RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 IRX3P78415 501 aaPredicted RBP22.47■■□□□ 1.19
HOXC6-202ENST00000394331 OSBPL3Q9H4L5 887 aa22.47■■□□□ 1.19
HOXC6-202ENST00000394331 AP5Z1O43299 807 aa22.46■■□□□ 1.19
HOXC6-202ENST00000394331 GNAI3P08754 354 aa22.46■■□□□ 1.19
HOXC6-202ENST00000394331 RIMS1Q86UR5 1692 aaKnown RBP22.46■■□□□ 1.19
HOXC6-202ENST00000394331 XRN1Q8IZH2 1706 aaKnown RBP22.45■■□□□ 1.18
HOXC6-202ENST00000394331 FLIIQ13045 1269 aa22.45■■□□□ 1.18
HOXC6-202ENST00000394331 KCNA6P17658 529 aa22.44■■□□□ 1.18
HOXC6-202ENST00000394331 TCHHQ07283 1943 aa22.44■■□□□ 1.18
HOXC6-202ENST00000394331 MAP3K5Q99683 1374 aa22.44■■□□□ 1.18
HOXC6-202ENST00000394331 ABTB2Q8N961 1025 aa22.44■■□□□ 1.18
HOXC6-202ENST00000394331 CYP2C19P33261 490 aa22.43■■□□□ 1.18
HOXC6-202ENST00000394331 KIF1BPQ96EK5 621 aa22.43■■□□□ 1.18
HOXC6-202ENST00000394331 TNNT1P13805 278 aa22.43■■□□□ 1.18
HOXC6-202ENST00000394331 TAF7Q15545 349 aaPredicted RBP22.43■■□□□ 1.18
HOXC6-202ENST00000394331 RGPD8O14715 1765 aaPredicted RBP22.42■■□□□ 1.18
HOXC6-202ENST00000394331 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.42■■□□□ 1.18
HOXC6-202ENST00000394331 CHRM1P11229 460 aaPredicted RBP22.42■■□□□ 1.18
HOXC6-202ENST00000394331 PDE1AP54750 535 aa22.42■■□□□ 1.18
HOXC6-202ENST00000394331 EFCC1Q9HA90 598 aa22.42■■□□□ 1.18
HOXC6-202ENST00000394331 LRRC37A3O60309 1634 aa22.42■■□□□ 1.18
HOXC6-202ENST00000394331 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.41■■□□□ 1.18
HOXC6-202ENST00000394331 TEX2Q8IWB9 1127 aa22.41■■□□□ 1.18
HOXC6-202ENST00000394331 YY1AP1Q9H869 796 aa22.41■■□□□ 1.18
HOXC6-202ENST00000394331 MCCP23508 829 aa22.41■■□□□ 1.18
HOXC6-202ENST00000394331 KMT5BQ4FZB7 885 aa22.41■■□□□ 1.18
HOXC6-202ENST00000394331 IL17REQ8NFR9 667 aa22.41■■□□□ 1.18
HOXC6-202ENST00000394331 GDPD2Q9HCC8 539 aa22.41■■□□□ 1.18
HOXC6-202ENST00000394331 NUTM2GQ5VZR2 741 aa22.41■■□□□ 1.18
HOXC6-202ENST00000394331 TUBGCP6Q96RT7 1819 aa22.4■■□□□ 1.18
HOXC6-202ENST00000394331 RNF20Q5VTR2 975 aa22.4■■□□□ 1.18
HOXC6-202ENST00000394331 SRCIN1Q9C0H9 1055 aa22.4■■□□□ 1.18
HOXC6-202ENST00000394331 PTGS1P23219 599 aa22.39■■□□□ 1.18
HOXC6-202ENST00000394331 ATP8B2P98198 1209 aa22.39■■□□□ 1.18
HOXC6-202ENST00000394331 LRRCC1Q9C099 1032 aa22.39■■□□□ 1.18
HOXC6-202ENST00000394331 FEZ2Q9UHY8 353 aaPredicted RBP22.39■■□□□ 1.18
HOXC6-202ENST00000394331 NWD1Q149M9 1564 aa22.39■■□□□ 1.17
HOXC6-202ENST00000394331 C16orf45Q96MC5 204 aaPredicted RBP22.39■■□□□ 1.17
HOXC6-202ENST00000394331 USP54Q70EL1 1684 aa22.38■■□□□ 1.17
HOXC6-202ENST00000394331 TRIM6-TRIM34B2RNG4 842 aa22.38■■□□□ 1.17
HOXC6-202ENST00000394331 EPB41L2O43491 1005 aaKnown RBP22.38■■□□□ 1.17
HOXC6-202ENST00000394331 CCDC192P0DO97 292 aa22.38■■□□□ 1.17
HOXC6-202ENST00000394331 SPC24Q8NBT2 197 aa22.38■■□□□ 1.17
HOXC6-202ENST00000394331 TRIM34Q9BYJ4 488 aa22.38■■□□□ 1.17
HOXC6-202ENST00000394331 FER1L4A9Z1Z3 1794 aa22.38■■□□□ 1.17
HOXC6-202ENST00000394331 FAM200AQ8TCP9 573 aa22.37■■□□□ 1.17
HOXC6-202ENST00000394331 LTV1Q96GA3 475 aaPredicted RBP22.37■■□□□ 1.17
HOXC6-202ENST00000394331 EXOC6BQ9Y2D4 811 aa22.37■■□□□ 1.17
HOXC6-202ENST00000394331 ATP6V1DQ9Y5K8 247 aa22.37■■□□□ 1.17
HOXC6-202ENST00000394331 RBM6P78332 1123 aaKnown RBP22.37■■□□□ 1.17
HOXC6-202ENST00000394331 ERO1AQ96HE7 468 aa22.37■■□□□ 1.17
HOXC6-202ENST00000394331 PAXIP1Q6ZW49 1069 aaPredicted RBP22.36■■□□□ 1.17
HOXC6-202ENST00000394331 CCDC171Q6TFL3 1326 aa22.36■■□□□ 1.17
HOXC6-202ENST00000394331 PHF8Q9UPP1 1060 aa22.36■■□□□ 1.17
HOXC6-202ENST00000394331 PLCB2Q00722 1185 aa22.35■■□□□ 1.17
HOXC6-202ENST00000394331 RGS22Q8NE09 1264 aa22.35■■□□□ 1.17
HOXC6-202ENST00000394331 SALL3Q9BXA9 1300 aa22.35■■□□□ 1.17
HOXC6-202ENST00000394331 PXDNLA1KZ92 1463 aa22.35■■□□□ 1.17
HOXC6-202ENST00000394331 ZSCAN22P10073 491 aaPredicted RBP22.35■■□□□ 1.17
HOXC6-202ENST00000394331 NECTIN2Q92692 538 aa22.35■■□□□ 1.17
HOXC6-202ENST00000394331 CHMP4AQ9BY43 222 aa22.35■■□□□ 1.17
HOXC6-202ENST00000394331 CNPY2Q9Y2B0 182 aa22.35■■□□□ 1.17
HOXC6-202ENST00000394331 MUM1L1Q5H9M0 696 aa22.34■■□□□ 1.17
HOXC6-202ENST00000394331 C14orf37Q86TY3 774 aa22.34■■□□□ 1.17
HOXC6-202ENST00000394331 NOL10Q9BSC4 688 aaKnown RBP22.34■■□□□ 1.17
HOXC6-202ENST00000394331 ERICH4A6NGS2 130 aa22.34■■□□□ 1.17
HOXC6-202ENST00000394331 NAA30Q147X3 362 aaPredicted RBP22.34■■□□□ 1.17
HOXC6-202ENST00000394331 CEP135Q66GS9 1140 aa22.34■■□□□ 1.17
HOXC6-202ENST00000394331 ZSCAN25Q6NSZ9 544 aa22.34■■□□□ 1.17
HOXC6-202ENST00000394331 HDGFL1Q5TGJ6 251 aa22.34■■□□□ 1.17
HOXC6-202ENST00000394331 IP6K1Q92551 441 aa22.34■■□□□ 1.17
HOXC6-202ENST00000394331 FAM208AQ9UK61 1670 aaKnown RBP22.33■■□□□ 1.17
HOXC6-202ENST00000394331 PNMA6EA0A0J9YXQ4 647 aa22.33■■□□□ 1.17
HOXC6-202ENST00000394331 BMS1Q14692 1282 aaKnown RBP22.33■■□□□ 1.17
HOXC6-202ENST00000394331 GIMAP6Q6P9H5 292 aa22.33■■□□□ 1.17
HOXC6-202ENST00000394331 FBXO38Q6PIJ6 1188 aa22.33■■□□□ 1.16
HOXC6-202ENST00000394331 CCDC186Q7Z3E2 898 aa22.33■■□□□ 1.16
HOXC6-202ENST00000394331 MARF1Q9Y4F3 1742 aaKnown RBP22.32■■□□□ 1.16
HOXC6-202ENST00000394331 HNRNPH2P55795 449 aaKnown RBP22.32■■□□□ 1.16
HOXC6-202ENST00000394331 UBTFL1P0CB47 393 aaPredicted RBP22.32■■□□□ 1.16
HOXC6-202ENST00000394331 PLA2G4DQ86XP0 818 aa22.32■■□□□ 1.16
HOXC6-202ENST00000394331 LRRFIP2Q9Y608 721 aaKnown RBP22.32■■□□□ 1.16
HOXC6-202ENST00000394331 ESYT1Q9BSJ8 1104 aa22.31■■□□□ 1.16
HOXC6-202ENST00000394331 USP44Q9H0E7 712 aa22.31■■□□□ 1.16
HOXC6-202ENST00000394331 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.31■■□□□ 1.16
HOXC6-202ENST00000394331 STAP2Q9UGK3 403 aa22.31■■□□□ 1.16
HOXC6-202ENST00000394331 RAD51AP2Q09MP3 1159 aa22.31■■□□□ 1.16
HOXC6-202ENST00000394331 CACNA1FO60840 1977 aa22.31■■□□□ 1.16
HOXC6-202ENST00000394331 CDC25BP30305 580 aa22.3■■□□□ 1.16
HOXC6-202ENST00000394331 TPD52L1Q16890 204 aaPredicted RBP22.3■■□□□ 1.16
HOXC6-202ENST00000394331 CEMIPQ8WUJ3 1361 aa22.3■■□□□ 1.16
HOXC6-202ENST00000394331 NEMFO60524 1076 aa22.3■■□□□ 1.16
HOXC6-202ENST00000394331 HOXB7P09629 217 aa22.3■■□□□ 1.16
HOXC6-202ENST00000394331 NYAP1Q6ZVC0 841 aa22.3■■□□□ 1.16
HOXC6-202ENST00000394331 GEMIN8Q9NWZ8 242 aaKnown RBP22.3■■□□□ 1.16
HOXC6-202ENST00000394331 KCND1Q9NSA2 647 aa22.29■■□□□ 1.16
HOXC6-202ENST00000394331 ZNF215Q9UL58 517 aaPredicted RBP22.29■■□□□ 1.16
HOXC6-202ENST00000394331 AOX1Q06278 1338 aa22.29■■□□□ 1.16
HOXC6-202ENST00000394331 USHBP1Q8N6Y0 703 aa22.29■■□□□ 1.16
HOXC6-202ENST00000394331 F13A1P00488 732 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms