RNA–Protein interactions for RNA: ENST00000390445.2

TRAV17-201, Transcript of T cell receptor alpha variable 17, humanhuman

APPRIS P1 BASIC

Gene TRAV17, Length 484 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17-201ENST00000390445 PCDH11YQ9BZA8 1340 aa11.53□□□□□ -0.56
TRAV17-201ENST00000390445 SCN11AQ9UI33 1791 aa11.52□□□□□ -0.57
TRAV17-201ENST00000390445 EYA1Q99502 592 aa11.52□□□□□ -0.57
TRAV17-201ENST00000390445 PANK3Q9H999 370 aa11.52□□□□□ -0.57
TRAV17-201ENST00000390445 POLKQ9UBT6 870 aa11.52□□□□□ -0.57
TRAV17-201ENST00000390445 CCNL1Q9UK58 526 aaPredicted RBP11.52□□□□□ -0.57
TRAV17-201ENST00000390445 GOLGB1Q14789 3259 aaKnown RBP11.52□□□□□ -0.57
TRAV17-201ENST00000390445 WASHC2AQ641Q2 1341 aa11.52□□□□□ -0.57
TRAV17-201ENST00000390445 MYH14Q7Z406 1995 aaKnown RBP11.51□□□□□ -0.57
TRAV17-201ENST00000390445 YY1P25490 414 aa11.51□□□□□ -0.57
TRAV17-201ENST00000390445 HIC1Q14526 733 aa11.51□□□□□ -0.57
TRAV17-201ENST00000390445 MPRIPQ6WCQ1 1025 aa11.51□□□□□ -0.57
TRAV17-201ENST00000390445 KCNK17Q96T54 332 aa11.51□□□□□ -0.57
TRAV17-201ENST00000390445 SYT17Q9BSW7 474 aa11.51□□□□□ -0.57
TRAV17-201ENST00000390445 TFCP2L1Q9NZI6 479 aa11.51□□□□□ -0.57
TRAV17-201ENST00000390445 COL5A3P25940 1745 aaPredicted RBP11.51□□□□□ -0.57
TRAV17-201ENST00000390445 GNPATO15228 680 aa11.5□□□□□ -0.57
TRAV17-201ENST00000390445 PTPREP23469 700 aa11.5□□□□□ -0.57
TRAV17-201ENST00000390445 CDAN1Q8IWY9 1227 aa11.5□□□□□ -0.57
TRAV17-201ENST00000390445 ARXQ96QS3 562 aa11.5□□□□□ -0.57
TRAV17-201ENST00000390445 PALLDQ8WX93 1383 aa11.5□□□□□ -0.57
TRAV17-201ENST00000390445 PSEN2P49810 448 aa11.49□□□□□ -0.57
TRAV17-201ENST00000390445 EIF4A2Q14240 407 aaKnown RBP11.49□□□□□ -0.57
TRAV17-201ENST00000390445 ZNF687Q8N1G0 1237 aa11.49□□□□□ -0.57
TRAV17-201ENST00000390445 PPP1R3GB7ZBB8 358 aa11.48□□□□□ -0.57
TRAV17-201ENST00000390445 COL23A1Q86Y22 540 aaPredicted RBP11.48□□□□□ -0.57
TRAV17-201ENST00000390445 SLC24A3Q9HC58 644 aa11.48□□□□□ -0.57
TRAV17-201ENST00000390445 C4AP0C0L4 1744 aa11.48□□□□□ -0.57
TRAV17-201ENST00000390445 MSL1Q68DK7 614 aa11.46□□□□□ -0.57
TRAV17-201ENST00000390445 SMIM5Q71RC9 77 aa11.46□□□□□ -0.57
TRAV17-201ENST00000390445 AMIGO3Q86WK7 504 aa11.46□□□□□ -0.57
TRAV17-201ENST00000390445 SLC16A10Q8TF71 515 aa11.46□□□□□ -0.57
TRAV17-201ENST00000390445 PIGBQ92521 554 aa11.46□□□□□ -0.57
TRAV17-201ENST00000390445 SPG7Q9UQ90 795 aa11.46□□□□□ -0.57
TRAV17-201ENST00000390445 N4BP2Q86UW6 1770 aaPredicted RBP11.46□□□□□ -0.58
TRAV17-201ENST00000390445 ZNF831Q5JPB2 1677 aa11.46□□□□□ -0.58
TRAV17-201ENST00000390445 MAP3K5Q99683 1374 aa11.45□□□□□ -0.58
TRAV17-201ENST00000390445 IGSF1Q8N6C5 1336 aa11.45□□□□□ -0.58
TRAV17-201ENST00000390445 PHKG2P15735 406 aa11.45□□□□□ -0.58
TRAV17-201ENST00000390445 POLD1P28340 1107 aa11.45□□□□□ -0.58
TRAV17-201ENST00000390445 PADI6Q6TGC4 694 aa11.45□□□□□ -0.58
TRAV17-201ENST00000390445 FAM198AQ9UFP1 575 aa11.45□□□□□ -0.58
TRAV17-201ENST00000390445 TJP1Q07157 1748 aa11.45□□□□□ -0.58
TRAV17-201ENST00000390445 KIF7Q2M1P5 1343 aa11.44□□□□□ -0.58
TRAV17-201ENST00000390445 ARHGAP33O14559 1287 aa11.44□□□□□ -0.58
TRAV17-201ENST00000390445 PRSS12P56730 875 aa11.44□□□□□ -0.58
TRAV17-201ENST00000390445 DMRTA1Q5VZB9 504 aa11.44□□□□□ -0.58
TRAV17-201ENST00000390445 NLGN2Q8NFZ4 835 aa11.44□□□□□ -0.58
TRAV17-201ENST00000390445 CDCA7LQ96GN5 454 aa11.44□□□□□ -0.58
TRAV17-201ENST00000390445 KIF13BQ9NQT8 1826 aa11.44□□□□□ -0.58
TRAV17-201ENST00000390445 MAP2K5Q13163 448 aa11.43□□□□□ -0.58
TRAV17-201ENST00000390445 MORC1Q86VD1 984 aa11.43□□□□□ -0.58
TRAV17-201ENST00000390445 AEBP1Q8IUX7 1158 aa11.43□□□□□ -0.58
TRAV17-201ENST00000390445 IFNL2Q8IZJ0 200 aa11.43□□□□□ -0.58
TRAV17-201ENST00000390445 KRI1Q8N9T8 703 aaKnown RBP11.43□□□□□ -0.58
TRAV17-201ENST00000390445 TTC13Q8NBP0 860 aa11.43□□□□□ -0.58
TRAV17-201ENST00000390445 LINC00116Q8NCU8 138 aa11.43□□□□□ -0.58
TRAV17-201ENST00000390445 TMOD3Q9NYL9 352 aa11.43□□□□□ -0.58
TRAV17-201ENST00000390445 ASAP1Q9ULH1 1129 aa11.43□□□□□ -0.58
TRAV17-201ENST00000390445 KIAA1551Q9HCM1 1747 aa11.43□□□□□ -0.58
TRAV17-201ENST00000390445 KDM6AO15550 1401 aaPredicted RBP11.43□□□□□ -0.58
TRAV17-201ENST00000390445 PBX2P40425 430 aa11.42□□□□□ -0.58
TRAV17-201ENST00000390445 PROX2Q3B8N5 592 aa11.42□□□□□ -0.58
TRAV17-201ENST00000390445 SMARCC1Q92922 1105 aaPredicted RBP11.42□□□□□ -0.58
TRAV17-201ENST00000390445 BRCA1P38398 1863 aaKnown RBP11.42□□□□□ -0.58
TRAV17-201ENST00000390445 LOC102724428A0A0B4J2F2 783 aa11.41□□□□□ -0.58
TRAV17-201ENST00000390445 SIK1P57059 783 aa11.41□□□□□ -0.58
TRAV17-201ENST00000390445 ITPK1Q13572 414 aa11.41□□□□□ -0.58
TRAV17-201ENST00000390445 CCDC102AQ96A19 550 aa11.41□□□□□ -0.58
TRAV17-201ENST00000390445 AK7Q96M32 723 aa11.41□□□□□ -0.58
TRAV17-201ENST00000390445 ZBED2Q9BTP6 218 aa11.41□□□□□ -0.58
TRAV17-201ENST00000390445 ATG3Q9NT62 314 aa11.41□□□□□ -0.58
TRAV17-201ENST00000390445 RBM27Q9P2N5 1060 aaKnown RBP11.41□□□□□ -0.58
TRAV17-201ENST00000390445 TSKSQ9UJT2 592 aa11.41□□□□□ -0.58
TRAV17-201ENST00000390445 KNSTRNQ9Y448 316 aa11.41□□□□□ -0.58
TRAV17-201ENST00000390445 CICQ96RK0 1608 aaPredicted RBP11.4□□□□□ -0.58
TRAV17-201ENST00000390445 IRF6O14896 467 aa11.4□□□□□ -0.58
TRAV17-201ENST00000390445 GPR162Q16538 588 aa11.4□□□□□ -0.58
TRAV17-201ENST00000390445 FAM161AQ3B820 660 aa11.4□□□□□ -0.58
TRAV17-201ENST00000390445 SIPA1L3O60292 1781 aaPredicted RBP11.4□□□□□ -0.58
TRAV17-201ENST00000390445 KDRP35968 1356 aa11.4□□□□□ -0.59
TRAV17-201ENST00000390445 C3orf80F5H4A9 247 aa11.39□□□□□ -0.59
TRAV17-201ENST00000390445 ATP6V1AP38606 617 aa11.39□□□□□ -0.59
TRAV17-201ENST00000390445 ZNF530Q6P9A1 599 aaPredicted RBP11.39□□□□□ -0.59
TRAV17-201ENST00000390445 AFDNP55196 1824 aaKnown RBP11.39□□□□□ -0.59
TRAV17-201ENST00000390445 ADAMTS7Q9UKP4 1686 aa11.39□□□□□ -0.59
TRAV17-201ENST00000390445 UBR2Q8IWV8 1755 aa11.39□□□□□ -0.59
TRAV17-201ENST00000390445 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.38□□□□□ -0.59
TRAV17-201ENST00000390445 TRIM6-TRIM34B2RNG4 842 aa11.38□□□□□ -0.59
TRAV17-201ENST00000390445 IL13P35225 146 aa11.38□□□□□ -0.59
TRAV17-201ENST00000390445 CNGB1Q14028 1251 aaPredicted RBP11.38□□□□□ -0.59
TRAV17-201ENST00000390445 PLEKHO1Q53GL0 409 aaPredicted RBP11.38□□□□□ -0.59
TRAV17-201ENST00000390445 CC2D1BQ5T0F9 858 aaKnown RBP11.38□□□□□ -0.59
TRAV17-201ENST00000390445 SULT6B1Q6IMI4 303 aa11.38□□□□□ -0.59
TRAV17-201ENST00000390445 ZNF784Q8NCA9 323 aaPredicted RBP11.38□□□□□ -0.59
TRAV17-201ENST00000390445 SLC4A9Q96Q91 983 aa11.38□□□□□ -0.59
TRAV17-201ENST00000390445 PLEKHG2Q9H7P9 1386 aa11.38□□□□□ -0.59
TRAV17-201ENST00000390445 YBX3P16989 372 aaKnown RBP eCLIP11.37□□□□□ -0.59
TRAV17-201ENST00000390445 FLAD1Q8NFF5 587 aa11.37□□□□□ -0.59
TRAV17-201ENST00000390445 DLG5Q8TDM6 1919 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms