RNA–Protein interactions for RNA: ENST00000393405.6

SNX11-202, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNX11, Length 2,733 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-202ENST00000393405 PRIMPOLQ96LW4 560 aa18.38■□□□□ 0.53
SNX11-202ENST00000393405 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.38■□□□□ 0.53
SNX11-202ENST00000393405 ADCY9O60503 1353 aa18.38■□□□□ 0.53
SNX11-202ENST00000393405 LMO7Q8WWI1 1683 aa18.38■□□□□ 0.53
SNX11-202ENST00000393405 HOXB7P09629 217 aa18.37■□□□□ 0.53
SNX11-202ENST00000393405 CBX1P83916 185 aa18.37■□□□□ 0.53
SNX11-202ENST00000393405 PXDNQ92626 1479 aa18.37■□□□□ 0.53
SNX11-202ENST00000393405 BTBD11A6QL63 1104 aa18.37■□□□□ 0.53
SNX11-202ENST00000393405 KIF1BPQ96EK5 621 aa18.37■□□□□ 0.53
SNX11-202ENST00000393405 EPB41L2O43491 1005 aaKnown RBP18.36■□□□□ 0.53
SNX11-202ENST00000393405 HSPA4P34932 840 aa18.36■□□□□ 0.53
SNX11-202ENST00000393405 HMGN5P82970 282 aaKnown RBP18.36■□□□□ 0.53
SNX11-202ENST00000393405 AKAP4Q5JQC9 854 aa18.36■□□□□ 0.53
SNX11-202ENST00000393405 FAM177BA6PVY3 158 aa18.35■□□□□ 0.53
SNX11-202ENST00000393405 ZNF710Q8N1W2 664 aa18.35■□□□□ 0.53
SNX11-202ENST00000393405 MPNDQ8N594 471 aa18.35■□□□□ 0.53
SNX11-202ENST00000393405 TMEM87AQ8NBN3 555 aa18.35■□□□□ 0.53
SNX11-202ENST00000393405 PIBF1Q8WXW3 757 aa18.35■□□□□ 0.53
SNX11-202ENST00000393405 GTF2F1P35269 517 aaKnown RBP eCLIP18.35■□□□□ 0.53
SNX11-202ENST00000393405 KCNH5Q8NCM2 988 aa18.35■□□□□ 0.53
SNX11-202ENST00000393405 WDR33Q9C0J8 1336 aaKnown RBP18.34■□□□□ 0.53
SNX11-202ENST00000393405 SGSM2O43147 1006 aa18.34■□□□□ 0.53
SNX11-202ENST00000393405 PHRF1Q9P1Y6 1649 aaKnown RBP18.34■□□□□ 0.53
SNX11-202ENST00000393405 TCHHQ07283 1943 aa18.34■□□□□ 0.53
SNX11-202ENST00000393405 RAD50Q92878 1312 aa18.34■□□□□ 0.53
SNX11-202ENST00000393405 PROSER3Q2NL68 480 aa18.34■□□□□ 0.53
SNX11-202ENST00000393405 ANKLE2Q86XL3 938 aa18.34■□□□□ 0.53
SNX11-202ENST00000393405 ADGRL3Q9HAR2 1447 aa18.34■□□□□ 0.53
SNX11-202ENST00000393405 PLEKHO1Q53GL0 409 aaPredicted RBP18.33■□□□□ 0.53
SNX11-202ENST00000393405 PRAMEF22A3QJZ6 481 aa18.33■□□□□ 0.52
SNX11-202ENST00000393405 LETM1O95202 739 aaPredicted RBP18.33■□□□□ 0.52
SNX11-202ENST00000393405 RNMTO43148 476 aaKnown RBP18.32■□□□□ 0.52
SNX11-202ENST00000393405 DNTTIP2Q5QJE6 756 aaKnown RBP18.32■□□□□ 0.52
SNX11-202ENST00000393405 BBXQ8WY36 941 aaPredicted RBP18.32■□□□□ 0.52
SNX11-202ENST00000393405 ORAI2Q96SN7 254 aa18.32■□□□□ 0.52
SNX11-202ENST00000393405 DBF4Q9UBU7 674 aaPredicted RBP18.32■□□□□ 0.52
SNX11-202ENST00000393405 GCP02774 474 aa18.31■□□□□ 0.52
SNX11-202ENST00000393405 ATP2B3Q16720 1220 aa18.31■□□□□ 0.52
SNX11-202ENST00000393405 CNTROBQ8N137 903 aa18.31■□□□□ 0.52
SNX11-202ENST00000393405 LSG1Q9H089 658 aaKnown RBP18.31■□□□□ 0.52
SNX11-202ENST00000393405 MAP3K2Q9Y2U5 619 aa18.31■□□□□ 0.52
SNX11-202ENST00000393405 CRYBG1Q9Y4K1 1723 aa18.31■□□□□ 0.52
SNX11-202ENST00000393405 OS9Q13438 667 aaPredicted RBP18.31■□□□□ 0.52
SNX11-202ENST00000393405 FOXD4L6Q3SYB3 417 aaPredicted RBP18.31■□□□□ 0.52
SNX11-202ENST00000393405 PPP4R3BQ5MIZ7 849 aa18.31■□□□□ 0.52
SNX11-202ENST00000393405 CCDC183Q5T5S1 534 aa18.31■□□□□ 0.52
SNX11-202ENST00000393405 CWC27Q6UX04 472 aaKnown RBP18.31■□□□□ 0.52
SNX11-202ENST00000393405 FOXD4L3Q6VB84 417 aaPredicted RBP18.31■□□□□ 0.52
SNX11-202ENST00000393405 ARHGEF25Q86VW2 580 aa18.31■□□□□ 0.52
SNX11-202ENST00000393405 RASEFQ8IZ41 740 aa18.31■□□□□ 0.52
SNX11-202ENST00000393405 SNX14Q9Y5W7 946 aa18.31■□□□□ 0.52
SNX11-202ENST00000393405 SPG7Q9UQ90 795 aa18.3■□□□□ 0.52
SNX11-202ENST00000393405 GIGYF1O75420 1035 aaPredicted RBP18.3■□□□□ 0.52
SNX11-202ENST00000393405 CWF19L2Q2TBE0 894 aaKnown RBP18.3■□□□□ 0.52
SNX11-202ENST00000393405 C1orf141Q5JVX7 400 aa18.3■□□□□ 0.52
SNX11-202ENST00000393405 USP48Q86UV5 1035 aa18.3■□□□□ 0.52
SNX11-202ENST00000393405 SPTLC3Q9NUV7 552 aa18.3■□□□□ 0.52
SNX11-202ENST00000393405 PA2G4Q9UQ80 394 aaKnown RBP18.3■□□□□ 0.52
SNX11-202ENST00000393405 MTX1Q13505 466 aa18.29■□□□□ 0.52
SNX11-202ENST00000393405 NOLC1Q14978 699 aaKnown RBP eCLIP18.29■□□□□ 0.52
SNX11-202ENST00000393405 AMOTQ4VCS5 1084 aa18.29■□□□□ 0.52
SNX11-202ENST00000393405 HSP90AB4PQ58FF6 505 aa18.29■□□□□ 0.52
SNX11-202ENST00000393405 LMOD2Q6P5Q4 547 aa18.29■□□□□ 0.52
SNX11-202ENST00000393405 LARP6Q9BRS8 491 aaKnown RBP18.29■□□□□ 0.52
SNX11-202ENST00000393405 CHMP4AQ9BY43 222 aa18.29■□□□□ 0.52
SNX11-202ENST00000393405 RPAP1Q9BWH6 1393 aaPredicted RBP18.29■□□□□ 0.52
SNX11-202ENST00000393405 GADD45BO75293 160 aaPredicted RBP18.29■□□□□ 0.52
SNX11-202ENST00000393405 GDPD2Q9HCC8 539 aa18.29■□□□□ 0.52
SNX11-202ENST00000393405 C9orf78Q9NZ63 289 aaPredicted RBP18.29■□□□□ 0.52
SNX11-202ENST00000393405 USP42Q9H9J4 1324 aaKnown RBP18.28■□□□□ 0.52
SNX11-202ENST00000393405 NCAPD2Q15021 1401 aa18.28■□□□□ 0.52
SNX11-202ENST00000393405 GTF2E1P29083 439 aaPredicted RBP18.28■□□□□ 0.52
SNX11-202ENST00000393405 ANKRD24Q8TF21 1146 aa18.28■□□□□ 0.52
SNX11-202ENST00000393405 TTC14Q96N46 770 aa18.28■□□□□ 0.52
SNX11-202ENST00000393405 ZNF830Q96NB3 372 aaPredicted RBP18.28■□□□□ 0.52
SNX11-202ENST00000393405 AXIN2Q9Y2T1 843 aa18.28■□□□□ 0.52
SNX11-202ENST00000393405 GLRX3O76003 335 aaKnown RBP18.27■□□□□ 0.52
SNX11-202ENST00000393405 C17orf53Q8N3J3 647 aaPredicted RBP18.27■□□□□ 0.52
SNX11-202ENST00000393405 TTC41PQ6P2S7 1318 aa18.27■□□□□ 0.52
SNX11-202ENST00000393405 HEG1Q9ULI3 1381 aa18.27■□□□□ 0.52
SNX11-202ENST00000393405 PDE4CQ08493 712 aa18.27■□□□□ 0.51
SNX11-202ENST00000393405 KSR2Q6VAB6 950 aa18.27■□□□□ 0.51
SNX11-202ENST00000393405 CLASRPQ8N2M8 674 aaKnown RBP18.27■□□□□ 0.51
SNX11-202ENST00000393405 IGSF3O75054 1194 aa18.26■□□□□ 0.51
SNX11-202ENST00000393405 CPA1P15085 419 aa18.26■□□□□ 0.51
SNX11-202ENST00000393405 AK2P54819 239 aa18.26■□□□□ 0.51
SNX11-202ENST00000393405 SLIT3O75094 1523 aa18.26■□□□□ 0.51
SNX11-202ENST00000393405 ALDH1L1O75891 902 aa18.26■□□□□ 0.51
SNX11-202ENST00000393405 USP25Q9UHP3 1055 aa18.26■□□□□ 0.51
SNX11-202ENST00000393405 SIPA1L3O60292 1781 aaPredicted RBP18.25■□□□□ 0.51
SNX11-202ENST00000393405 RGPD5Q99666 1765 aa18.25■□□□□ 0.51
SNX11-202ENST00000393405 SPDYE4A6NLX3 237 aa18.25■□□□□ 0.51
SNX11-202ENST00000393405 ADCY5O95622 1261 aa18.25■□□□□ 0.51
SNX11-202ENST00000393405 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.25■□□□□ 0.51
SNX11-202ENST00000393405 RUFY3Q7L099 469 aa18.25■□□□□ 0.51
SNX11-202ENST00000393405 UBE2HP62256 183 aa18.24■□□□□ 0.51
SNX11-202ENST00000393405 PTH1RQ03431 593 aa18.24■□□□□ 0.51
SNX11-202ENST00000393405 KAZALD1Q96I82 304 aa18.24■□□□□ 0.51
SNX11-202ENST00000393405 GTPBP4Q9BZE4 634 aaKnown RBP18.24■□□□□ 0.51
SNX11-202ENST00000393405 DIAPH3Q9NSV4 1193 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms