RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 SLC9A9Q8IVB4 645 aa4.55□□□□□ -1.68
SNORA40.19-201ENST00000390846 DEPDC4Q8N2C3 294 aa4.55□□□□□ -1.68
SNORA40.19-201ENST00000390846 TNFRSF25Q93038 417 aa4.55□□□□□ -1.68
SNORA40.19-201ENST00000390846 SIRT1Q96EB6 747 aa4.55□□□□□ -1.68
SNORA40.19-201ENST00000390846 PRDM6Q9NQX0 595 aa4.55□□□□□ -1.68
SNORA40.19-201ENST00000390846 MARK1Q9P0L2 795 aa4.55□□□□□ -1.68
SNORA40.19-201ENST00000390846 ELOA3CA0A087WX78 387 aaPredicted RBP4.54□□□□□ -1.68
SNORA40.19-201ENST00000390846 ELOA3DA6NLF2 546 aaPredicted RBP4.54□□□□□ -1.68
SNORA40.19-201ENST00000390846 APBB1O00213 710 aa4.54□□□□□ -1.68
SNORA40.19-201ENST00000390846 SIN3BO75182 1162 aa4.54□□□□□ -1.68
SNORA40.19-201ENST00000390846 ALBP02768 609 aa4.54□□□□□ -1.68
SNORA40.19-201ENST00000390846 SOX11P35716 441 aa4.54□□□□□ -1.68
SNORA40.19-201ENST00000390846 KCNQ4P56696 695 aa4.54□□□□□ -1.68
SNORA40.19-201ENST00000390846 ELOA3BQ3SY89 546 aa4.54□□□□□ -1.68
SNORA40.19-201ENST00000390846 LRRC69Q6ZNQ3 347 aa4.54□□□□□ -1.68
SNORA40.19-201ENST00000390846 MICALL1Q8N3F8 863 aa4.54□□□□□ -1.68
SNORA40.19-201ENST00000390846 ELOA3Q8NG57 546 aa4.54□□□□□ -1.68
SNORA40.19-201ENST00000390846 KRTAP4-12Q9BQ66 201 aa4.54□□□□□ -1.68
SNORA40.19-201ENST00000390846 ESF1Q9H501 851 aaKnown RBP4.54□□□□□ -1.68
SNORA40.19-201ENST00000390846 CABP1Q9NZU7 370 aa4.54□□□□□ -1.68
SNORA40.19-201ENST00000390846 DMGDHQ9UI17 866 aaKnown RBP4.54□□□□□ -1.68
SNORA40.19-201ENST00000390846 BCS1LQ9Y276 419 aa4.54□□□□□ -1.68
SNORA40.19-201ENST00000390846 USP17L5A8MUK1 530 aa4.53□□□□□ -1.68
SNORA40.19-201ENST00000390846 SKIP12755 728 aa4.53□□□□□ -1.68
SNORA40.19-201ENST00000390846 SEMA3FQ13275 785 aa4.53□□□□□ -1.68
SNORA40.19-201ENST00000390846 ARSJQ5FYB0 599 aaPredicted RBP4.53□□□□□ -1.68
SNORA40.19-201ENST00000390846 PLEKHM2Q8IWE5 1019 aa4.53□□□□□ -1.68
SNORA40.19-201ENST00000390846 FNBP4Q8N3X1 1017 aaPredicted RBP4.53□□□□□ -1.68
SNORA40.19-201ENST00000390846 TSPAN10Q9H1Z9 355 aaPredicted RBP4.53□□□□□ -1.68
SNORA40.19-201ENST00000390846 TPSG1Q9NRR2 321 aa4.53□□□□□ -1.68
SNORA40.19-201ENST00000390846 FAM229AH3BQW9 127 aa4.52□□□□□ -1.69
SNORA40.19-201ENST00000390846 AMPD1P23109 780 aa4.52□□□□□ -1.69
SNORA40.19-201ENST00000390846 TYRO3Q06418 890 aa4.52□□□□□ -1.69
SNORA40.19-201ENST00000390846 RAB44Q7Z6P3 723 aaPredicted RBP4.52□□□□□ -1.69
SNORA40.19-201ENST00000390846 HSH2DQ96JZ2 352 aa4.52□□□□□ -1.69
SNORA40.19-201ENST00000390846 LZTS3O60299 673 aaPredicted RBP4.51□□□□□ -1.69
SNORA40.19-201ENST00000390846 SELPP16109 830 aa4.51□□□□□ -1.69
SNORA40.19-201ENST00000390846 EML3Q32P44 896 aa4.51□□□□□ -1.69
SNORA40.19-201ENST00000390846 NBPF1Q3BBV0 1214 aa4.51□□□□□ -1.69
SNORA40.19-201ENST00000390846 GAS2L2Q8NHY3 880 aa4.51□□□□□ -1.69
SNORA40.19-201ENST00000390846 PSMG3-AS1Q96PY0 264 aa4.51□□□□□ -1.69
SNORA40.19-201ENST00000390846 SSBP4Q9BWG4 385 aaPredicted RBP4.51□□□□□ -1.69
SNORA40.19-201ENST00000390846 SEMA6BQ9H3T3 888 aa4.51□□□□□ -1.69
SNORA40.19-201ENST00000390846 NOD1Q9Y239 953 aa4.51□□□□□ -1.69
SNORA40.19-201ENST00000390846 M0R082 166 aa4.5□□□□□ -1.69
SNORA40.19-201ENST00000390846 M0R2N6 131 aa4.5□□□□□ -1.69
SNORA40.19-201ENST00000390846 SPATA31C1P0DKV0 1188 aa4.5□□□□□ -1.69
SNORA40.19-201ENST00000390846 GTF2E1P29083 439 aaPredicted RBP4.5□□□□□ -1.69
SNORA40.19-201ENST00000390846 PLAURQ03405 335 aa4.5□□□□□ -1.69
SNORA40.19-201ENST00000390846 GRIK5Q16478 980 aa4.5□□□□□ -1.69
SNORA40.19-201ENST00000390846 C1orf53Q5VUE5 145 aa4.5□□□□□ -1.69
SNORA40.19-201ENST00000390846 SIX5Q8N196 739 aa4.5□□□□□ -1.69
SNORA40.19-201ENST00000390846 ZNF417Q8TAU3 575 aa4.5□□□□□ -1.69
SNORA40.19-201ENST00000390846 SUSD3Q96L08 255 aa4.5□□□□□ -1.69
SNORA40.19-201ENST00000390846 ZNF587Q96SQ5 575 aaPredicted RBP4.5□□□□□ -1.69
SNORA40.19-201ENST00000390846 NAGPAQ9UK23 515 aa4.5□□□□□ -1.69
SNORA40.19-201ENST00000390846 HCN4Q9Y3Q4 1203 aa4.5□□□□□ -1.69
SNORA40.19-201ENST00000390846 GPC6Q9Y625 555 aaPredicted RBP4.5□□□□□ -1.69
SNORA40.19-201ENST00000390846 USP17L3A6NCW0 530 aa4.49□□□□□ -1.69
SNORA40.19-201ENST00000390846 USP17L4A6NCW7 530 aa4.49□□□□□ -1.69
SNORA40.19-201ENST00000390846 SFI1A8K8P3 1242 aa4.49□□□□□ -1.69
SNORA40.19-201ENST00000390846 BACH1O14867 736 aa4.49□□□□□ -1.69
SNORA40.19-201ENST00000390846 DYRK3O43781 588 aa4.49□□□□□ -1.69
SNORA40.19-201ENST00000390846 TATP17735 454 aaPredicted RBP4.49□□□□□ -1.69
SNORA40.19-201ENST00000390846 SPEM2Q0P670 501 aa4.49□□□□□ -1.69
SNORA40.19-201ENST00000390846 GRIK4Q16099 956 aa4.49□□□□□ -1.69
SNORA40.19-201ENST00000390846 CCDC102BQ68D86 513 aa4.49□□□□□ -1.69
SNORA40.19-201ENST00000390846 USP17L2Q6R6M4 530 aa4.49□□□□□ -1.69
SNORA40.19-201ENST00000390846 USP17L1Q7RTZ2 530 aa4.49□□□□□ -1.69
SNORA40.19-201ENST00000390846 TSEN2Q8NCE0 465 aaKnown RBP4.49□□□□□ -1.69
SNORA40.19-201ENST00000390846 C2orf49Q9BVC5 232 aaPredicted RBP4.49□□□□□ -1.69
SNORA40.19-201ENST00000390846 PHACTR1Q9C0D0 580 aa4.49□□□□□ -1.69
SNORA40.19-201ENST00000390846 SERTM1A2A2V5 107 aa4.48□□□□□ -1.69
SNORA40.19-201ENST00000390846 ZBTB42B2RXF5 422 aa4.48□□□□□ -1.69
SNORA40.19-201ENST00000390846 GATA4P43694 442 aa4.48□□□□□ -1.69
SNORA40.19-201ENST00000390846 HDGFL1Q5TGJ6 251 aa4.48□□□□□ -1.69
SNORA40.19-201ENST00000390846 STAG2Q8N3U4 1231 aa4.48□□□□□ -1.69
SNORA40.19-201ENST00000390846 TPCN2Q8NHX9 752 aa4.48□□□□□ -1.69
SNORA40.19-201ENST00000390846 GSX2Q9BZM3 304 aa4.48□□□□□ -1.69
SNORA40.19-201ENST00000390846 NOP53Q9NZM5 478 aaKnown RBP4.48□□□□□ -1.69
SNORA40.19-201ENST00000390846 ATP9BO43861 1147 aa4.47□□□□□ -1.69
SNORA40.19-201ENST00000390846 ADH7P40394 386 aa4.47□□□□□ -1.69
SNORA40.19-201ENST00000390846 ADGRE1Q14246 886 aa4.47□□□□□ -1.69
SNORA40.19-201ENST00000390846 KANK4Q5T7N3 995 aaPredicted RBP4.47□□□□□ -1.69
SNORA40.19-201ENST00000390846 BICDL1Q6ZP65 573 aa4.47□□□□□ -1.69
SNORA40.19-201ENST00000390846 KRTAP19-1Q8IUB9 90 aa4.47□□□□□ -1.69
SNORA40.19-201ENST00000390846 OGFOD1Q8N543 542 aa4.47□□□□□ -1.69
SNORA40.19-201ENST00000390846 BRD7Q9NPI1 651 aa4.47□□□□□ -1.69
SNORA40.19-201ENST00000390846 PRR12Q9ULL5 1215 aa4.47□□□□□ -1.69
SNORA40.19-201ENST00000390846 AFF1P51825 1210 aaKnown RBP4.46□□□□□ -1.7
SNORA40.19-201ENST00000390846 PSMA6P60900 246 aaKnown RBP4.46□□□□□ -1.7
SNORA40.19-201ENST00000390846 SHISA2Q6UWI4 295 aa4.46□□□□□ -1.7
SNORA40.19-201ENST00000390846 KRTAP1-3Q8IUG1 177 aa4.46□□□□□ -1.7
SNORA40.19-201ENST00000390846 ALDH16A1Q8IZ83 802 aa4.46□□□□□ -1.7
SNORA40.19-201ENST00000390846 LARGE2Q8N3Y3 721 aa4.46□□□□□ -1.7
SNORA40.19-201ENST00000390846 ARXQ96QS3 562 aa4.46□□□□□ -1.7
SNORA40.19-201ENST00000390846 PRM3Q9NNZ6 103 aa4.46□□□□□ -1.7
SNORA40.19-201ENST00000390846 ZFATQ9P243 1243 aa4.46□□□□□ -1.7
SNORA40.19-201ENST00000390846 MKRN1Q9UHC7 482 aaKnown RBP4.46□□□□□ -1.7
SNORA40.19-201ENST00000390846 ATAD2Q6PL18 1390 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms