RNA–Protein interactions for RNA: ENST00000393560.5

LAMB1-203, Transcript of laminin subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene LAMB1, Length 2,806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-203ENST00000393560 LMAN1P49257 510 aa13.41□□□□□ -0.26
LAMB1-203ENST00000393560 HDGFL1Q5TGJ6 251 aa13.41□□□□□ -0.26
LAMB1-203ENST00000393560 CLEC17AQ6ZS10 378 aa13.41□□□□□ -0.26
LAMB1-203ENST00000393560 TEX11Q8IYF3 940 aa13.41□□□□□ -0.26
LAMB1-203ENST00000393560 KCNF1Q9H3M0 494 aa13.41□□□□□ -0.26
LAMB1-203ENST00000393560 ZSCAN16Q9H4T2 348 aaPredicted RBP13.41□□□□□ -0.26
LAMB1-203ENST00000393560 DMRT2Q9Y5R5 561 aa13.41□□□□□ -0.26
LAMB1-203ENST00000393560 NEO1Q92859 1461 aa13.41□□□□□ -0.26
LAMB1-203ENST00000393560 NAT1P18440 290 aa13.41□□□□□ -0.26
LAMB1-203ENST00000393560 ELF1P32519 619 aa13.41□□□□□ -0.26
LAMB1-203ENST00000393560 RPS6KA3P51812 740 aa13.41□□□□□ -0.26
LAMB1-203ENST00000393560 CFAP70Q5T0N1 1121 aa13.41□□□□□ -0.26
LAMB1-203ENST00000393560 GET4Q7L5D6 327 aaPredicted RBP13.41□□□□□ -0.26
LAMB1-203ENST00000393560 MKL1Q969V6 931 aa13.41□□□□□ -0.26
LAMB1-203ENST00000393560 BCL2L13Q9BXK5 485 aa13.41□□□□□ -0.26
LAMB1-203ENST00000393560 GNL3LQ9NVN8 582 aaKnown RBP13.41□□□□□ -0.26
LAMB1-203ENST00000393560 PHF8Q9UPP1 1060 aa13.41□□□□□ -0.26
LAMB1-203ENST00000393560 FRMPD1Q5SYB0 1578 aa13.41□□□□□ -0.26
LAMB1-203ENST00000393560 VWDEQ8N2E2 1590 aa13.41□□□□□ -0.26
LAMB1-203ENST00000393560 CFAP74Q9C0B2 1584 aa13.41□□□□□ -0.26
LAMB1-203ENST00000393560 HECW2Q9P2P5 1572 aa13.41□□□□□ -0.26
LAMB1-203ENST00000393560 PNMA6AP0CW24 399 aaPredicted RBP13.4□□□□□ -0.26
LAMB1-203ENST00000393560 CD151P48509 253 aa13.4□□□□□ -0.26
LAMB1-203ENST00000393560 SNX21Q969T3 373 aa13.4□□□□□ -0.26
LAMB1-203ENST00000393560 TESK2Q96S53 571 aa13.4□□□□□ -0.26
LAMB1-203ENST00000393560 TSPYL2Q9H2G4 693 aaPredicted RBP13.4□□□□□ -0.26
LAMB1-203ENST00000393560 TSPOAP1O95153 1857 aa13.4□□□□□ -0.26
LAMB1-203ENST00000393560 ADGRF5Q8IZF2 1346 aa13.4□□□□□ -0.26
LAMB1-203ENST00000393560 HTATSF1O43719 755 aaKnown RBP13.4□□□□□ -0.26
LAMB1-203ENST00000393560 ANKRD45Q5TZF3 282 aa13.4□□□□□ -0.26
LAMB1-203ENST00000393560 CPLX2Q6PUV4 134 aaKnown RBP13.4□□□□□ -0.26
LAMB1-203ENST00000393560 ARL10Q8N8L6 244 aa13.4□□□□□ -0.26
LAMB1-203ENST00000393560 AK7Q96M32 723 aa13.4□□□□□ -0.26
LAMB1-203ENST00000393560 SPATS2LQ9NUQ6 558 aaKnown RBP13.4□□□□□ -0.26
LAMB1-203ENST00000393560 RRP7AQ9Y3A4 280 aaKnown RBP13.4□□□□□ -0.26
LAMB1-203ENST00000393560 PCDHGA4Q9Y5G9 962 aa13.4□□□□□ -0.26
LAMB1-203ENST00000393560 ABCA6Q8N139 1617 aa13.4□□□□□ -0.26
LAMB1-203ENST00000393560 CORO7P57737 925 aa13.4□□□□□ -0.27
LAMB1-203ENST00000393560 JPH2Q9BR39 696 aaPredicted RBP13.4□□□□□ -0.27
LAMB1-203ENST00000393560 CEP152O94986 1710 aa13.39□□□□□ -0.27
LAMB1-203ENST00000393560 ACTN2P35609 894 aa13.39□□□□□ -0.27
LAMB1-203ENST00000393560 PLEKHO1Q53GL0 409 aaPredicted RBP13.39□□□□□ -0.27
LAMB1-203ENST00000393560 MYLK4Q86YV6 388 aaPredicted RBP13.39□□□□□ -0.27
LAMB1-203ENST00000393560 VEZTQ9HBM0 779 aa13.39□□□□□ -0.27
LAMB1-203ENST00000393560 EIF2AK4Q9P2K8 1649 aaKnown RBP13.39□□□□□ -0.27
LAMB1-203ENST00000393560 GPRASP1Q5JY77 1395 aa13.39□□□□□ -0.27
LAMB1-203ENST00000393560 PYGLP06737 847 aa13.39□□□□□ -0.27
LAMB1-203ENST00000393560 SETSIPP0DME0 302 aa13.39□□□□□ -0.27
LAMB1-203ENST00000393560 FOXR1Q6PIV2 292 aa13.39□□□□□ -0.27
LAMB1-203ENST00000393560 N4BP2L2Q92802 583 aaPredicted RBP13.39□□□□□ -0.27
LAMB1-203ENST00000393560 CHCHD3Q9NX63 227 aaKnown RBP13.39□□□□□ -0.27
LAMB1-203ENST00000393560 NSFL1CQ9UNZ2 370 aaKnown RBP13.39□□□□□ -0.27
LAMB1-203ENST00000393560 PARD3Q8TEW0 1356 aa13.38□□□□□ -0.27
LAMB1-203ENST00000393560 NPATQ14207 1427 aa13.38□□□□□ -0.27
LAMB1-203ENST00000393560 CPP00450 1065 aa13.38□□□□□ -0.27
LAMB1-203ENST00000393560 ZRSR1Q15695 479 aaKnown RBP13.38□□□□□ -0.27
LAMB1-203ENST00000393560 LRRC31Q6UY01 552 aa13.38□□□□□ -0.27
LAMB1-203ENST00000393560 TNNQ9UQP3 1299 aa13.38□□□□□ -0.27
LAMB1-203ENST00000393560 PPRC1Q5VV67 1664 aaKnown RBP13.38□□□□□ -0.27
LAMB1-203ENST00000393560 MAGEA8P43361 318 aa13.38□□□□□ -0.27
LAMB1-203ENST00000393560 GRIK3Q13003 919 aa13.38□□□□□ -0.27
LAMB1-203ENST00000393560 IQUBQ8NA54 791 aa13.38□□□□□ -0.27
LAMB1-203ENST00000393560 CTCFLQ8NI51 663 aaPredicted RBP13.38□□□□□ -0.27
LAMB1-203ENST00000393560 KCNV2Q8TDN2 545 aa13.38□□□□□ -0.27
LAMB1-203ENST00000393560 EFCAB6Q5THR3 1501 aa13.37□□□□□ -0.27
LAMB1-203ENST00000393560 RBM47A0AV96 593 aaKnown RBP13.37□□□□□ -0.27
LAMB1-203ENST00000393560 IVLP07476 585 aa13.37□□□□□ -0.27
LAMB1-203ENST00000393560 AMOTQ4VCS5 1084 aa13.37□□□□□ -0.27
LAMB1-203ENST00000393560 LEKR1Q6ZMV7 388 aa13.37□□□□□ -0.27
LAMB1-203ENST00000393560 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.37□□□□□ -0.27
LAMB1-203ENST00000393560 MRFAP1L1Q96HT8 127 aa13.37□□□□□ -0.27
LAMB1-203ENST00000393560 RANBP17Q9H2T7 1088 aaKnown RBP13.37□□□□□ -0.27
LAMB1-203ENST00000393560 SOS1Q07889 1333 aaPredicted RBP13.37□□□□□ -0.27
LAMB1-203ENST00000393560 PDE6BP35913 854 aa13.37□□□□□ -0.27
LAMB1-203ENST00000393560 WDR43Q15061 677 aaKnown RBP eCLIP13.37□□□□□ -0.27
LAMB1-203ENST00000393560 RBBP5Q15291 538 aaKnown RBP13.37□□□□□ -0.27
LAMB1-203ENST00000393560 SLFNL1Q499Z3 407 aa13.37□□□□□ -0.27
LAMB1-203ENST00000393560 REXO1L1PQ8IX06 675 aa13.37□□□□□ -0.27
LAMB1-203ENST00000393560 ARMC2Q8NEN0 867 aa13.37□□□□□ -0.27
LAMB1-203ENST00000393560 MICAL1Q8TDZ2 1067 aa13.37□□□□□ -0.27
LAMB1-203ENST00000393560 PARD3BQ8TEW8 1205 aa13.37□□□□□ -0.27
LAMB1-203ENST00000393560 KIF2CQ99661 725 aa13.37□□□□□ -0.27
LAMB1-203ENST00000393560 TMEM165Q9HC07 324 aa13.37□□□□□ -0.27
LAMB1-203ENST00000393560 PLEKHH1Q9ULM0 1364 aa13.37□□□□□ -0.27
LAMB1-203ENST00000393560 APAF1O14727 1248 aa13.36□□□□□ -0.27
LAMB1-203ENST00000393560 BLOC1S6Q9UL45 172 aa13.36□□□□□ -0.27
LAMB1-203ENST00000393560 GCFC2P16383 781 aaKnown RBP13.36□□□□□ -0.27
LAMB1-203ENST00000393560 HHATQ5VTY9 493 aa13.36□□□□□ -0.27
LAMB1-203ENST00000393560 SPC24Q8NBT2 197 aa13.36□□□□□ -0.27
LAMB1-203ENST00000393560 YIPF2Q9BWQ6 316 aa13.36□□□□□ -0.27
LAMB1-203ENST00000393560 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.36□□□□□ -0.27
LAMB1-203ENST00000393560 MAP3K4Q9Y6R4 1608 aa13.36□□□□□ -0.27
LAMB1-203ENST00000393560 SNUPNO95149 360 aaKnown RBP13.35□□□□□ -0.27
LAMB1-203ENST00000393560 HNRNPH1P31943 449 aaKnown RBP13.35□□□□□ -0.27
LAMB1-203ENST00000393560 TMF1P82094 1093 aa13.35□□□□□ -0.27
LAMB1-203ENST00000393560 TADA2BQ86TJ2 420 aa13.35□□□□□ -0.27
LAMB1-203ENST00000393560 PANK1Q8TE04 598 aa13.35□□□□□ -0.27
LAMB1-203ENST00000393560 CLUAP1Q96AJ1 413 aa13.35□□□□□ -0.27
LAMB1-203ENST00000393560 IL16Q14005 1332 aa13.35□□□□□ -0.27
LAMB1-203ENST00000393560 EIF3JO75822 258 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms