RNA–Protein interactions for RNA: ENST00000390484.1

TRAJ54-201, Transcript of T cell receptor alpha joining 54, humanhuman

APPRIS P1 BASIC

Gene TRAJ54, Length 60 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ54-201ENST00000390484 ATP13A2Q9NQ11 1180 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 SCUBE2Q9NQ36 999 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 AVENQ9NQS1 362 aaPredicted RBP-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 PAK6Q9NQU5 681 aaPredicted RBP-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 PRDM9Q9NQV7 894 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 PRDM6Q9NQX0 595 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 TSHZ2Q9NRE2 1034 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 SNRKQ9NRH2 765 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 STRN4Q9NRL3 753 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 TPSG1Q9NRR2 321 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 TMPRSS4Q9NRS4 437 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 C1GALT1Q9NS00 363 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 SEMA3GQ9NS98 782 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 LRRC4BQ9NT99 713 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 FOXD4L1Q9NU39 408 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 MBNL3Q9NUK0 354 aaKnown RBP-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 RNF19AQ9NV58 838 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 ZNF358Q9NW07 568 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 SPATA6Q9NWH7 488 aaPredicted RBP-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 GAR1Q9NY12 217 aaKnown RBP-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 MTMR4Q9NYA4 1195 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 FAM53CQ9NYF3 392 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 KCNK4Q9NYG8 393 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 EIF2AK3Q9NZJ5 1116 aaKnown RBP-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 NCKIPSDQ9NZQ3 722 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 VSX1Q9NZR4 365 aaPredicted RBP-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 CABP1Q9NZU7 370 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 CRIM1Q9NZV1 1036 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 ZBTB4Q9P1Z0 1013 aaPredicted RBP-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 RBM27Q9P2N5 1060 aaKnown RBP-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 DKK2Q9UBU2 259 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 NXF1Q9UBU9 619 aaKnown RBP-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 STK17AQ9UEE5 414 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 DAXXQ9UER7 740 aaPredicted RBP-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 ZBTB47Q9UFB7 747 aaPredicted RBP-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 CRCT1Q9UGL9 99 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 SUSD2Q9UGT4 822 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 EBF1Q9UH73 591 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 SEPT9Q9UHD8 586 aaPredicted RBP-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 STAG3Q9UJ98 1225 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 TSR3Q9UJK0 312 aaKnown RBP-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 SALL4Q9UJQ4 1053 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 DNMT3LQ9UJW3 386 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 NAGPAQ9UK23 515 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 ADAMTS6Q9UKP5 1117 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 PNMA3Q9UL41 463 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 LRFN2Q9ULH4 789 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 RNF112Q9ULX5 631 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 PLA2G2DQ9UNK4 145 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 PLAGL2Q9UPG8 496 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 IQSEC3Q9UPP2 1182 aaPredicted RBP-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 KIAA1024Q9UPX6 916 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 WASF3Q9UPY6 502 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 HPS5Q9UPZ3 1129 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 CLEC11AQ9Y240 323 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 BCS1LQ9Y276 419 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 FNDC3AQ9Y2H6 1198 aaKnown RBP-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 KDM2AQ9Y2K7 1162 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 CHTOPQ9Y3Y2 248 aaKnown RBP-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 LRP12Q9Y561 859 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 PCDHGC5Q9Y5F6 944 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 PCDHGA11Q9Y5H2 935 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 ADGRG1Q9Y653 693 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 DNMT3AQ9Y6K1 912 aaPredicted RBP-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 OAS3Q9Y6K5 1087 aaKnown RBP-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 PIEZO1Q92508 2521 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 NOTCH2Q04721 2471 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 MUC6Q6W4X9 2439 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 FLG2Q5D862 2391 aaPredicted RBP-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 CSMD3Q7Z407 3707 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 VWDEQ8N2E2 1590 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 USP24Q9UPU5 2620 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 STAB1Q9NY15 2570 aa-0.02□□□□□ -2.41
TRAJ54-201ENST00000390484 MEGF6O75095 1541 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 CACNA1AO00555 2505 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 ZFYVE26Q68DK2 2539 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 TTC28Q96AY4 2481 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 SONP18583 2426 aaKnown RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 OTOGLQ3ZCN5 2332 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 TENM2Q9NT68 2774 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 IGF1RP08069 1367 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 COL1A2P08123 1366 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 ATRNL1Q5VV63 1379 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 TNKSO95271 1327 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 AOX1Q06278 1338 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 SYNGAP1Q96PV0 1343 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 SALL3Q9BXA9 1300 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 PRR36Q9H6K5 1346 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 LTBP3Q9NS15 1303 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 ELOA3CA0A087WX78 387 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 A0A087WYN8 130 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 A0A087X002 238 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 A0A0A0MRY4 1105 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 LOC102724428A0A0B4J2F2 783 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 TEX51A0A1B0GUA7 166 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 A0A1W2PNR3 127 aa-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 A0A1W2PNU3 283 aaPredicted RBP-0.03□□□□□ -2.41
TRAJ54-201ENST00000390484 A0A1W2PPR1 153 aa-0.03□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms