1-202ENST00000395548 NBPF10Q6P3W6 841 aaKnown RBP9.03□□□□□ -0.96
AP3S1-202ENST00000395548 TAS1R3Q7RTX0 852 aa9.03□□□□□ -0.96
AP3S1-202ENST00000395548 PROSER2Q86WR7 435 aaPredicted RBP9.03□□□□□ -0.96
AP3S1-202ENST00000395548 NBPF15Q8N660 670 aa9.03□□□□□ -0.96
AP3S1-202ENST00000395548 POM121Q96HA1 1249 aa9.03□□□□□ -0.96
AP3S1-202ENST00000395548 CDK11AQ9UQ88 783 aaPredicted RBP9.03□□□□□ -0.96
AP3S1-202ENST00000395548 H7C1W4 665 aa9.02□□□□□ -0.97
AP3S1-202ENST00000395548 WASLO00401 505 aaPredicted RBP9.02□□□□□ -0.97
AP3S1-202ENST00000395548 FOXR1Q6PIV2 292 aa9.02□□□□□ -0.97
AP3S1-202ENST00000395548 RIPOR1Q6ZS17 1223 aa9.02□□□□□ -0.97
AP3S1-202ENST00000395548 TRIM22Q8IYM9 498 aa9.02□□□□□ -0.97
AP3S1-202ENST00000395548 C8orf37Q96NL8 207 aa9.02□□□□□ -0.97
AP3S1-202ENST00000395548 ZSCAN10Q96SZ4 725 aaPredicted RBP9.02□□□□□ -0.97
AP3S1-202ENST00000395548 XIRP1Q702N8 1843 aaKnown RBP9.02□□□□□ -0.97
AP3S1-202ENST00000395548 BLMP54132 1417 aaPredicted RBP9.02□□□□□ -0.97
AP3S1-202ENST00000395548 MIA2Q96PC5 1412 aa9.02□□□□□ -0.97
AP3S1-202ENST00000395548 KIF14Q15058 1648 aa9.02□□□□□ -0.97
AP3S1-202ENST00000395548 KIDINS220Q9ULH0 1771 aa9.01□□□□□ -0.97
AP3S1-202ENST00000395548 SHPRHQ149N8 1683 aa9.01□□□□□ -0.97
AP3S1-202ENST00000395548 KRT76Q01546 638 aa9.01□□□□□ -0.97
AP3S1-202ENST00000395548 GNASQ5JWF2 1037 aa9.01□□□□□ -0.97
AP3S1-202ENST00000395548 GAS2L1Q99501 681 aaPredicted RBP9.01□□□□□ -0.97
AP3S1-202ENST00000395548 ALG2Q9H553 416 aa9.01□□□□□ -0.97
AP3S1-202ENST00000395548 TIMMDC1Q9NPL8 285 aa9.01□□□□□ -0.97
AP3S1-202ENST00000395548 HRH3Q9Y5N1 445 aa9.01□□□□□ -0.97
AP3S1-202ENST00000395548 LZTS3O60299 673 aaPredicted RBP9□□□□□ -0.97
AP3S1-202ENST00000395548 TMEM214Q6NUQ4 689 aaKnown RBP9□□□□□ -0.97
AP3S1-202ENST00000395548 CUEDC1Q9NWM3 386 aaPredicted RBP9□□□□□ -0.97
AP3S1-202ENST00000395548 SPAG9O60271 1321 aaKnown RBP9□□□□□ -0.97
AP3S1-202ENST00000395548 KCNA6P17658 529 aa8.99□□□□□ -0.97
AP3S1-202ENST00000395548 NFATC2IPQ8NCF5 419 aa8.99□□□□□ -0.97
AP3S1-202ENST00000395548 TRPC5Q9UL62 973 aaPredicted RBP8.99□□□□□ -0.97
AP3S1-202ENST00000395548 PZPP20742 1482 aa8.99□□□□□ -0.97
AP3S1-202ENST00000395548 ABCC3O15438 1527 aa8.99□□□□□ -0.97
AP3S1-202ENST00000395548 SAMD9Q5K651 1589 aa8.99□□□□□ -0.97
AP3S1-202ENST00000395548 A2MP01023 1474 aa8.98□□□□□ -0.97
AP3S1-202ENST00000395548 SCAF11Q99590 1463 aaKnown RBP8.98□□□□□ -0.97
AP3S1-202ENST00000395548 F11P03951 625 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms