RNA–Protein interactions for RNA: ENST00000394023.7

SMARCC2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-203ENST00000394023 FERMT3Q86UX7 667 aa22.56■■□□□ 1.2
SMARCC2-203ENST00000394023 DDX21Q9NR30 783 aaKnown RBP eCLIP22.55■■□□□ 1.2
SMARCC2-203ENST00000394023 PHF14O94880 888 aa22.55■■□□□ 1.2
SMARCC2-203ENST00000394023 WASHC4Q2M389 1173 aa22.54■■□□□ 1.2
SMARCC2-203ENST00000394023 ZNF496Q96IT1 587 aaPredicted RBP22.54■■□□□ 1.2
SMARCC2-203ENST00000394023 PSMA5P28066 241 aa22.54■■□□□ 1.2
SMARCC2-203ENST00000394023 KIF20BQ96Q89 1820 aa22.54■■□□□ 1.2
SMARCC2-203ENST00000394023 MBD3O95983 291 aa22.54■■□□□ 1.2
SMARCC2-203ENST00000394023 SUCLG2Q96I99 432 aa22.54■■□□□ 1.2
SMARCC2-203ENST00000394023 HIP1O00291 1037 aa22.53■■□□□ 1.2
SMARCC2-203ENST00000394023 BLOC1S2Q6QNY1 142 aa22.53■■□□□ 1.2
SMARCC2-203ENST00000394023 IBTKQ9P2D0 1353 aaPredicted RBP22.53■■□□□ 1.2
SMARCC2-203ENST00000394023 KLHL40Q2TBA0 621 aa22.53■■□□□ 1.2
SMARCC2-203ENST00000394023 ZRSR1Q15695 479 aaKnown RBP22.52■■□□□ 1.2
SMARCC2-203ENST00000394023 EVI5LQ96CN4 794 aa22.52■■□□□ 1.2
SMARCC2-203ENST00000394023 HOXB7P09629 217 aa22.52■■□□□ 1.2
SMARCC2-203ENST00000394023 FKBP4Q02790 459 aaKnown RBP eCLIP22.51■■□□□ 1.19
SMARCC2-203ENST00000394023 LIMCH1Q9UPQ0 1083 aa22.51■■□□□ 1.19
SMARCC2-203ENST00000394023 CSPP1Q1MSJ5 1256 aa22.51■■□□□ 1.19
SMARCC2-203ENST00000394023 NPHP3Q7Z494 1330 aa22.51■■□□□ 1.19
SMARCC2-203ENST00000394023 NECAB1Q8N987 351 aa22.51■■□□□ 1.19
SMARCC2-203ENST00000394023 USP16Q9Y5T5 823 aa22.51■■□□□ 1.19
SMARCC2-203ENST00000394023 NDUFB9Q9Y6M9 179 aa22.51■■□□□ 1.19
SMARCC2-203ENST00000394023 LARP1BQ659C4 914 aaKnown RBP22.5■■□□□ 1.19
SMARCC2-203ENST00000394023 DRC7Q8IY82 874 aa22.5■■□□□ 1.19
SMARCC2-203ENST00000394023 NPHP1O15259 732 aa22.5■■□□□ 1.19
SMARCC2-203ENST00000394023 APPP05067 770 aa22.49■■□□□ 1.19
SMARCC2-203ENST00000394023 LMBR1LQ6UX01 489 aa22.49■■□□□ 1.19
SMARCC2-203ENST00000394023 ANAPC15P60006 121 aa22.48■■□□□ 1.19
SMARCC2-203ENST00000394023 DDX46Q7L014 1031 aaKnown RBP22.48■■□□□ 1.19
SMARCC2-203ENST00000394023 ISY1Q9ULR0 285 aaKnown RBP22.48■■□□□ 1.19
SMARCC2-203ENST00000394023 OSBPL3Q9H4L5 887 aa22.48■■□□□ 1.19
SMARCC2-203ENST00000394023 PPFIA3O75145 1194 aa22.48■■□□□ 1.19
SMARCC2-203ENST00000394023 CEBPZQ03701 1054 aaKnown RBP22.48■■□□□ 1.19
SMARCC2-203ENST00000394023 SLC52A2Q9HAB3 445 aa22.48■■□□□ 1.19
SMARCC2-203ENST00000394023 TOMM22Q9NS69 142 aa22.48■■□□□ 1.19
SMARCC2-203ENST00000394023 AK2P54819 239 aa22.48■■□□□ 1.19
SMARCC2-203ENST00000394023 KDRP35968 1356 aa22.48■■□□□ 1.19
SMARCC2-203ENST00000394023 ESPNB1AK53 854 aa22.47■■□□□ 1.19
SMARCC2-203ENST00000394023 ZSCAN23Q3MJ62 389 aa22.47■■□□□ 1.19
SMARCC2-203ENST00000394023 NMIQ13287 307 aaPredicted RBP22.47■■□□□ 1.19
SMARCC2-203ENST00000394023 ATP10DQ9P241 1426 aa22.47■■□□□ 1.19
SMARCC2-203ENST00000394023 RBM8AQ9Y5S9 174 aaKnown RBP22.47■■□□□ 1.19
SMARCC2-203ENST00000394023 SGSM2O43147 1006 aa22.46■■□□□ 1.19
SMARCC2-203ENST00000394023 CCDC57Q2TAC2 916 aa22.46■■□□□ 1.19
SMARCC2-203ENST00000394023 DDX11Q96FC9 970 aa22.46■■□□□ 1.19
SMARCC2-203ENST00000394023 CEP170BQ9Y4F5 1589 aaPredicted RBP22.46■■□□□ 1.19
SMARCC2-203ENST00000394023 BICD2Q8TD16 824 aa22.46■■□□□ 1.19
SMARCC2-203ENST00000394023 EDC3Q96F86 508 aaKnown RBP22.46■■□□□ 1.19
SMARCC2-203ENST00000394023 FAM227BQ96M60 508 aa22.46■■□□□ 1.19
SMARCC2-203ENST00000394023 ZCRB1Q8TBF4 217 aaKnown RBP22.46■■□□□ 1.19
SMARCC2-203ENST00000394023 ANKARQ7Z5J8 1434 aa22.46■■□□□ 1.19
SMARCC2-203ENST00000394023 KDM4AO75164 1064 aa22.45■■□□□ 1.19
SMARCC2-203ENST00000394023 DCAF5Q96JK2 942 aa22.45■■□□□ 1.18
SMARCC2-203ENST00000394023 SNRKQ9NRH2 765 aa22.45■■□□□ 1.18
SMARCC2-203ENST00000394023 CEP126Q9P2H0 1117 aa22.45■■□□□ 1.18
SMARCC2-203ENST00000394023 GPTP24298 496 aa22.44■■□□□ 1.18
SMARCC2-203ENST00000394023 TSPY26PQ9H489 355 aa22.44■■□□□ 1.18
SMARCC2-203ENST00000394023 CCDC173Q0VFZ6 552 aa22.44■■□□□ 1.18
SMARCC2-203ENST00000394023 GNL2Q13823 731 aaKnown RBP22.44■■□□□ 1.18
SMARCC2-203ENST00000394023 KIF6Q6ZMV9 814 aa22.44■■□□□ 1.18
SMARCC2-203ENST00000394023 GAS2L3Q86XJ1 694 aa22.44■■□□□ 1.18
SMARCC2-203ENST00000394023 GOLIM4O00461 696 aa22.44■■□□□ 1.18
SMARCC2-203ENST00000394023 GJB2P29033 226 aa22.44■■□□□ 1.18
SMARCC2-203ENST00000394023 SNX14Q9Y5W7 946 aa22.44■■□□□ 1.18
SMARCC2-203ENST00000394023 TTC41PQ6P2S7 1318 aa22.43■■□□□ 1.18
SMARCC2-203ENST00000394023 TFCP2Q12800 502 aa22.43■■□□□ 1.18
SMARCC2-203ENST00000394023 TMOD3Q9NYL9 352 aa22.43■■□□□ 1.18
SMARCC2-203ENST00000394023 STX6O43752 255 aa22.43■■□□□ 1.18
SMARCC2-203ENST00000394023 EAF2Q96CJ1 260 aaPredicted RBP22.43■■□□□ 1.18
SMARCC2-203ENST00000394023 NPHP4O75161 1426 aaPredicted RBP22.43■■□□□ 1.18
SMARCC2-203ENST00000394023 KIAA2012Q0VF49 1180 aa22.43■■□□□ 1.18
SMARCC2-203ENST00000394023 DIP2AQ14689 1571 aa22.42■■□□□ 1.18
SMARCC2-203ENST00000394023 PHKG2P15735 406 aa22.42■■□□□ 1.18
SMARCC2-203ENST00000394023 LRRC2Q9BYS8 371 aa22.42■■□□□ 1.18
SMARCC2-203ENST00000394023 STAP2Q9UGK3 403 aa22.42■■□□□ 1.18
SMARCC2-203ENST00000394023 A1BGP04217 495 aa22.42■■□□□ 1.18
SMARCC2-203ENST00000394023 ERBB3P21860 1342 aa22.42■■□□□ 1.18
SMARCC2-203ENST00000394023 PRIM1P49642 420 aaKnown RBP22.42■■□□□ 1.18
SMARCC2-203ENST00000394023 GCKRQ14397 625 aa22.41■■□□□ 1.18
SMARCC2-203ENST00000394023 ITSN1Q15811 1721 aa22.41■■□□□ 1.18
SMARCC2-203ENST00000394023 ZSCAN31Q96LW9 406 aaPredicted RBP22.41■■□□□ 1.18
SMARCC2-203ENST00000394023 ARID3AQ99856 593 aa22.41■■□□□ 1.18
SMARCC2-203ENST00000394023 TTC39AQ5SRH9 613 aa22.41■■□□□ 1.18
SMARCC2-203ENST00000394023 FBXW7Q969H0 707 aa22.4■■□□□ 1.18
SMARCC2-203ENST00000394023 CNPY2Q9Y2B0 182 aa22.4■■□□□ 1.18
SMARCC2-203ENST00000394023 RASEFQ8IZ41 740 aa22.4■■□□□ 1.18
SMARCC2-203ENST00000394023 METTL22Q9BUU2 404 aaPredicted RBP22.4■■□□□ 1.18
SMARCC2-203ENST00000394023 CNNM1Q9NRU3 951 aa22.4■■□□□ 1.18
SMARCC2-203ENST00000394023 CWC25Q9NXE8 425 aaPredicted RBP22.4■■□□□ 1.18
SMARCC2-203ENST00000394023 TMEM94Q12767 1356 aa22.4■■□□□ 1.18
SMARCC2-203ENST00000394023 GTF2E1P29083 439 aaPredicted RBP22.4■■□□□ 1.18
SMARCC2-203ENST00000394023 PTH1RQ03431 593 aa22.4■■□□□ 1.18
SMARCC2-203ENST00000394023 SF3A1Q15459 793 aaKnown RBP22.4■■□□□ 1.18
SMARCC2-203ENST00000394023 HSPA4P34932 840 aa22.39■■□□□ 1.18
SMARCC2-203ENST00000394023 CCDC158Q5M9N0 1113 aa22.39■■□□□ 1.18
SMARCC2-203ENST00000394023 USP48Q86UV5 1035 aa22.39■■□□□ 1.17
SMARCC2-203ENST00000394023 RAD50Q92878 1312 aa22.39■■□□□ 1.17
SMARCC2-203ENST00000394023 NEURL1BA8MQ27 555 aa22.39■■□□□ 1.17
SMARCC2-203ENST00000394023 IFIT1P09914 478 aaKnown RBP22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms