RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 GOLGA6L9A6NEM1 432 aa15.19■□□□□ 0.02
LCA5-202ENST00000392959 USO1O60763 962 aaKnown RBP15.19■□□□□ 0.02
LCA5-202ENST00000392959 RBM5P52756 815 aaKnown RBP eCLIP15.19■□□□□ 0.02
LCA5-202ENST00000392959 SSRP1Q08945 709 aaKnown RBP15.19■□□□□ 0.02
LCA5-202ENST00000392959 MKNK2Q9HBH9 465 aa15.19■□□□□ 0.02
LCA5-202ENST00000392959 TTC21BQ7Z4L5 1316 aa15.19■□□□□ 0.02
LCA5-202ENST00000392959 RANBP6O60518 1105 aaKnown RBP15.19■□□□□ 0.02
LCA5-202ENST00000392959 RHPN1Q8TCX5 695 aa15.19■□□□□ 0.02
LCA5-202ENST00000392959 SNX21Q969T3 373 aa15.19■□□□□ 0.02
LCA5-202ENST00000392959 SEC63Q9UGP8 760 aaKnown RBP15.19■□□□□ 0.02
LCA5-202ENST00000392959 IQGAP2Q13576 1575 aa15.19■□□□□ 0.02
LCA5-202ENST00000392959 IARSP41252 1262 aaKnown RBP15.19■□□□□ 0.02
LCA5-202ENST00000392959 CAVIN4Q5BKX8 364 aa15.19■□□□□ 0.02
LCA5-202ENST00000392959 LUZP1Q86V48 1076 aa15.19■□□□□ 0.02
LCA5-202ENST00000392959 GOLIM4O00461 696 aa15.18■□□□□ 0.02
LCA5-202ENST00000392959 MEIS3Q99687 375 aa15.18■□□□□ 0.02
LCA5-202ENST00000392959 ZSCAN16Q9H4T2 348 aaPredicted RBP15.18■□□□□ 0.02
LCA5-202ENST00000392959 C14orf93Q9H972 538 aaKnown RBP15.18■□□□□ 0.02
LCA5-202ENST00000392959 PAXBP1Q9Y5B6 917 aa15.18■□□□□ 0.02
LCA5-202ENST00000392959 PDE1AP54750 535 aa15.18■□□□□ 0.02
LCA5-202ENST00000392959 BICDL1Q6ZP65 573 aa15.18■□□□□ 0.02
LCA5-202ENST00000392959 VPS36Q86VN1 386 aa15.18■□□□□ 0.02
LCA5-202ENST00000392959 POLR3DP05423 398 aaPredicted RBP15.18■□□□□ 0.02
LCA5-202ENST00000392959 EZRP15311 586 aaKnown RBP15.18■□□□□ 0.02
LCA5-202ENST00000392959 ANAPC15P60006 121 aa15.18■□□□□ 0.02
LCA5-202ENST00000392959 PAF1Q8N7H5 531 aa15.18■□□□□ 0.02
LCA5-202ENST00000392959 TSG101Q99816 390 aa15.18■□□□□ 0.02
LCA5-202ENST00000392959 MAP3K2Q9Y2U5 619 aa15.18■□□□□ 0.02
LCA5-202ENST00000392959 PLB1Q6P1J6 1458 aa15.18■□□□□ 0.02
LCA5-202ENST00000392959 FGFR1OPO95684 399 aaKnown RBP15.17■□□□□ 0.02
LCA5-202ENST00000392959 PRKCSHP14314 528 aaPredicted RBP15.17■□□□□ 0.02
LCA5-202ENST00000392959 CCDC102BQ68D86 513 aa15.17■□□□□ 0.02
LCA5-202ENST00000392959 ANKRD44Q8N8A2 993 aa15.17■□□□□ 0.02
LCA5-202ENST00000392959 RAB34Q9BZG1 259 aa15.17■□□□□ 0.02
LCA5-202ENST00000392959 PIK3R4Q99570 1358 aa15.17■□□□□ 0.02
LCA5-202ENST00000392959 CCDC194A0A1B0GVG4 234 aa15.17■□□□□ 0.02
LCA5-202ENST00000392959 BMS1Q14692 1282 aaKnown RBP15.17■□□□□ 0.02
LCA5-202ENST00000392959 CEP135Q66GS9 1140 aa15.17■□□□□ 0.02
LCA5-202ENST00000392959 POTEB2H3BUK9 544 aa15.17■□□□□ 0.02
LCA5-202ENST00000392959 DHX37Q8IY37 1157 aaKnown RBP15.17■□□□□ 0.02
LCA5-202ENST00000392959 ANKRD36BQ8N2N9 1353 aa15.16■□□□□ 0.02
LCA5-202ENST00000392959 MAPK8IP2Q13387 824 aaPredicted RBP15.16■□□□□ 0.02
LCA5-202ENST00000392959 NOLC1Q14978 699 aaKnown RBP eCLIP15.16■□□□□ 0.02
LCA5-202ENST00000392959 CCDC150Q8NCX0 1101 aa15.16■□□□□ 0.02
LCA5-202ENST00000392959 CETN2P41208 172 aa15.16■□□□□ 0.02
LCA5-202ENST00000392959 TDRD12Q587J7 1177 aaKnown RBP15.16■□□□□ 0.02
LCA5-202ENST00000392959 NECAB1Q8N987 351 aa15.16■□□□□ 0.02
LCA5-202ENST00000392959 FAM200AQ8TCP9 573 aa15.16■□□□□ 0.02
LCA5-202ENST00000392959 BRF1Q92994 677 aa15.16■□□□□ 0.02
LCA5-202ENST00000392959 TMOD3Q9NYL9 352 aa15.16■□□□□ 0.02
LCA5-202ENST00000392959 GTF2F1P35269 517 aaKnown RBP eCLIP15.16■□□□□ 0.02
LCA5-202ENST00000392959 SMARCC1Q92922 1105 aaPredicted RBP15.16■□□□□ 0.02
LCA5-202ENST00000392959 PHF8Q9UPP1 1060 aa15.16■□□□□ 0.02
LCA5-202ENST00000392959 NLRP5P59047 1200 aa15.15■□□□□ 0.02
LCA5-202ENST00000392959 GNG11P61952 73 aa15.15■□□□□ 0.02
LCA5-202ENST00000392959 ESYT1Q9BSJ8 1104 aa15.15■□□□□ 0.02
LCA5-202ENST00000392959 TMX1Q9H3N1 280 aa15.15■□□□□ 0.02
LCA5-202ENST00000392959 SNRKQ9NRH2 765 aa15.15■□□□□ 0.02
LCA5-202ENST00000392959 NOS1P29475 1434 aa15.15■□□□□ 0.02
LCA5-202ENST00000392959 MICU3Q86XE3 530 aa15.15■□□□□ 0.02
LCA5-202ENST00000392959 DYDC1Q8WWB3 177 aa15.15■□□□□ 0.02
LCA5-202ENST00000392959 ZKSCAN5Q9Y2L8 839 aa15.15■□□□□ 0.02
LCA5-202ENST00000392959 SPDYE4A6NLX3 237 aa15.15■□□□□ 0.02
LCA5-202ENST00000392959 PPFIA3O75145 1194 aa15.15■□□□□ 0.02
LCA5-202ENST00000392959 SLC5A1P13866 664 aa15.15■□□□□ 0.02
LCA5-202ENST00000392959 SSR1P43307 286 aaKnown RBP15.15■□□□□ 0.02
LCA5-202ENST00000392959 DNA2P51530 1060 aa15.15■□□□□ 0.02
LCA5-202ENST00000392959 HAND2P61296 217 aa15.15■□□□□ 0.02
LCA5-202ENST00000392959 UBE3BQ7Z3V4 1068 aa15.15■□□□□ 0.02
LCA5-202ENST00000392959 ZNF830Q96NB3 372 aaPredicted RBP15.15■□□□□ 0.02
LCA5-202ENST00000392959 TRMT112Q9UI30 125 aaKnown RBP15.15■□□□□ 0.02
LCA5-202ENST00000392959 ISM2Q6H9L7 571 aa15.15■□□□□ 0.02
LCA5-202ENST00000392959 CCDC186Q7Z3E2 898 aa15.15■□□□□ 0.02
LCA5-202ENST00000392959 USP48Q86UV5 1035 aa15.15■□□□□ 0.02
LCA5-202ENST00000392959 CNPY2Q9Y2B0 182 aa15.15■□□□□ 0.02
LCA5-202ENST00000392959 ZNF652Q9Y2D9 606 aa15.15■□□□□ 0.02
LCA5-202ENST00000392959 ANKRD18BA2A2Z9 1011 aa15.14■□□□□ 0.01
LCA5-202ENST00000392959 GBP2P32456 591 aaPredicted RBP15.14■□□□□ 0.01
LCA5-202ENST00000392959 CATIPQ7Z7H3 387 aa15.14■□□□□ 0.01
LCA5-202ENST00000392959 CCDC171Q6TFL3 1326 aa15.14■□□□□ 0.01
LCA5-202ENST00000392959 RALGAPBQ86X10 1494 aa15.14■□□□□ 0.01
LCA5-202ENST00000392959 MTIF2P46199 727 aaKnown RBP15.14■□□□□ 0.01
LCA5-202ENST00000392959 FAM135AQ9P2D6 1515 aa15.14■□□□□ 0.01
LCA5-202ENST00000392959 KIF20AO95235 890 aa15.14■□□□□ 0.01
LCA5-202ENST00000392959 TMEM67Q5HYA8 995 aa15.14■□□□□ 0.01
LCA5-202ENST00000392959 KANK3Q6NY19 840 aa15.14■□□□□ 0.01
LCA5-202ENST00000392959 TRERF1Q96PN7 1200 aa15.14■□□□□ 0.01
LCA5-202ENST00000392959 CCDC113Q9H0I3 377 aa15.14■□□□□ 0.01
LCA5-202ENST00000392959 TMEM266Q2M3C6 531 aa15.14■□□□□ 0.01
LCA5-202ENST00000392959 ZNF444Q8N0Y2 327 aaPredicted RBP15.14■□□□□ 0.01
LCA5-202ENST00000392959 NCOA7Q8NI08 942 aa15.14■□□□□ 0.01
LCA5-202ENST00000392959 ZBTB3Q9H5J0 574 aa15.13■□□□□ 0.01
LCA5-202ENST00000392959 FOXO3O43524 673 aa15.13■□□□□ 0.01
LCA5-202ENST00000392959 SKILP12757 684 aa15.13■□□□□ 0.01
LCA5-202ENST00000392959 METAP2P50579 478 aaKnown RBP eCLIP15.13■□□□□ 0.01
LCA5-202ENST00000392959 IFFO1Q0D2I5 559 aa15.13■□□□□ 0.01
LCA5-202ENST00000392959 TCEANC2Q96MN5 208 aa15.13■□□□□ 0.01
LCA5-202ENST00000392959 INCENPQ9NQS7 918 aa15.13■□□□□ 0.01
LCA5-202ENST00000392959 LDHAL6AQ6ZMR3 332 aa15.13■□□□□ 0.01
LCA5-202ENST00000392959 DZIP1Q86YF9 867 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms