RNA–Protein interactions for RNA: ENST00000394055.7

CDH16-202, Transcript of cadherin 16, humanhuman

TSL 1 (best) BASIC

Gene CDH16, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-202ENST00000394055 BRINP3Q76B58 766 aa17.87■□□□□ 0.45
CDH16-202ENST00000394055 DCAF5Q96JK2 942 aa17.87■□□□□ 0.45
CDH16-202ENST00000394055 SIL1Q9H173 461 aa17.87■□□□□ 0.45
CDH16-202ENST00000394055 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.87■□□□□ 0.45
CDH16-202ENST00000394055 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.87■□□□□ 0.45
CDH16-202ENST00000394055 CNTROBQ8N137 903 aa17.86■□□□□ 0.45
CDH16-202ENST00000394055 BAG4O95429 457 aaKnown RBP17.86■□□□□ 0.45
CDH16-202ENST00000394055 CABP4P57796 275 aa17.86■□□□□ 0.45
CDH16-202ENST00000394055 KLHDC4Q8TBB5 520 aa17.86■□□□□ 0.45
CDH16-202ENST00000394055 CWC27Q6UX04 472 aaKnown RBP17.85■□□□□ 0.45
CDH16-202ENST00000394055 TMX3Q96JJ7 454 aa17.85■□□□□ 0.45
CDH16-202ENST00000394055 CRYBG1Q9Y4K1 1723 aa17.85■□□□□ 0.45
CDH16-202ENST00000394055 NEXNQ0ZGT2 675 aa17.85■□□□□ 0.45
CDH16-202ENST00000394055 L1TD1Q5T7N2 865 aaKnown RBP17.85■□□□□ 0.45
CDH16-202ENST00000394055 LARP1Q6PKG0 1096 aaKnown RBP17.85■□□□□ 0.45
CDH16-202ENST00000394055 AACSQ86V21 672 aa17.85■□□□□ 0.45
CDH16-202ENST00000394055 PRDM11Q9NQV5 511 aa17.85■□□□□ 0.45
CDH16-202ENST00000394055 LMTK3Q96Q04 1460 aa17.85■□□□□ 0.45
CDH16-202ENST00000394055 IFIT2P09913 472 aaKnown RBP17.85■□□□□ 0.45
CDH16-202ENST00000394055 NEURL1BA8MQ27 555 aa17.84■□□□□ 0.45
CDH16-202ENST00000394055 SNRPA1P09661 255 aaKnown RBP17.84■□□□□ 0.45
CDH16-202ENST00000394055 FOXD4L5Q5VV16 416 aaPredicted RBP17.84■□□□□ 0.45
CDH16-202ENST00000394055 FOXD4L4Q8WXT5 416 aaPredicted RBP17.84■□□□□ 0.45
CDH16-202ENST00000394055 GLRX3O76003 335 aaKnown RBP17.84■□□□□ 0.45
CDH16-202ENST00000394055 NUCB2P80303 420 aa17.84■□□□□ 0.45
CDH16-202ENST00000394055 HDAC5Q9UQL6 1122 aa17.84■□□□□ 0.45
CDH16-202ENST00000394055 SGSM2O43147 1006 aa17.83■□□□□ 0.45
CDH16-202ENST00000394055 MCTP1Q6DN14 999 aa17.83■□□□□ 0.45
CDH16-202ENST00000394055 TOM1L2Q6ZVM7 507 aa17.83■□□□□ 0.45
CDH16-202ENST00000394055 FMNL2Q96PY5 1086 aa17.83■□□□□ 0.45
CDH16-202ENST00000394055 ECHDC1Q9NTX5 307 aa17.83■□□□□ 0.45
CDH16-202ENST00000394055 FSD2A1L4K1 749 aa17.83■□□□□ 0.44
CDH16-202ENST00000394055 SASH1O94885 1247 aa17.83■□□□□ 0.44
CDH16-202ENST00000394055 EPHA10Q5JZY3 1008 aa17.83■□□□□ 0.44
CDH16-202ENST00000394055 ANKRD13DQ6ZTN6 518 aa17.83■□□□□ 0.44
CDH16-202ENST00000394055 UTYO14607 1347 aa17.82■□□□□ 0.44
CDH16-202ENST00000394055 TTC41PQ6P2S7 1318 aa17.82■□□□□ 0.44
CDH16-202ENST00000394055 GOLGA6L22H0YM25 854 aa17.82■□□□□ 0.44
CDH16-202ENST00000394055 XRCC6P12956 609 aaKnown RBP eCLIP17.82■□□□□ 0.44
CDH16-202ENST00000394055 ANAPC15P60006 121 aa17.82■□□□□ 0.44
CDH16-202ENST00000394055 G3BP1Q13283 466 aaKnown RBP eCLIP17.82■□□□□ 0.44
CDH16-202ENST00000394055 GCKRQ14397 625 aa17.82■□□□□ 0.44
CDH16-202ENST00000394055 ERC1Q8IUD2 1116 aa17.82■□□□□ 0.44
CDH16-202ENST00000394055 CHAMP1Q96JM3 812 aa17.82■□□□□ 0.44
CDH16-202ENST00000394055 METTL22Q9BUU2 404 aaPredicted RBP17.82■□□□□ 0.44
CDH16-202ENST00000394055 CCDC8Q9H0W5 538 aaPredicted RBP17.82■□□□□ 0.44
CDH16-202ENST00000394055 DNAJC5Q9H3Z4 198 aa17.82■□□□□ 0.44
CDH16-202ENST00000394055 CYP2E1P05181 493 aaPredicted RBP17.82■□□□□ 0.44
CDH16-202ENST00000394055 PANK2Q9BZ23 570 aa17.82■□□□□ 0.44
CDH16-202ENST00000394055 CWC22Q9HCG8 908 aaKnown RBP17.82■□□□□ 0.44
CDH16-202ENST00000394055 USP42Q9H9J4 1324 aaKnown RBP17.81■□□□□ 0.44
CDH16-202ENST00000394055 ATP5J2-PTCD1G3V325 749 aa17.81■□□□□ 0.44
CDH16-202ENST00000394055 PTCD1O75127 700 aaKnown RBP17.81■□□□□ 0.44
CDH16-202ENST00000394055 CPDO75976 1380 aa17.81■□□□□ 0.44
CDH16-202ENST00000394055 HSPA4P34932 840 aa17.81■□□□□ 0.44
CDH16-202ENST00000394055 LRP10Q7Z4F1 713 aa17.81■□□□□ 0.44
CDH16-202ENST00000394055 EAF2Q96CJ1 260 aaPredicted RBP17.81■□□□□ 0.44
CDH16-202ENST00000394055 DIAPH3Q9NSV4 1193 aa17.81■□□□□ 0.44
CDH16-202ENST00000394055 TLR7Q9NYK1 1049 aaKnown RBP17.81■□□□□ 0.44
CDH16-202ENST00000394055 RAD50Q92878 1312 aa17.81■□□□□ 0.44
CDH16-202ENST00000394055 GPATCH3Q96I76 525 aa17.8■□□□□ 0.44
CDH16-202ENST00000394055 ZDHHC9Q9Y397 364 aa17.8■□□□□ 0.44
CDH16-202ENST00000394055 KIAA1211Q6ZU35 1233 aa17.8■□□□□ 0.44
CDH16-202ENST00000394055 LSG1Q9H089 658 aaKnown RBP17.8■□□□□ 0.44
CDH16-202ENST00000394055 XIRP1Q702N8 1843 aaKnown RBP17.79■□□□□ 0.44
CDH16-202ENST00000394055 SKOR2Q2VWA4 1001 aaPredicted RBP17.79■□□□□ 0.44
CDH16-202ENST00000394055 CLEC17AQ6ZS10 378 aa17.79■□□□□ 0.44
CDH16-202ENST00000394055 ZNF335Q9H4Z2 1342 aaPredicted RBP17.79■□□□□ 0.44
CDH16-202ENST00000394055 UBE3BQ7Z3V4 1068 aa17.79■□□□□ 0.44
CDH16-202ENST00000394055 STRN4Q9NRL3 753 aa17.79■□□□□ 0.44
CDH16-202ENST00000394055 DDX49Q9Y6V7 483 aaKnown RBP17.79■□□□□ 0.44
CDH16-202ENST00000394055 MRC1P22897 1456 aa17.79■□□□□ 0.44
CDH16-202ENST00000394055 MCM2P49736 904 aa17.78■□□□□ 0.44
CDH16-202ENST00000394055 RASEFQ8IZ41 740 aa17.78■□□□□ 0.44
CDH16-202ENST00000394055 DDX54Q8TDD1 881 aaKnown RBP17.78■□□□□ 0.44
CDH16-202ENST00000394055 LARP6Q9BRS8 491 aaKnown RBP17.78■□□□□ 0.44
CDH16-202ENST00000394055 SLAIN2Q9P270 581 aa17.78■□□□□ 0.44
CDH16-202ENST00000394055 SNX14Q9Y5W7 946 aa17.78■□□□□ 0.44
CDH16-202ENST00000394055 PKD1L3Q7Z443 1732 aa17.78■□□□□ 0.44
CDH16-202ENST00000394055 WDR17Q8IZU2 1322 aa17.78■□□□□ 0.44
CDH16-202ENST00000394055 ZCRB1Q8TBF4 217 aaKnown RBP17.77■□□□□ 0.44
CDH16-202ENST00000394055 PTMSP20962 102 aa17.77■□□□□ 0.44
CDH16-202ENST00000394055 NCLP19338 710 aaKnown RBP17.76■□□□□ 0.43
CDH16-202ENST00000394055 GAS2L3Q86XJ1 694 aa17.76■□□□□ 0.43
CDH16-202ENST00000394055 BOLA2Q9H3K6 86 aa17.76■□□□□ 0.43
CDH16-202ENST00000394055 CPA1P15085 419 aa17.76■□□□□ 0.43
CDH16-202ENST00000394055 PTH1RQ03431 593 aa17.76■□□□□ 0.43
CDH16-202ENST00000394055 ABCC6O95255 1503 aa17.76■□□□□ 0.43
CDH16-202ENST00000394055 CUL4AQ13619 759 aa17.76■□□□□ 0.43
CDH16-202ENST00000394055 A0A087WZG4 1122 aa17.75■□□□□ 0.43
CDH16-202ENST00000394055 HSP90AA2PQ14568 343 aaPredicted RBP17.75■□□□□ 0.43
CDH16-202ENST00000394055 GRPEL1Q9HAV7 217 aa17.75■□□□□ 0.43
CDH16-202ENST00000394055 PCDH11XQ9BZA7 1347 aa17.75■□□□□ 0.43
CDH16-202ENST00000394055 PCDH11YQ9BZA8 1340 aa17.75■□□□□ 0.43
CDH16-202ENST00000394055 NBPF26B4DH59 902 aa17.75■□□□□ 0.43
CDH16-202ENST00000394055 NBPF14Q5TI25 921 aa17.75■□□□□ 0.43
CDH16-202ENST00000394055 NBPF10Q6P3W6 841 aaKnown RBP17.75■□□□□ 0.43
CDH16-202ENST00000394055 NBPF15Q8N660 670 aa17.75■□□□□ 0.43
CDH16-202ENST00000394055 EVI5LQ96CN4 794 aa17.75■□□□□ 0.43
CDH16-202ENST00000394055 FAM227BQ96M60 508 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms