RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 CLASRPQ8N2M8 674 aaKnown RBP17.46■□□□□ 0.39
MKS1-203ENST00000393120 CARD10Q9BWT7 1032 aa17.46■□□□□ 0.39
MKS1-203ENST00000393120 ERBB4Q15303 1308 aa17.46■□□□□ 0.39
MKS1-203ENST00000393120 NEURL1BA8MQ27 555 aa17.45■□□□□ 0.38
MKS1-203ENST00000393120 MCCP23508 829 aa17.45■□□□□ 0.38
MKS1-203ENST00000393120 GCKRQ14397 625 aa17.45■□□□□ 0.38
MKS1-203ENST00000393120 ANKRD13DQ6ZTN6 518 aa17.45■□□□□ 0.38
MKS1-203ENST00000393120 TOM1L2Q6ZVM7 507 aa17.45■□□□□ 0.38
MKS1-203ENST00000393120 SUCLG2Q96I99 432 aa17.45■□□□□ 0.38
MKS1-203ENST00000393120 DDX11L8A8MPP1 907 aa17.45■□□□□ 0.38
MKS1-203ENST00000393120 MYL6BP14649 208 aa17.45■□□□□ 0.38
MKS1-203ENST00000393120 COL15A1P39059 1388 aa17.44■□□□□ 0.38
MKS1-203ENST00000393120 GLRX3O76003 335 aaKnown RBP17.44■□□□□ 0.38
MKS1-203ENST00000393120 OS9Q13438 667 aaPredicted RBP17.44■□□□□ 0.38
MKS1-203ENST00000393120 CLEC17AQ6ZS10 378 aa17.43■□□□□ 0.38
MKS1-203ENST00000393120 CNTROBQ8N137 903 aa17.43■□□□□ 0.38
MKS1-203ENST00000393120 TNPO1Q92973 898 aaKnown RBP17.43■□□□□ 0.38
MKS1-203ENST00000393120 BICC1Q9H694 974 aaKnown RBP17.43■□□□□ 0.38
MKS1-203ENST00000393120 IL2RBP14784 551 aa17.43■□□□□ 0.38
MKS1-203ENST00000393120 CWC22Q9HCG8 908 aaKnown RBP17.43■□□□□ 0.38
MKS1-203ENST00000393120 MCM2P49736 904 aa17.42■□□□□ 0.38
MKS1-203ENST00000393120 GBP4Q96PP9 640 aa17.42■□□□□ 0.38
MKS1-203ENST00000393120 ECHDC1Q9NTX5 307 aa17.42■□□□□ 0.38
MKS1-203ENST00000393120 GPATCH3Q96I76 525 aa17.41■□□□□ 0.38
MKS1-203ENST00000393120 ANO2Q9NQ90 1003 aa17.41■□□□□ 0.38
MKS1-203ENST00000393120 GLI3P10071 1580 aa17.41■□□□□ 0.38
MKS1-203ENST00000393120 PTMSP20962 102 aa17.41■□□□□ 0.38
MKS1-203ENST00000393120 G3BP1Q13283 466 aaKnown RBP eCLIP17.41■□□□□ 0.38
MKS1-203ENST00000393120 PLBD2Q8NHP8 589 aa17.41■□□□□ 0.38
MKS1-203ENST00000393120 MYD88Q99836 296 aa17.41■□□□□ 0.38
MKS1-203ENST00000393120 SGSM2O43147 1006 aa17.4■□□□□ 0.38
MKS1-203ENST00000393120 PA2G4Q9UQ80 394 aaKnown RBP17.4■□□□□ 0.38
MKS1-203ENST00000393120 IFIT2P09913 472 aaKnown RBP17.39■□□□□ 0.37
MKS1-203ENST00000393120 ABCA3Q99758 1704 aa17.39■□□□□ 0.37
MKS1-203ENST00000393120 SASH1O94885 1247 aa17.39■□□□□ 0.37
MKS1-203ENST00000393120 HSPA4P34932 840 aa17.39■□□□□ 0.37
MKS1-203ENST00000393120 NUCB2P80303 420 aa17.39■□□□□ 0.37
MKS1-203ENST00000393120 TRAK2O60296 914 aa17.38■□□□□ 0.37
MKS1-203ENST00000393120 RABL6Q3YEC7 729 aaPredicted RBP17.38■□□□□ 0.37
MKS1-203ENST00000393120 COPRSQ9NQ92 184 aa17.38■□□□□ 0.37
MKS1-203ENST00000393120 FOXD4L1Q9NU39 408 aa17.38■□□□□ 0.37
MKS1-203ENST00000393120 LAMB4A4D0S4 1761 aa17.38■□□□□ 0.37
MKS1-203ENST00000393120 NHSL1Q5SYE7 1610 aa17.38■□□□□ 0.37
MKS1-203ENST00000393120 NEK4P51957 841 aa17.37■□□□□ 0.37
MKS1-203ENST00000393120 EVA1CP58658 441 aa17.37■□□□□ 0.37
MKS1-203ENST00000393120 AACSQ86V21 672 aa17.37■□□□□ 0.37
MKS1-203ENST00000393120 PALD1Q9ULE6 856 aa17.37■□□□□ 0.37
MKS1-203ENST00000393120 RAD50Q92878 1312 aa17.36■□□□□ 0.37
MKS1-203ENST00000393120 NBPF26B4DH59 902 aa17.36■□□□□ 0.37
MKS1-203ENST00000393120 CYP2E1P05181 493 aaPredicted RBP17.36■□□□□ 0.37
MKS1-203ENST00000393120 EPHA10Q5JZY3 1008 aa17.36■□□□□ 0.37
MKS1-203ENST00000393120 NBPF14Q5TI25 921 aa17.36■□□□□ 0.37
MKS1-203ENST00000393120 NBPF10Q6P3W6 841 aaKnown RBP17.36■□□□□ 0.37
MKS1-203ENST00000393120 NBPF15Q8N660 670 aa17.36■□□□□ 0.37
MKS1-203ENST00000393120 RUFY2Q8WXA3 655 aa17.36■□□□□ 0.37
MKS1-203ENST00000393120 EVI5LQ96CN4 794 aa17.36■□□□□ 0.37
MKS1-203ENST00000393120 IL25Q9H293 177 aa17.36■□□□□ 0.37
MKS1-203ENST00000393120 TNS2Q63HR2 1409 aa17.36■□□□□ 0.37
MKS1-203ENST00000393120 UBR2Q8IWV8 1755 aa17.36■□□□□ 0.37
MKS1-203ENST00000393120 KCPQ6ZWJ8 1503 aa17.35■□□□□ 0.37
MKS1-203ENST00000393120 MAP4K4O95819 1239 aaPredicted RBP17.35■□□□□ 0.37
MKS1-203ENST00000393120 SKOR2Q2VWA4 1001 aaPredicted RBP17.35■□□□□ 0.37
MKS1-203ENST00000393120 EAF2Q96CJ1 260 aaPredicted RBP17.35■□□□□ 0.37
MKS1-203ENST00000393120 LSG1Q9H089 658 aaKnown RBP17.35■□□□□ 0.37
MKS1-203ENST00000393120 PAPPAQ13219 1627 aa17.35■□□□□ 0.37
MKS1-203ENST00000393120 RFX5P48382 616 aaPredicted RBP17.35■□□□□ 0.37
MKS1-203ENST00000393120 CASP7P55210 303 aa17.35■□□□□ 0.37
MKS1-203ENST00000393120 CUL4AQ13619 759 aa17.34■□□□□ 0.37
MKS1-203ENST00000393120 SSFA2P28290 1259 aa17.33■□□□□ 0.37
MKS1-203ENST00000393120 PIP4K2AP48426 406 aaPredicted RBP17.33■□□□□ 0.37
MKS1-203ENST00000393120 KIAA1211Q6ZU35 1233 aa17.33■□□□□ 0.37
MKS1-203ENST00000393120 STRN4Q9NRL3 753 aa17.33■□□□□ 0.37
MKS1-203ENST00000393120 A0A087WZG4 1122 aa17.33■□□□□ 0.36
MKS1-203ENST00000393120 H7C1W4 665 aa17.33■□□□□ 0.36
MKS1-203ENST00000393120 HIP1O00291 1037 aa17.33■□□□□ 0.36
MKS1-203ENST00000393120 DDX54Q8TDD1 881 aaKnown RBP17.33■□□□□ 0.36
MKS1-203ENST00000393120 INTS4Q96HW7 963 aaKnown RBP17.33■□□□□ 0.36
MKS1-203ENST00000393120 TMX3Q96JJ7 454 aa17.33■□□□□ 0.36
MKS1-203ENST00000393120 DIAPH3Q9NSV4 1193 aa17.33■□□□□ 0.36
MKS1-203ENST00000393120 UBE3BQ7Z3V4 1068 aa17.32■□□□□ 0.36
MKS1-203ENST00000393120 SNRKQ9NRH2 765 aa17.32■□□□□ 0.36
MKS1-203ENST00000393120 ARFGEF2Q9Y6D5 1785 aa17.32■□□□□ 0.36
MKS1-203ENST00000393120 SHANK3Q9BYB0 1731 aa17.32■□□□□ 0.36
MKS1-203ENST00000393120 PTPN12Q05209 780 aaKnown RBP17.31■□□□□ 0.36
MKS1-203ENST00000393120 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.31■□□□□ 0.36
MKS1-203ENST00000393120 AK9Q5TCS8 1911 aa17.31■□□□□ 0.36
MKS1-203ENST00000393120 GOLGA6L22H0YM25 854 aa17.31■□□□□ 0.36
MKS1-203ENST00000393120 L1TD1Q5T7N2 865 aaKnown RBP17.31■□□□□ 0.36
MKS1-203ENST00000393120 CWC27Q6UX04 472 aaKnown RBP17.31■□□□□ 0.36
MKS1-203ENST00000393120 KCNB2Q92953 911 aa17.31■□□□□ 0.36
MKS1-203ENST00000393120 ATP5J2-PTCD1G3V325 749 aa17.3■□□□□ 0.36
MKS1-203ENST00000393120 PTCD1O75127 700 aaKnown RBP17.3■□□□□ 0.36
MKS1-203ENST00000393120 BAG4O95429 457 aaKnown RBP17.3■□□□□ 0.36
MKS1-203ENST00000393120 VSIG10Q8N0Z9 540 aa17.3■□□□□ 0.36
MKS1-203ENST00000393120 ZGPATQ8N5A5 531 aaKnown RBP17.3■□□□□ 0.36
MKS1-203ENST00000393120 FSD2A1L4K1 749 aa17.29■□□□□ 0.36
MKS1-203ENST00000393120 CCDC191Q8NCU4 936 aa17.29■□□□□ 0.36
MKS1-203ENST00000393120 TEX13AQ9BXU3 409 aaPredicted RBP17.29■□□□□ 0.36
MKS1-203ENST00000393120 CCDC8Q9H0W5 538 aaPredicted RBP17.29■□□□□ 0.36
MKS1-203ENST00000393120 SIL1Q9H173 461 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms