RNA–Protein interactions for RNA: ENST00000393879.3

NKIRAS2-203, Transcript of NFKB inhibitor interacting Ras like 2, humanhuman

TSL 1 (best)

Gene NKIRAS2, Length 4,213 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKIRAS2-203ENST00000393879 LIMCH1Q9UPQ0 1083 aa11.83□□□□□ -0.52
NKIRAS2-203ENST00000393879 CCDC57Q2TAC2 916 aa11.83□□□□□ -0.52
NKIRAS2-203ENST00000393879 ZNF790Q6PG37 636 aa11.83□□□□□ -0.52
NKIRAS2-203ENST00000393879 TTC41PQ6P2S7 1318 aa11.83□□□□□ -0.52
NKIRAS2-203ENST00000393879 PIP4K2AP48426 406 aaPredicted RBP11.83□□□□□ -0.52
NKIRAS2-203ENST00000393879 CCDC173Q0VFZ6 552 aa11.82□□□□□ -0.52
NKIRAS2-203ENST00000393879 KLHL40Q2TBA0 621 aa11.82□□□□□ -0.52
NKIRAS2-203ENST00000393879 ARHGEF25Q86VW2 580 aa11.82□□□□□ -0.52
NKIRAS2-203ENST00000393879 CCDC83Q8IWF9 413 aa11.82□□□□□ -0.52
NKIRAS2-203ENST00000393879 ZGPATQ8N5A5 531 aaKnown RBP11.82□□□□□ -0.52
NKIRAS2-203ENST00000393879 SSH3Q8TE77 659 aa11.82□□□□□ -0.52
NKIRAS2-203ENST00000393879 LARP6Q9BRS8 491 aaKnown RBP11.82□□□□□ -0.52
NKIRAS2-203ENST00000393879 CEP126Q9P2H0 1117 aa11.82□□□□□ -0.52
NKIRAS2-203ENST00000393879 SETD1BQ9UPS6 1966 aaKnown RBP11.82□□□□□ -0.52
NKIRAS2-203ENST00000393879 APPP05067 770 aa11.82□□□□□ -0.52
NKIRAS2-203ENST00000393879 GTF2E1P29083 439 aaPredicted RBP11.82□□□□□ -0.52
NKIRAS2-203ENST00000393879 ITSN1Q15811 1721 aa11.82□□□□□ -0.52
NKIRAS2-203ENST00000393879 STK3Q13188 491 aa11.82□□□□□ -0.52
NKIRAS2-203ENST00000393879 CCDC158Q5M9N0 1113 aa11.82□□□□□ -0.52
NKIRAS2-203ENST00000393879 TOMM22Q9NS69 142 aa11.82□□□□□ -0.52
NKIRAS2-203ENST00000393879 NRKQ7Z2Y5 1582 aa11.82□□□□□ -0.52
NKIRAS2-203ENST00000393879 SF3A1Q15459 793 aaKnown RBP11.81□□□□□ -0.52
NKIRAS2-203ENST00000393879 LARP1BQ659C4 914 aaKnown RBP11.81□□□□□ -0.52
NKIRAS2-203ENST00000393879 BICD2Q8TD16 824 aa11.81□□□□□ -0.52
NKIRAS2-203ENST00000393879 DCAF5Q96JK2 942 aa11.81□□□□□ -0.52
NKIRAS2-203ENST00000393879 PTPRUQ92729 1446 aa11.81□□□□□ -0.52
NKIRAS2-203ENST00000393879 GIGYF1O75420 1035 aaPredicted RBP11.81□□□□□ -0.52
NKIRAS2-203ENST00000393879 ZBTB3Q9H5J0 574 aa11.81□□□□□ -0.52
NKIRAS2-203ENST00000393879 AOX1Q06278 1338 aa11.81□□□□□ -0.52
NKIRAS2-203ENST00000393879 KRT32Q14532 448 aa11.81□□□□□ -0.52
NKIRAS2-203ENST00000393879 TMOD3Q9NYL9 352 aa11.81□□□□□ -0.52
NKIRAS2-203ENST00000393879 AKAP12Q02952 1782 aa11.81□□□□□ -0.52
NKIRAS2-203ENST00000393879 GOLGA6L6A8MZA4 724 aa11.81□□□□□ -0.52
NKIRAS2-203ENST00000393879 XRCC6P12956 609 aaKnown RBP eCLIP11.81□□□□□ -0.52
NKIRAS2-203ENST00000393879 TRDNQ13061 729 aa11.81□□□□□ -0.52
NKIRAS2-203ENST00000393879 TTC39AQ5SRH9 613 aa11.81□□□□□ -0.52
NKIRAS2-203ENST00000393879 DDX17Q92841 729 aaKnown RBP11.81□□□□□ -0.52
NKIRAS2-203ENST00000393879 TSPY26PQ9H489 355 aa11.81□□□□□ -0.52
NKIRAS2-203ENST00000393879 NPHP4O75161 1426 aaPredicted RBP11.8□□□□□ -0.52
NKIRAS2-203ENST00000393879 IBTKQ9P2D0 1353 aaPredicted RBP11.8□□□□□ -0.52
NKIRAS2-203ENST00000393879 FOSBP53539 338 aa11.8□□□□□ -0.52
NKIRAS2-203ENST00000393879 ZCRB1Q8TBF4 217 aaKnown RBP11.8□□□□□ -0.52
NKIRAS2-203ENST00000393879 CCDC85AQ96PX6 553 aaPredicted RBP11.8□□□□□ -0.52
NKIRAS2-203ENST00000393879 OSBPL3Q9H4L5 887 aa11.8□□□□□ -0.52
NKIRAS2-203ENST00000393879 BICC1Q9H694 974 aaKnown RBP11.8□□□□□ -0.52
NKIRAS2-203ENST00000393879 CPLX1O14810 134 aa11.8□□□□□ -0.52
NKIRAS2-203ENST00000393879 RALYLQ86SE5 291 aaKnown RBP11.8□□□□□ -0.52
NKIRAS2-203ENST00000393879 SH2B1Q9NRF2 756 aaPredicted RBP11.8□□□□□ -0.52
NKIRAS2-203ENST00000393879 CRB1P82279 1406 aa11.8□□□□□ -0.52
NKIRAS2-203ENST00000393879 HSPA2P54652 639 aa11.8□□□□□ -0.52
NKIRAS2-203ENST00000393879 BEND3Q5T5X7 828 aa11.8□□□□□ -0.52
NKIRAS2-203ENST00000393879 SYCE3A1L190 88 aa11.79□□□□□ -0.52
NKIRAS2-203ENST00000393879 FKBP4Q02790 459 aaKnown RBP eCLIP11.79□□□□□ -0.52
NKIRAS2-203ENST00000393879 SLC52A2Q9HAB3 445 aa11.79□□□□□ -0.52
NKIRAS2-203ENST00000393879 MARF1Q9Y4F3 1742 aaKnown RBP11.79□□□□□ -0.52
NKIRAS2-203ENST00000393879 CNNM1Q9NRU3 951 aa11.79□□□□□ -0.52
NKIRAS2-203ENST00000393879 CWC25Q9NXE8 425 aaPredicted RBP11.79□□□□□ -0.52
NKIRAS2-203ENST00000393879 LETM1O95202 739 aaPredicted RBP11.79□□□□□ -0.52
NKIRAS2-203ENST00000393879 STARD3NLO95772 234 aa11.79□□□□□ -0.52
NKIRAS2-203ENST00000393879 C3P01024 1663 aa11.79□□□□□ -0.52
NKIRAS2-203ENST00000393879 CD2BP2O95400 341 aaKnown RBP11.78□□□□□ -0.52
NKIRAS2-203ENST00000393879 CPLX2Q6PUV4 134 aaKnown RBP11.78□□□□□ -0.52
NKIRAS2-203ENST00000393879 CHAF1AQ13111 956 aaPredicted RBP11.78□□□□□ -0.52
NKIRAS2-203ENST00000393879 KDRP35968 1356 aa11.78□□□□□ -0.52
NKIRAS2-203ENST00000393879 FAM177BA6PVY3 158 aa11.78□□□□□ -0.52
NKIRAS2-203ENST00000393879 KRT85P78386 507 aa11.78□□□□□ -0.52
NKIRAS2-203ENST00000393879 PANK2Q9BZ23 570 aa11.78□□□□□ -0.52
NKIRAS2-203ENST00000393879 GDPD2Q9HCC8 539 aa11.78□□□□□ -0.52
NKIRAS2-203ENST00000393879 LMBR1LQ6UX01 489 aa11.77□□□□□ -0.52
NKIRAS2-203ENST00000393879 SUCLG2Q96I99 432 aa11.77□□□□□ -0.52
NKIRAS2-203ENST00000393879 ZNF496Q96IT1 587 aaPredicted RBP11.77□□□□□ -0.52
NKIRAS2-203ENST00000393879 ESPNB1AK53 854 aa11.77□□□□□ -0.53
NKIRAS2-203ENST00000393879 SGSM2O43147 1006 aa11.77□□□□□ -0.53
NKIRAS2-203ENST00000393879 RBM8AQ9Y5S9 174 aaKnown RBP11.77□□□□□ -0.53
NKIRAS2-203ENST00000393879 MON2Q7Z3U7 1717 aa11.77□□□□□ -0.53
NKIRAS2-203ENST00000393879 NALCNQ8IZF0 1738 aa11.77□□□□□ -0.53
NKIRAS2-203ENST00000393879 DIP2AQ14689 1571 aa11.77□□□□□ -0.53
NKIRAS2-203ENST00000393879 IFIT1P09914 478 aaKnown RBP11.77□□□□□ -0.53
NKIRAS2-203ENST00000393879 AEBP2Q6ZN18 517 aaPredicted RBP11.77□□□□□ -0.53
NKIRAS2-203ENST00000393879 INTS4Q96HW7 963 aaKnown RBP11.77□□□□□ -0.53
NKIRAS2-203ENST00000393879 ADAMTSL3P82987 1691 aa11.76□□□□□ -0.53
NKIRAS2-203ENST00000393879 STX6O43752 255 aa11.76□□□□□ -0.53
NKIRAS2-203ENST00000393879 NRDCO43847 1150 aa11.76□□□□□ -0.53
NKIRAS2-203ENST00000393879 METTL22Q9BUU2 404 aaPredicted RBP11.76□□□□□ -0.53
NKIRAS2-203ENST00000393879 STAP2Q9UGK3 403 aa11.76□□□□□ -0.53
NKIRAS2-203ENST00000393879 PDIA4P13667 645 aaKnown RBP11.76□□□□□ -0.53
NKIRAS2-203ENST00000393879 FERMT3Q86UX7 667 aa11.76□□□□□ -0.53
NKIRAS2-203ENST00000393879 RBM27Q9P2N5 1060 aaKnown RBP11.76□□□□□ -0.53
NKIRAS2-203ENST00000393879 KAT6BQ8WYB5 2073 aa11.76□□□□□ -0.53
NKIRAS2-203ENST00000393879 NMIQ13287 307 aaPredicted RBP11.75□□□□□ -0.53
NKIRAS2-203ENST00000393879 PROSER3Q2NL68 480 aa11.75□□□□□ -0.53
NKIRAS2-203ENST00000393879 TBC1D2BQ9UPU7 963 aa11.75□□□□□ -0.53
NKIRAS2-203ENST00000393879 ADGRL3Q9HAR2 1447 aa11.75□□□□□ -0.53
NKIRAS2-203ENST00000393879 PHKG2P15735 406 aa11.75□□□□□ -0.53
NKIRAS2-203ENST00000393879 GJB2P29033 226 aa11.75□□□□□ -0.53
NKIRAS2-203ENST00000393879 SYNE3Q6ZMZ3 975 aa11.75□□□□□ -0.53
NKIRAS2-203ENST00000393879 KLHDC4Q8TBB5 520 aa11.75□□□□□ -0.53
NKIRAS2-203ENST00000393879 GOLGA6L19H0YKK7 550 aa11.75□□□□□ -0.53
NKIRAS2-203ENST00000393879 AK2P54819 239 aa11.75□□□□□ -0.53
NKIRAS2-203ENST00000393879 ZSCAN23Q3MJ62 389 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms