RNA–Protein interactions for RNA: ENST00000390520.1

TRAJ17-201, Transcript of T cell receptor alpha joining 17, humanhuman

APPRIS P1 BASIC

Gene TRAJ17, Length 63 nt, Biotype TR J gene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ17-201ENST00000390520 HDGFL2Q7Z4V5 671 aaPredicted RBP4.14□□□□□ -1.75
TRAJ17-201ENST00000390520 VPS37DQ86XT2 251 aa4.14□□□□□ -1.75
TRAJ17-201ENST00000390520 CKAP2LQ8IYA6 745 aa4.14□□□□□ -1.75
TRAJ17-201ENST00000390520 NDUFAF2Q8N183 169 aa4.14□□□□□ -1.75
TRAJ17-201ENST00000390520 PGBD3Q8N328 593 aa4.14□□□□□ -1.75
TRAJ17-201ENST00000390520 E2F7Q96AV8 911 aa4.14□□□□□ -1.75
TRAJ17-201ENST00000390520 ZNF594Q96JF6 807 aaPredicted RBP4.14□□□□□ -1.75
TRAJ17-201ENST00000390520 TUT1Q9H6E5 874 aaKnown RBP4.14□□□□□ -1.75
TRAJ17-201ENST00000390520 PPCSQ9HAB8 311 aa4.14□□□□□ -1.75
TRAJ17-201ENST00000390520 CNTN3Q9P232 1028 aa4.14□□□□□ -1.75
TRAJ17-201ENST00000390520 DDX41Q9UJV9 622 aaKnown RBP4.14□□□□□ -1.75
TRAJ17-201ENST00000390520 FBXO2Q9UK22 296 aaPredicted RBP4.14□□□□□ -1.75
TRAJ17-201ENST00000390520 ZNF652Q9Y2D9 606 aa4.14□□□□□ -1.75
TRAJ17-201ENST00000390520 CHL1O00533 1208 aa4.13□□□□□ -1.75
TRAJ17-201ENST00000390520 SPTLC1O15269 473 aa4.13□□□□□ -1.75
TRAJ17-201ENST00000390520 C21orf2O43822 256 aa4.13□□□□□ -1.75
TRAJ17-201ENST00000390520 LILRB3O75022 631 aa4.13□□□□□ -1.75
TRAJ17-201ENST00000390520 HNRNPCP07910 306 aaKnown RBP eCLIP4.13□□□□□ -1.75
TRAJ17-201ENST00000390520 KCNA2P16389 499 aa4.13□□□□□ -1.75
TRAJ17-201ENST00000390520 PSMA3P25788 255 aa4.13□□□□□ -1.75
TRAJ17-201ENST00000390520 CD151P48509 253 aa4.13□□□□□ -1.75
TRAJ17-201ENST00000390520 PDE3BQ13370 1112 aa4.13□□□□□ -1.75
TRAJ17-201ENST00000390520 SLFNL1Q499Z3 407 aa4.13□□□□□ -1.75
TRAJ17-201ENST00000390520 PRPF38BQ5VTL8 546 aaKnown RBP4.13□□□□□ -1.75
TRAJ17-201ENST00000390520 TTLL5Q6EMB2 1281 aa4.13□□□□□ -1.75
TRAJ17-201ENST00000390520 UBE2Q1Q7Z7E8 422 aa4.13□□□□□ -1.75
TRAJ17-201ENST00000390520 GLYCTKQ8IVS8 523 aa4.13□□□□□ -1.75
TRAJ17-201ENST00000390520 SLF2Q8IX21 1173 aa4.13□□□□□ -1.75
TRAJ17-201ENST00000390520 SMAP1Q8IYB5 467 aaPredicted RBP4.13□□□□□ -1.75
TRAJ17-201ENST00000390520 STK11IPQ8N1F8 1099 aa4.13□□□□□ -1.75
TRAJ17-201ENST00000390520 EFCAB3Q8N7B9 438 aa4.13□□□□□ -1.75
TRAJ17-201ENST00000390520 PAWRQ96IZ0 340 aaKnown RBP4.13□□□□□ -1.75
TRAJ17-201ENST00000390520 FAM161BQ96MY7 647 aa4.13□□□□□ -1.75
TRAJ17-201ENST00000390520 RANBP17Q9H2T7 1088 aaKnown RBP4.13□□□□□ -1.75
TRAJ17-201ENST00000390520 PTPRHQ9HD43 1115 aa4.13□□□□□ -1.75
TRAJ17-201ENST00000390520 NGRNQ9NPE2 291 aaKnown RBP4.13□□□□□ -1.75
TRAJ17-201ENST00000390520 FANCLQ9NW38 375 aa4.13□□□□□ -1.75
TRAJ17-201ENST00000390520 TMEM51Q9NW97 253 aa4.13□□□□□ -1.75
TRAJ17-201ENST00000390520 CDV3Q9UKY7 258 aaKnown RBP4.13□□□□□ -1.75
TRAJ17-201ENST00000390520 MRVI1Q9Y6F6 885 aa4.13□□□□□ -1.75
TRAJ17-201ENST00000390520 GJA3Q9Y6H8 435 aa4.13□□□□□ -1.75
TRAJ17-201ENST00000390520 TRIM64CA6NLI5 447 aa4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 PRSS47A8MTI9 375 aa4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 GOLGA6L6A8MZA4 724 aa4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 USP17L15C9J2P7 530 aa4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 USP17L10C9JJH3 530 aa4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 USP17L13C9JLJ4 530 aa4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 USP17L12C9JPN9 530 aa4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 USP17L11C9JVI0 530 aa4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 USP17L21D6R901 530 aa4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 USP17L18D6R9N7 530 aa4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 USP17L22D6RA61 530 aa4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 USP17L17D6RBQ6 530 aa4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 USP17L19D6RCP7 530 aa4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 USP17L20D6RJB6 530 aa4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 SORBS3O60504 671 aa4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 DIAPH1O60610 1272 aaKnown RBP4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 ALDH1L1O75891 902 aa4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 FOSL1P15407 271 aa4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 NAT1P18440 290 aa4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 ATF4P18848 351 aaPredicted RBP4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 CASQ1P31415 396 aa4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 PIK3CAP42336 1068 aa4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 CDKN1CP49918 316 aaPredicted RBP4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 GEMIN4P57678 1058 aaKnown RBP4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 RACK1P63244 317 aaKnown RBP4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 GPSM2P81274 684 aa4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 DAB2P98082 770 aa4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 FMR1Q06787 632 aaKnown RBP eCLIP4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 USP17L24Q0WX57 530 aa4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 ZNF211Q13398 564 aaPredicted RBP4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 SEPT2Q15019 361 aa4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 TTF1Q15361 905 aaPredicted RBP4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 SWI5Q1ZZU3 235 aa4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 FAM83BQ5T0W9 1011 aa4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 PDXDC2PQ6P474 469 aa4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 NYAP1Q6ZVC0 841 aa4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 KRT26Q7Z3Y9 468 aa4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 SKAP1Q86WV1 359 aa4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 RNF135Q8IUD6 432 aa4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 ZNF654Q8IZM8 581 aa4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 SPICE1Q8N0Z3 855 aa4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 NKAIN3Q8N8D7 197 aa4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 NFATC2IPQ8NCF5 419 aa4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 HELQQ8TDG4 1101 aa4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 NUDT16Q96DE0 195 aaKnown RBP4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 CFAP53Q96M91 514 aa4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 YY1AP1Q9H869 796 aa4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 MRS2Q9HD23 443 aa4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 KMT5AQ9NQR1 393 aa4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 SIRPGQ9P1W8 387 aa4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 EVLQ9UI08 416 aaPredicted RBP4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 TAGLN3Q9UI15 199 aa4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 HDAC9Q9UKV0 1011 aa4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 TMCC3Q9ULS5 477 aa4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 CHMP3Q9Y3E7 222 aa4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 CENPJQ9HC77 1338 aaPredicted RBP4.12□□□□□ -1.75
TRAJ17-201ENST00000390520 PRPF40AO75400 957 aaKnown RBP4.11□□□□□ -1.75
TRAJ17-201ENST00000390520 ABL1P00519 1130 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms