RNA–Protein interactions for RNA: ENST00000394939.3

GTF2IRD2B-201, Transcript of GTF2I repeat domain containing 2B, humanhuman

TSL 3

Gene GTF2IRD2B, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD2B-201ENST00000394939 COPS6Q7L5N1 327 aa15.45■□□□□ 0.06
GTF2IRD2B-201ENST00000394939 DZIP3Q86Y13 1208 aaKnown RBP15.45■□□□□ 0.06
GTF2IRD2B-201ENST00000394939 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.45■□□□□ 0.06
GTF2IRD2B-201ENST00000394939 XAGE3Q8WTP9 111 aa15.45■□□□□ 0.06
GTF2IRD2B-201ENST00000394939 ANO8Q9HCE9 1232 aaPredicted RBP15.45■□□□□ 0.06
GTF2IRD2B-201ENST00000394939 LRP10Q7Z4F1 713 aa15.44■□□□□ 0.06
GTF2IRD2B-201ENST00000394939 PHAXQ9H814 394 aaKnown RBP15.44■□□□□ 0.06
GTF2IRD2B-201ENST00000394939 QSER1Q2KHR3 1735 aa15.43■□□□□ 0.06
GTF2IRD2B-201ENST00000394939 RGL2O15211 777 aa15.43■□□□□ 0.06
GTF2IRD2B-201ENST00000394939 BCAR3O75815 825 aa15.43■□□□□ 0.06
GTF2IRD2B-201ENST00000394939 ANKRD13DQ6ZTN6 518 aa15.43■□□□□ 0.06
GTF2IRD2B-201ENST00000394939 ARHGAP45Q92619 1136 aa15.43■□□□□ 0.06
GTF2IRD2B-201ENST00000394939 ARHGEF1Q92888 912 aaKnown RBP15.43■□□□□ 0.06
GTF2IRD2B-201ENST00000394939 ZNF652Q9Y2D9 606 aa15.43■□□□□ 0.06
GTF2IRD2B-201ENST00000394939 MAP3K15Q6ZN16 1313 aa15.43■□□□□ 0.06
GTF2IRD2B-201ENST00000394939 ERVV-1B6SEH8 477 aa15.42■□□□□ 0.06
GTF2IRD2B-201ENST00000394939 G2E3Q7L622 706 aa15.42■□□□□ 0.06
GTF2IRD2B-201ENST00000394939 RIC3Q7Z5B4 369 aa15.42■□□□□ 0.06
GTF2IRD2B-201ENST00000394939 PLBD2Q8NHP8 589 aa15.42■□□□□ 0.06
GTF2IRD2B-201ENST00000394939 FRAT1Q92837 279 aaPredicted RBP15.42■□□□□ 0.06
GTF2IRD2B-201ENST00000394939 API5Q9BZZ5 524 aaKnown RBP15.42■□□□□ 0.06
GTF2IRD2B-201ENST00000394939 NARFQ9UHQ1 456 aa15.42■□□□□ 0.06
GTF2IRD2B-201ENST00000394939 NOB1Q9ULX3 412 aaKnown RBP15.42■□□□□ 0.06
GTF2IRD2B-201ENST00000394939 TBC1D2BQ9UPU7 963 aa15.42■□□□□ 0.06
GTF2IRD2B-201ENST00000394939 MS4A1P11836 297 aa15.41■□□□□ 0.06
GTF2IRD2B-201ENST00000394939 HSP90AB3PQ58FF7 597 aa15.41■□□□□ 0.06
GTF2IRD2B-201ENST00000394939 ZKSCAN2Q63HK3 967 aa15.41■□□□□ 0.06
GTF2IRD2B-201ENST00000394939 KSR2Q6VAB6 950 aa15.41■□□□□ 0.06
GTF2IRD2B-201ENST00000394939 TTLL7Q6ZT98 887 aa15.41■□□□□ 0.06
GTF2IRD2B-201ENST00000394939 PNPLA7Q6ZV29 1317 aa15.41■□□□□ 0.06
GTF2IRD2B-201ENST00000394939 TUBGCP6Q96RT7 1819 aa15.4■□□□□ 0.06
GTF2IRD2B-201ENST00000394939 NEXNQ0ZGT2 675 aa15.4■□□□□ 0.06
GTF2IRD2B-201ENST00000394939 CLEC4GQ6UXB4 293 aa15.4■□□□□ 0.06
GTF2IRD2B-201ENST00000394939 COL23A1Q86Y22 540 aaPredicted RBP15.4■□□□□ 0.06
GTF2IRD2B-201ENST00000394939 ZBTB3Q9H5J0 574 aa15.4■□□□□ 0.06
GTF2IRD2B-201ENST00000394939 USP42Q9H9J4 1324 aaKnown RBP15.4■□□□□ 0.06
GTF2IRD2B-201ENST00000394939 PI4KAP2A4QPH2 592 aa15.39■□□□□ 0.05
GTF2IRD2B-201ENST00000394939 CAMTA2O94983 1202 aa15.39■□□□□ 0.05
GTF2IRD2B-201ENST00000394939 USPL1Q5W0Q7 1092 aa15.39■□□□□ 0.05
GTF2IRD2B-201ENST00000394939 ATF7IPQ6VMQ6 1270 aa15.39■□□□□ 0.05
GTF2IRD2B-201ENST00000394939 AMIGO3Q86WK7 504 aa15.39■□□□□ 0.05
GTF2IRD2B-201ENST00000394939 PI4KAP1Q8N8J0 262 aa15.39■□□□□ 0.05
GTF2IRD2B-201ENST00000394939 SLC16A10Q8TF71 515 aa15.39■□□□□ 0.05
GTF2IRD2B-201ENST00000394939 DNAAF4Q8WXU2 420 aa15.39■□□□□ 0.05
GTF2IRD2B-201ENST00000394939 C4AP0C0L4 1744 aa15.39■□□□□ 0.05
GTF2IRD2B-201ENST00000394939 ABCB7O75027 752 aa15.38■□□□□ 0.05
GTF2IRD2B-201ENST00000394939 R3HDM1Q15032 1099 aaKnown RBP15.38■□□□□ 0.05
GTF2IRD2B-201ENST00000394939 GIGYF2Q6Y7W6 1299 aaKnown RBP15.38■□□□□ 0.05
GTF2IRD2B-201ENST00000394939 SMIM5Q71RC9 77 aa15.38■□□□□ 0.05
GTF2IRD2B-201ENST00000394939 FTSJ3Q8IY81 847 aaKnown RBP15.38■□□□□ 0.05
GTF2IRD2B-201ENST00000394939 ZNF219Q9P2Y4 722 aaPredicted RBP15.38■□□□□ 0.05
GTF2IRD2B-201ENST00000394939 MAP3K2Q9Y2U5 619 aa15.38■□□□□ 0.05
GTF2IRD2B-201ENST00000394939 SCN7AQ01118 1682 aa15.38■□□□□ 0.05
GTF2IRD2B-201ENST00000394939 BCORQ6W2J9 1755 aa15.37■□□□□ 0.05
GTF2IRD2B-201ENST00000394939 NLGN1Q8N2Q7 840 aa15.37■□□□□ 0.05
GTF2IRD2B-201ENST00000394939 METTL22Q9BUU2 404 aaPredicted RBP15.37■□□□□ 0.05
GTF2IRD2B-201ENST00000394939 SRP68Q9UHB9 627 aaKnown RBP15.37■□□□□ 0.05
GTF2IRD2B-201ENST00000394939 ADCY9O60503 1353 aa15.36■□□□□ 0.05
GTF2IRD2B-201ENST00000394939 SLC4A10Q6U841 1118 aa15.36■□□□□ 0.05
GTF2IRD2B-201ENST00000394939 ARFGEF2Q9Y6D5 1785 aa15.36■□□□□ 0.05
GTF2IRD2B-201ENST00000394939 PXDNLA1KZ92 1463 aa15.35■□□□□ 0.05
GTF2IRD2B-201ENST00000394939 F6X3S4 739 aa15.35■□□□□ 0.05
GTF2IRD2B-201ENST00000394939 GYS1P13807 737 aa15.35■□□□□ 0.05
GTF2IRD2B-201ENST00000394939 TRIM27P14373 513 aa15.35■□□□□ 0.05
GTF2IRD2B-201ENST00000394939 CCT4P50991 539 aaKnown RBP15.35■□□□□ 0.05
GTF2IRD2B-201ENST00000394939 RRP1P56182 461 aaKnown RBP15.35■□□□□ 0.05
GTF2IRD2B-201ENST00000394939 TCIRG1Q13488 830 aa15.35■□□□□ 0.05
GTF2IRD2B-201ENST00000394939 DZIP1LQ8IYY4 767 aaKnown RBP15.35■□□□□ 0.05
GTF2IRD2B-201ENST00000394939 NUP98P52948 1817 aa15.35■□□□□ 0.05
GTF2IRD2B-201ENST00000394939 ATP10DQ9P241 1426 aa15.34■□□□□ 0.05
GTF2IRD2B-201ENST00000394939 HLFQ16534 295 aa15.34■□□□□ 0.05
GTF2IRD2B-201ENST00000394939 PARP10Q53GL7 1025 aa15.34■□□□□ 0.05
GTF2IRD2B-201ENST00000394939 LINS1Q8NG48 757 aa15.34■□□□□ 0.05
GTF2IRD2B-201ENST00000394939 SETDB2Q96T68 719 aa15.34■□□□□ 0.05
GTF2IRD2B-201ENST00000394939 MYD88Q99836 296 aa15.34■□□□□ 0.05
GTF2IRD2B-201ENST00000394939 SRCIN1Q9C0H9 1055 aa15.34■□□□□ 0.05
GTF2IRD2B-201ENST00000394939 PSDA5PKW4 1024 aaPredicted RBP15.33■□□□□ 0.04
GTF2IRD2B-201ENST00000394939 TRIM28Q13263 835 aaKnown RBP15.33■□□□□ 0.04
GTF2IRD2B-201ENST00000394939 FKBP8Q14318 412 aa15.33■□□□□ 0.04
GTF2IRD2B-201ENST00000394939 PDE3AQ14432 1141 aa15.33■□□□□ 0.04
GTF2IRD2B-201ENST00000394939 BCL2L12Q9HB09 334 aa15.33■□□□□ 0.04
GTF2IRD2B-201ENST00000394939 NIP7Q9Y221 180 aaKnown RBP eCLIP15.33■□□□□ 0.04
GTF2IRD2B-201ENST00000394939 SUPT16HQ9Y5B9 1047 aaKnown RBP15.33■□□□□ 0.04
GTF2IRD2B-201ENST00000394939 ABCC4O15439 1325 aa15.33■□□□□ 0.04
GTF2IRD2B-201ENST00000394939 PLIN1O60240 522 aa15.32■□□□□ 0.04
GTF2IRD2B-201ENST00000394939 ALDH1L1O75891 902 aa15.32■□□□□ 0.04
GTF2IRD2B-201ENST00000394939 PPP1R42Q7Z4L9 355 aa15.32■□□□□ 0.04
GTF2IRD2B-201ENST00000394939 ZNF34Q8IZ26 560 aa15.32■□□□□ 0.04
GTF2IRD2B-201ENST00000394939 CCDC191Q8NCU4 936 aa15.32■□□□□ 0.04
GTF2IRD2B-201ENST00000394939 CLUAP1Q96AJ1 413 aa15.32■□□□□ 0.04
GTF2IRD2B-201ENST00000394939 ANKRD36CQ5JPF3 1778 aa15.31■□□□□ 0.04
GTF2IRD2B-201ENST00000394939 ATP5J2-PTCD1G3V325 749 aa15.31■□□□□ 0.04
GTF2IRD2B-201ENST00000394939 GPTP24298 496 aa15.31■□□□□ 0.04
GTF2IRD2B-201ENST00000394939 BEND3Q5T5X7 828 aa15.31■□□□□ 0.04
GTF2IRD2B-201ENST00000394939 TBC1D9BQ66K14 1250 aa15.31■□□□□ 0.04
GTF2IRD2B-201ENST00000394939 BICDL1Q6ZP65 573 aa15.31■□□□□ 0.04
GTF2IRD2B-201ENST00000394939 ISCA1Q9BUE6 129 aa15.31■□□□□ 0.04
GTF2IRD2B-201ENST00000394939 NYXQ9GZU5 481 aa15.31■□□□□ 0.04
GTF2IRD2B-201ENST00000394939 MTFR1LQ9H019 292 aa15.31■□□□□ 0.04
GTF2IRD2B-201ENST00000394939 CHMP4BQ9H444 224 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms