RNA–Protein interactions for RNA: ENST00000393384.3

CRAT-202, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 2 BASIC

Gene CRAT, Length 973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-202ENST00000393384 CARMIL3Q8ND23 1372 aa25.11■■□□□ 1.61
CRAT-202ENST00000393384 PIP4K2AP48426 406 aaPredicted RBP25.11■■□□□ 1.61
CRAT-202ENST00000393384 PRELPP51888 382 aa25.11■■□□□ 1.61
CRAT-202ENST00000393384 THUMPD2Q9BTF0 503 aaKnown RBP25.11■■□□□ 1.61
CRAT-202ENST00000393384 TIAM2Q8IVF5 1701 aa25.09■■□□□ 1.61
CRAT-202ENST00000393384 CCDC88AQ3V6T2 1871 aa25.09■■□□□ 1.61
CRAT-202ENST00000393384 RIPK4P57078 832 aa25.09■■□□□ 1.61
CRAT-202ENST00000393384 NBPF26B4DH59 902 aa25.08■■□□□ 1.61
CRAT-202ENST00000393384 NFKBIEO00221 500 aa25.08■■□□□ 1.61
CRAT-202ENST00000393384 EIF4A1P60842 406 aaKnown RBP25.08■■□□□ 1.61
CRAT-202ENST00000393384 NBPF10Q6P3W6 841 aaKnown RBP25.08■■□□□ 1.61
CRAT-202ENST00000393384 NBPF15Q8N660 670 aa25.08■■□□□ 1.61
CRAT-202ENST00000393384 SETDB2Q96T68 719 aa25.08■■□□□ 1.61
CRAT-202ENST00000393384 PRKRIP1Q9H875 184 aaPredicted RBP25.08■■□□□ 1.61
CRAT-202ENST00000393384 PDE6BP35913 854 aa25.07■■□□□ 1.6
CRAT-202ENST00000393384 ZEB1P37275 1124 aaPredicted RBP25.07■■□□□ 1.6
CRAT-202ENST00000393384 TMPOP42166 694 aaKnown RBP25.07■■□□□ 1.6
CRAT-202ENST00000393384 CLEC4GQ6UXB4 293 aa25.07■■□□□ 1.6
CRAT-202ENST00000393384 BRIP1Q9BX63 1249 aa25.06■■□□□ 1.6
CRAT-202ENST00000393384 PCNTO95613 3336 aa25.06■■□□□ 1.6
CRAT-202ENST00000393384 NUP98P52948 1817 aa25.05■■□□□ 1.6
CRAT-202ENST00000393384 RGL2O15211 777 aa25.05■■□□□ 1.6
CRAT-202ENST00000393384 LMOD3Q0VAK6 560 aa25.05■■□□□ 1.6
CRAT-202ENST00000393384 WDR43Q15061 677 aaKnown RBP eCLIP25.05■■□□□ 1.6
CRAT-202ENST00000393384 COL13A1Q5TAT6 717 aaPredicted RBP25.05■■□□□ 1.6
CRAT-202ENST00000393384 PRR5LQ6MZQ0 368 aa25.05■■□□□ 1.6
CRAT-202ENST00000393384 DPY19L2Q6NUT2 758 aa25.05■■□□□ 1.6
CRAT-202ENST00000393384 ZNF622Q969S3 477 aaKnown RBP eCLIP25.05■■□□□ 1.6
CRAT-202ENST00000393384 ZNF652Q9Y2D9 606 aa25.04■■□□□ 1.6
CRAT-202ENST00000393384 COL11A2P13942 1736 aaPredicted RBP25.03■■□□□ 1.6
CRAT-202ENST00000393384 RUNDC1Q96C34 613 aa25.03■■□□□ 1.6
CRAT-202ENST00000393384 BABAM1Q9NWV8 329 aa25.03■■□□□ 1.6
CRAT-202ENST00000393384 CCDC146Q8IYE0 955 aa25.02■■□□□ 1.6
CRAT-202ENST00000393384 TSPYL4Q9UJ04 414 aa25.02■■□□□ 1.6
CRAT-202ENST00000393384 CACNA1SQ13698 1873 aa25.02■■□□□ 1.6
CRAT-202ENST00000393384 C21orf2O43822 256 aa25.01■■□□□ 1.59
CRAT-202ENST00000393384 CNBD1Q8NA66 436 aa25.01■■□□□ 1.59
CRAT-202ENST00000393384 ADAMTS8Q9UP79 889 aa25.01■■□□□ 1.59
CRAT-202ENST00000393384 DICER1Q9UPY3 1922 aaKnown RBP25.01■■□□□ 1.59
CRAT-202ENST00000393384 FER1L6Q2WGJ9 1857 aa25■■□□□ 1.59
CRAT-202ENST00000393384 POTECB2RU33 542 aa25■■□□□ 1.59
CRAT-202ENST00000393384 ERFEQ4G0M1 354 aa25■■□□□ 1.59
CRAT-202ENST00000393384 NPHP1O15259 732 aa24.99■■□□□ 1.59
CRAT-202ENST00000393384 ST5P78524 1137 aa24.99■■□□□ 1.59
CRAT-202ENST00000393384 CCDC24Q8N4L8 307 aa24.99■■□□□ 1.59
CRAT-202ENST00000393384 LTBP3Q9NS15 1303 aa24.99■■□□□ 1.59
CRAT-202ENST00000393384 RRP7AQ9Y3A4 280 aaKnown RBP24.99■■□□□ 1.59
CRAT-202ENST00000393384 ARFGEF2Q9Y6D5 1785 aa24.99■■□□□ 1.59
CRAT-202ENST00000393384 NEUROD2Q15784 382 aa24.98■■□□□ 1.59
CRAT-202ENST00000393384 CNKSR1Q969H4 720 aa24.98■■□□□ 1.59
CRAT-202ENST00000393384 TAOK3Q9H2K8 898 aa24.98■■□□□ 1.59
CRAT-202ENST00000393384 ZNF219Q9P2Y4 722 aaPredicted RBP24.98■■□□□ 1.59
CRAT-202ENST00000393384 TNS4Q8IZW8 715 aa24.97■■□□□ 1.59
CRAT-202ENST00000393384 ERBB4Q15303 1308 aa24.96■■□□□ 1.59
CRAT-202ENST00000393384 HLFQ16534 295 aa24.96■■□□□ 1.59
CRAT-202ENST00000393384 SOGA3Q5TF21 947 aa24.96■■□□□ 1.59
CRAT-202ENST00000393384 STYK1Q6J9G0 422 aa24.96■■□□□ 1.59
CRAT-202ENST00000393384 NBPF5PQ86XG9 351 aaPredicted RBP24.96■■□□□ 1.59
CRAT-202ENST00000393384 NIP7Q9Y221 180 aaKnown RBP eCLIP24.96■■□□□ 1.59
CRAT-202ENST00000393384 ERVV-1B6SEH8 477 aa24.95■■□□□ 1.58
CRAT-202ENST00000393384 HSPA1AP0DMV8 641 aaKnown RBP24.95■■□□□ 1.58
CRAT-202ENST00000393384 HSPA1BP0DMV9 641 aaKnown RBP24.95■■□□□ 1.58
CRAT-202ENST00000393384 NGEFQ8N5V2 710 aa24.95■■□□□ 1.58
CRAT-202ENST00000393384 TRIM35Q9UPQ4 493 aa24.95■■□□□ 1.58
CRAT-202ENST00000393384 SLX4Q8IY92 1834 aa24.94■■□□□ 1.58
CRAT-202ENST00000393384 SRGNP10124 158 aa24.94■■□□□ 1.58
CRAT-202ENST00000393384 MYL6BP14649 208 aa24.94■■□□□ 1.58
CRAT-202ENST00000393384 TPTE2Q6XPS3 522 aa24.94■■□□□ 1.58
CRAT-202ENST00000393384 MASTLQ96GX5 879 aa24.94■■□□□ 1.58
CRAT-202ENST00000393384 MAP3K15Q6ZN16 1313 aa24.93■■□□□ 1.58
CRAT-202ENST00000393384 PRPF40BQ6NWY9 871 aaKnown RBP24.93■■□□□ 1.58
CRAT-202ENST00000393384 KIF6Q6ZMV9 814 aa24.92■■□□□ 1.58
CRAT-202ENST00000393384 CHL1O00533 1208 aa24.91■■□□□ 1.58
CRAT-202ENST00000393384 CHADLQ6NUI6 762 aa24.91■■□□□ 1.58
CRAT-202ENST00000393384 TTLL7Q6ZT98 887 aa24.91■■□□□ 1.58
CRAT-202ENST00000393384 EIF2S2P20042 333 aaKnown RBP24.9■■□□□ 1.58
CRAT-202ENST00000393384 CREBZFQ9NS37 354 aa24.9■■□□□ 1.58
CRAT-202ENST00000393384 CAPN15O75808 1086 aa24.89■■□□□ 1.58
CRAT-202ENST00000393384 DDNO94850 711 aaPredicted RBP24.89■■□□□ 1.58
CRAT-202ENST00000393384 KLRG2A4D1S0 409 aaPredicted RBP24.88■■□□□ 1.57
CRAT-202ENST00000393384 PDIA6Q15084 440 aa24.88■■□□□ 1.57
CRAT-202ENST00000393384 IQCA1LA6NCM1 817 aa24.87■■□□□ 1.57
CRAT-202ENST00000393384 FAM177BA6PVY3 158 aa24.87■■□□□ 1.57
CRAT-202ENST00000393384 LRP10Q7Z4F1 713 aa24.87■■□□□ 1.57
CRAT-202ENST00000393384 NYXQ9GZU5 481 aa24.87■■□□□ 1.57
CRAT-202ENST00000393384 ZBTB3Q9H5J0 574 aa24.87■■□□□ 1.57
CRAT-202ENST00000393384 LAS1LQ9Y4W2 734 aaKnown RBP24.87■■□□□ 1.57
CRAT-202ENST00000393384 ANKRD36CQ5JPF3 1778 aa24.87■■□□□ 1.57
CRAT-202ENST00000393384 GTF2E1P29083 439 aaPredicted RBP24.86■■□□□ 1.57
CRAT-202ENST00000393384 CCDC93Q567U6 631 aa24.86■■□□□ 1.57
CRAT-202ENST00000393384 NPR1P16066 1061 aa24.85■■□□□ 1.57
CRAT-202ENST00000393384 GIGYF2Q6Y7W6 1299 aaKnown RBP24.85■■□□□ 1.57
CRAT-202ENST00000393384 ZNF34Q8IZ26 560 aa24.84■■□□□ 1.57
CRAT-202ENST00000393384 C7orf43Q8WVR3 580 aa24.84■■□□□ 1.57
CRAT-202ENST00000393384 L3MBTL3Q96JM7 780 aaPredicted RBP24.84■■□□□ 1.57
CRAT-202ENST00000393384 CFAP44Q96MT7 982 aa24.84■■□□□ 1.57
CRAT-202ENST00000393384 SCN4AP35499 1836 aa24.84■■□□□ 1.57
CRAT-202ENST00000393384 IBTKQ9P2D0 1353 aaPredicted RBP24.83■■□□□ 1.57
CRAT-202ENST00000393384 ZNF316A6NFI3 1004 aaPredicted RBP24.83■■□□□ 1.57
CRAT-202ENST00000393384 APAF1O14727 1248 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms