RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 ERVV-1B6SEH8 477 aa24.53■■□□□ 1.52
PDLIM7-204ENST00000393546 LRP10Q7Z4F1 713 aa24.53■■□□□ 1.52
PDLIM7-204ENST00000393546 TSPYL6Q8N831 410 aa24.53■■□□□ 1.52
PDLIM7-204ENST00000393546 SPINK5Q9NQ38 1064 aaPredicted RBP24.53■■□□□ 1.52
PDLIM7-204ENST00000393546 TWISTNBQ3B726 338 aaPredicted RBP24.52■■□□□ 1.52
PDLIM7-204ENST00000393546 CCDC30Q5VVM6 783 aa24.52■■□□□ 1.52
PDLIM7-204ENST00000393546 SETDB2Q96T68 719 aa24.52■■□□□ 1.52
PDLIM7-204ENST00000393546 MAP3K15Q6ZN16 1313 aa24.52■■□□□ 1.52
PDLIM7-204ENST00000393546 SCN7AQ01118 1682 aa24.51■■□□□ 1.51
PDLIM7-204ENST00000393546 SERPINB2P05120 415 aa24.51■■□□□ 1.51
PDLIM7-204ENST00000393546 COPS6Q7L5N1 327 aa24.51■■□□□ 1.51
PDLIM7-204ENST00000393546 HYPKQ9NX55 129 aa24.51■■□□□ 1.51
PDLIM7-204ENST00000393546 AIMP1Q12904 312 aaKnown RBP24.5■■□□□ 1.51
PDLIM7-204ENST00000393546 HLFQ16534 295 aa24.5■■□□□ 1.51
PDLIM7-204ENST00000393546 XAGE3Q8WTP9 111 aa24.5■■□□□ 1.51
PDLIM7-204ENST00000393546 DCAF8L1A6NGE4 600 aa24.49■■□□□ 1.51
PDLIM7-204ENST00000393546 EXOSC9Q06265 439 aaKnown RBP24.49■■□□□ 1.51
PDLIM7-204ENST00000393546 ZBTB3Q9H5J0 574 aa24.49■■□□□ 1.51
PDLIM7-204ENST00000393546 BCORQ6W2J9 1755 aa24.49■■□□□ 1.51
PDLIM7-204ENST00000393546 E9PSI1 815 aa24.48■■□□□ 1.51
PDLIM7-204ENST00000393546 NLGN2Q8NFZ4 835 aa24.48■■□□□ 1.51
PDLIM7-204ENST00000393546 CARMIL3Q8ND23 1372 aa24.47■■□□□ 1.51
PDLIM7-204ENST00000393546 NIP7Q9Y221 180 aaKnown RBP eCLIP24.47■■□□□ 1.51
PDLIM7-204ENST00000393546 TGFB2P61812 414 aa24.46■■□□□ 1.51
PDLIM7-204ENST00000393546 GIGYF2Q6Y7W6 1299 aaKnown RBP24.46■■□□□ 1.51
PDLIM7-204ENST00000393546 STK31Q9BXU1 1019 aa24.46■■□□□ 1.51
PDLIM7-204ENST00000393546 C10orf71Q711Q0 1435 aa24.44■■□□□ 1.5
PDLIM7-204ENST00000393546 NPHP1O15259 732 aa24.44■■□□□ 1.5
PDLIM7-204ENST00000393546 VAMP4O75379 141 aa24.44■■□□□ 1.5
PDLIM7-204ENST00000393546 SLFN5Q08AF3 891 aa24.44■■□□□ 1.5
PDLIM7-204ENST00000393546 NUP98P52948 1817 aa24.43■■□□□ 1.5
PDLIM7-204ENST00000393546 AFDNP55196 1824 aaKnown RBP24.43■■□□□ 1.5
PDLIM7-204ENST00000393546 ANKRD13DQ6ZTN6 518 aa24.43■■□□□ 1.5
PDLIM7-204ENST00000393546 HNRNPUQ00839 825 aaKnown RBP eCLIP24.42■■□□□ 1.5
PDLIM7-204ENST00000393546 HSP90AB3PQ58FF7 597 aa24.42■■□□□ 1.5
PDLIM7-204ENST00000393546 NBPF5PQ86XG9 351 aaPredicted RBP24.42■■□□□ 1.5
PDLIM7-204ENST00000393546 KIF13BQ9NQT8 1826 aa24.41■■□□□ 1.5
PDLIM7-204ENST00000393546 TCERG1O14776 1098 aaKnown RBP24.41■■□□□ 1.5
PDLIM7-204ENST00000393546 TPTE2Q6XPS3 522 aa24.41■■□□□ 1.5
PDLIM7-204ENST00000393546 CNBD1Q8NA66 436 aa24.41■■□□□ 1.5
PDLIM7-204ENST00000393546 PLBD2Q8NHP8 589 aa24.41■■□□□ 1.5
PDLIM7-204ENST00000393546 CDCA7LQ96GN5 454 aa24.41■■□□□ 1.5
PDLIM7-204ENST00000393546 PHAXQ9H814 394 aaKnown RBP24.41■■□□□ 1.5
PDLIM7-204ENST00000393546 A0A0G2JLW4 131 aa24.4■■□□□ 1.5
PDLIM7-204ENST00000393546 GPTP24298 496 aa24.4■■□□□ 1.5
PDLIM7-204ENST00000393546 PRR5LQ6MZQ0 368 aa24.4■■□□□ 1.5
PDLIM7-204ENST00000393546 ZNF34Q8IZ26 560 aa24.4■■□□□ 1.5
PDLIM7-204ENST00000393546 NRXN2Q9P2S2 1712 aa24.4■■□□□ 1.5
PDLIM7-204ENST00000393546 ATP10DQ9P241 1426 aa24.39■■□□□ 1.5
PDLIM7-204ENST00000393546 FAM177BA6PVY3 158 aa24.39■■□□□ 1.49
PDLIM7-204ENST00000393546 SLC4A2P04920 1241 aa24.39■■□□□ 1.49
PDLIM7-204ENST00000393546 ST5P78524 1137 aa24.39■■□□□ 1.49
PDLIM7-204ENST00000393546 GPR162Q16538 588 aa24.39■■□□□ 1.49
PDLIM7-204ENST00000393546 PELP1Q8IZL8 1130 aaKnown RBP24.39■■□□□ 1.49
PDLIM7-204ENST00000393546 DDX58O95786 925 aaKnown RBP24.38■■□□□ 1.49
PDLIM7-204ENST00000393546 DPEP1P16444 411 aa24.38■■□□□ 1.49
PDLIM7-204ENST00000393546 GTF2E1P29083 439 aaPredicted RBP24.38■■□□□ 1.49
PDLIM7-204ENST00000393546 TCIRG1Q13488 830 aa24.38■■□□□ 1.49
PDLIM7-204ENST00000393546 PARP10Q53GL7 1025 aa24.38■■□□□ 1.49
PDLIM7-204ENST00000393546 RIC3Q7Z5B4 369 aa24.38■■□□□ 1.49
PDLIM7-204ENST00000393546 BRIP1Q9BX63 1249 aa24.38■■□□□ 1.49
PDLIM7-204ENST00000393546 NYXQ9GZU5 481 aa24.38■■□□□ 1.49
PDLIM7-204ENST00000393546 TRMT2AQ8IZ69 625 aaKnown RBP24.37■■□□□ 1.49
PDLIM7-204ENST00000393546 CCDC24Q8N4L8 307 aa24.37■■□□□ 1.49
PDLIM7-204ENST00000393546 PDE6BP35913 854 aa24.36■■□□□ 1.49
PDLIM7-204ENST00000393546 PPP1R42Q7Z4L9 355 aa24.36■■□□□ 1.49
PDLIM7-204ENST00000393546 PXDNLA1KZ92 1463 aa24.35■■□□□ 1.49
PDLIM7-204ENST00000393546 SUSD4Q5VX71 490 aa24.35■■□□□ 1.49
PDLIM7-204ENST00000393546 PDZRN3Q9UPQ7 1066 aa24.35■■□□□ 1.49
PDLIM7-204ENST00000393546 UBN2Q6ZU65 1347 aa24.35■■□□□ 1.49
PDLIM7-204ENST00000393546 N4BP2Q86UW6 1770 aaPredicted RBP24.34■■□□□ 1.49
PDLIM7-204ENST00000393546 CACNA1FO60840 1977 aa24.33■■□□□ 1.49
PDLIM7-204ENST00000393546 H0YIN7 160 aa24.33■■□□□ 1.49
PDLIM7-204ENST00000393546 KCNA3P22001 575 aa24.33■■□□□ 1.49
PDLIM7-204ENST00000393546 CHRNA5P30532 468 aa24.33■■□□□ 1.49
PDLIM7-204ENST00000393546 C2CD5Q86YS7 1000 aa24.33■■□□□ 1.49
PDLIM7-204ENST00000393546 PIM2Q9P1W9 311 aa24.33■■□□□ 1.49
PDLIM7-204ENST00000393546 KSR2Q6VAB6 950 aa24.32■■□□□ 1.48
PDLIM7-204ENST00000393546 G2E3Q7L622 706 aa24.32■■□□□ 1.48
PDLIM7-204ENST00000393546 NLRP10Q86W26 655 aa24.32■■□□□ 1.48
PDLIM7-204ENST00000393546 UTP14AQ9BVJ6 771 aaKnown RBP24.32■■□□□ 1.48
PDLIM7-204ENST00000393546 WWC3Q9ULE0 1092 aa24.32■■□□□ 1.48
PDLIM7-204ENST00000393546 IBTKQ9P2D0 1353 aaPredicted RBP24.3■■□□□ 1.48
PDLIM7-204ENST00000393546 KIAA1551Q9HCM1 1747 aa24.3■■□□□ 1.48
PDLIM7-204ENST00000393546 PI4KAP2A4QPH2 592 aa24.3■■□□□ 1.48
PDLIM7-204ENST00000393546 GRIN3BO60391 1043 aa24.3■■□□□ 1.48
PDLIM7-204ENST00000393546 FLIIQ13045 1269 aa24.3■■□□□ 1.48
PDLIM7-204ENST00000393546 NUTM1Q86Y26 1132 aa24.3■■□□□ 1.48
PDLIM7-204ENST00000393546 PI4KAP1Q8N8J0 262 aa24.3■■□□□ 1.48
PDLIM7-204ENST00000393546 ISCA1Q9BUE6 129 aa24.3■■□□□ 1.48
PDLIM7-204ENST00000393546 ATP5J2-PTCD1G3V325 749 aa24.29■■□□□ 1.48
PDLIM7-204ENST00000393546 NTSR2O95665 410 aa24.29■■□□□ 1.48
PDLIM7-204ENST00000393546 YBX3P16989 372 aaKnown RBP eCLIP24.29■■□□□ 1.48
PDLIM7-204ENST00000393546 TRIM28Q13263 835 aaKnown RBP24.29■■□□□ 1.48
PDLIM7-204ENST00000393546 ERFEQ4G0M1 354 aa24.29■■□□□ 1.48
PDLIM7-204ENST00000393546 ZNF428Q96B54 188 aa24.29■■□□□ 1.48
PDLIM7-204ENST00000393546 METTL22Q9BUU2 404 aaPredicted RBP24.29■■□□□ 1.48
PDLIM7-204ENST00000393546 BCS1LQ9Y276 419 aa24.29■■□□□ 1.48
PDLIM7-204ENST00000393546 MAP3K2Q9Y2U5 619 aa24.29■■□□□ 1.48
PDLIM7-204ENST00000393546 ANKRD36CQ5JPF3 1778 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 160.6 ms