RNA–Protein interactions for RNA: ENST00000390435.1

TRAV8-3-201, Transcript of T cell receptor alpha variable 8-3, humanhuman

APPRIS P1 BASIC

Gene TRAV8-3, Length 341 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3-201ENST00000390435 NBPF26B4DH59 902 aa9.69□□□□□ -0.86
TRAV8-3-201ENST00000390435 ERVV-1B6SEH8 477 aa9.69□□□□□ -0.86
TRAV8-3-201ENST00000390435 RGL2O15211 777 aa9.69□□□□□ -0.86
TRAV8-3-201ENST00000390435 RARSP54136 660 aaKnown RBP9.69□□□□□ -0.86
TRAV8-3-201ENST00000390435 NBPF10Q6P3W6 841 aaKnown RBP9.69□□□□□ -0.86
TRAV8-3-201ENST00000390435 ANKRD13DQ6ZTN6 518 aa9.69□□□□□ -0.86
TRAV8-3-201ENST00000390435 NBPF15Q8N660 670 aa9.69□□□□□ -0.86
TRAV8-3-201ENST00000390435 SSH1Q8WYL5 1049 aa9.69□□□□□ -0.86
TRAV8-3-201ENST00000390435 FRAT1Q92837 279 aaPredicted RBP9.69□□□□□ -0.86
TRAV8-3-201ENST00000390435 API5Q9BZZ5 524 aaKnown RBP9.69□□□□□ -0.86
TRAV8-3-201ENST00000390435 ZBTB3Q9H5J0 574 aa9.69□□□□□ -0.86
TRAV8-3-201ENST00000390435 USP42Q9H9J4 1324 aaKnown RBP9.69□□□□□ -0.86
TRAV8-3-201ENST00000390435 TBC1D2BQ9UPU7 963 aa9.69□□□□□ -0.86
TRAV8-3-201ENST00000390435 PSDA5PKW4 1024 aaPredicted RBP9.68□□□□□ -0.86
TRAV8-3-201ENST00000390435 POLD1P28340 1107 aa9.68□□□□□ -0.86
TRAV8-3-201ENST00000390435 PROSER3Q2NL68 480 aa9.68□□□□□ -0.86
TRAV8-3-201ENST00000390435 USPL1Q5W0Q7 1092 aa9.68□□□□□ -0.86
TRAV8-3-201ENST00000390435 CLEC4GQ6UXB4 293 aa9.68□□□□□ -0.86
TRAV8-3-201ENST00000390435 COL23A1Q86Y22 540 aaPredicted RBP9.68□□□□□ -0.86
TRAV8-3-201ENST00000390435 FTSJ3Q8IY81 847 aaKnown RBP9.68□□□□□ -0.86
TRAV8-3-201ENST00000390435 NLGN1Q8N2Q7 840 aa9.68□□□□□ -0.86
TRAV8-3-201ENST00000390435 MRPL50Q8N5N7 158 aaKnown RBP9.68□□□□□ -0.86
TRAV8-3-201ENST00000390435 PLBD2Q8NHP8 589 aa9.68□□□□□ -0.86
TRAV8-3-201ENST00000390435 CASZ1Q86V15 1759 aa9.68□□□□□ -0.86
TRAV8-3-201ENST00000390435 PDIA6Q15084 440 aa9.67□□□□□ -0.86
TRAV8-3-201ENST00000390435 ZKSCAN2Q63HK3 967 aa9.67□□□□□ -0.86
TRAV8-3-201ENST00000390435 KSR2Q6VAB6 950 aa9.67□□□□□ -0.86
TRAV8-3-201ENST00000390435 TTLL7Q6ZT98 887 aa9.67□□□□□ -0.86
TRAV8-3-201ENST00000390435 SETDB2Q96T68 719 aa9.67□□□□□ -0.86
TRAV8-3-201ENST00000390435 PHAXQ9H814 394 aaKnown RBP9.67□□□□□ -0.86
TRAV8-3-201ENST00000390435 PARP3Q9Y6F1 533 aa9.67□□□□□ -0.86
TRAV8-3-201ENST00000390435 PI4KAP2A4QPH2 592 aa9.66□□□□□ -0.86
TRAV8-3-201ENST00000390435 CAMTA2O94983 1202 aa9.66□□□□□ -0.86
TRAV8-3-201ENST00000390435 GTF2E1P29083 439 aaPredicted RBP9.66□□□□□ -0.86
TRAV8-3-201ENST00000390435 BRPF1P55201 1214 aaPredicted RBP9.66□□□□□ -0.86
TRAV8-3-201ENST00000390435 SLC4A10Q6U841 1118 aa9.66□□□□□ -0.86
TRAV8-3-201ENST00000390435 GIGYF2Q6Y7W6 1299 aaKnown RBP9.66□□□□□ -0.86
TRAV8-3-201ENST00000390435 PPP1R42Q7Z4L9 355 aa9.66□□□□□ -0.86
TRAV8-3-201ENST00000390435 PI4KAP1Q8N8J0 262 aa9.66□□□□□ -0.86
TRAV8-3-201ENST00000390435 DNAAF4Q8WXU2 420 aa9.66□□□□□ -0.86
TRAV8-3-201ENST00000390435 NYXQ9GZU5 481 aa9.66□□□□□ -0.86
TRAV8-3-201ENST00000390435 MTFR1LQ9H019 292 aa9.66□□□□□ -0.86
TRAV8-3-201ENST00000390435 SRP68Q9UHB9 627 aaKnown RBP9.66□□□□□ -0.86
TRAV8-3-201ENST00000390435 NOB1Q9ULX3 412 aaKnown RBP9.66□□□□□ -0.86
TRAV8-3-201ENST00000390435 NIP7Q9Y221 180 aaKnown RBP eCLIP9.66□□□□□ -0.86
TRAV8-3-201ENST00000390435 MAP3K2Q9Y2U5 619 aa9.66□□□□□ -0.86
TRAV8-3-201ENST00000390435 PXDNLA1KZ92 1463 aa9.66□□□□□ -0.86
TRAV8-3-201ENST00000390435 CARMIL3Q8ND23 1372 aa9.65□□□□□ -0.86
TRAV8-3-201ENST00000390435 BCAR3O75815 825 aa9.65□□□□□ -0.86
TRAV8-3-201ENST00000390435 GYS1P13807 737 aa9.65□□□□□ -0.86
TRAV8-3-201ENST00000390435 HSP90B1P14625 803 aaKnown RBP9.65□□□□□ -0.86
TRAV8-3-201ENST00000390435 PARP10Q53GL7 1025 aa9.65□□□□□ -0.86
TRAV8-3-201ENST00000390435 MSL1Q68DK7 614 aa9.65□□□□□ -0.86
TRAV8-3-201ENST00000390435 BICDL1Q6ZP65 573 aa9.65□□□□□ -0.86
TRAV8-3-201ENST00000390435 SMIM5Q71RC9 77 aa9.65□□□□□ -0.86
TRAV8-3-201ENST00000390435 G2E3Q7L622 706 aa9.65□□□□□ -0.86
TRAV8-3-201ENST00000390435 ARHGAP45Q92619 1136 aa9.65□□□□□ -0.86
TRAV8-3-201ENST00000390435 MYD88Q99836 296 aa9.65□□□□□ -0.86
TRAV8-3-201ENST00000390435 N4BP2Q86UW6 1770 aaPredicted RBP9.65□□□□□ -0.87
TRAV8-3-201ENST00000390435 ATP10DQ9P241 1426 aa9.65□□□□□ -0.87
TRAV8-3-201ENST00000390435 ZBTB7AO95365 584 aa9.64□□□□□ -0.87
TRAV8-3-201ENST00000390435 CCT4P50991 539 aaKnown RBP9.64□□□□□ -0.87
TRAV8-3-201ENST00000390435 ST5P78524 1137 aa9.64□□□□□ -0.87
TRAV8-3-201ENST00000390435 TCIRG1Q13488 830 aa9.64□□□□□ -0.87
TRAV8-3-201ENST00000390435 ATF7IPQ6VMQ6 1270 aa9.64□□□□□ -0.87
TRAV8-3-201ENST00000390435 LRP10Q7Z4F1 713 aa9.64□□□□□ -0.87
TRAV8-3-201ENST00000390435 METTL22Q9BUU2 404 aaPredicted RBP9.64□□□□□ -0.87
TRAV8-3-201ENST00000390435 SRCIN1Q9C0H9 1055 aa9.64□□□□□ -0.87
TRAV8-3-201ENST00000390435 CHMP4BQ9H444 224 aaKnown RBP9.64□□□□□ -0.87
TRAV8-3-201ENST00000390435 SPON1Q9HCB6 807 aa9.64□□□□□ -0.87
TRAV8-3-201ENST00000390435 PPP1R1BQ9UD71 204 aaPredicted RBP9.64□□□□□ -0.87
TRAV8-3-201ENST00000390435 HDAC5Q9UQL6 1122 aa9.64□□□□□ -0.87
TRAV8-3-201ENST00000390435 GPTP24298 496 aa9.63□□□□□ -0.87
TRAV8-3-201ENST00000390435 FKBP8Q14318 412 aa9.63□□□□□ -0.87
TRAV8-3-201ENST00000390435 AMIGO3Q86WK7 504 aa9.63□□□□□ -0.87
TRAV8-3-201ENST00000390435 NBPF5PQ86XG9 351 aaPredicted RBP9.63□□□□□ -0.87
TRAV8-3-201ENST00000390435 DZIP1LQ8IYY4 767 aaKnown RBP9.63□□□□□ -0.87
TRAV8-3-201ENST00000390435 CCDC191Q8NCU4 936 aa9.63□□□□□ -0.87
TRAV8-3-201ENST00000390435 LINS1Q8NG48 757 aa9.63□□□□□ -0.87
TRAV8-3-201ENST00000390435 CWC25Q9NXE8 425 aaPredicted RBP9.63□□□□□ -0.87
TRAV8-3-201ENST00000390435 ADCY9O60503 1353 aa9.63□□□□□ -0.87
TRAV8-3-201ENST00000390435 COL24A1Q17RW2 1714 aa9.62□□□□□ -0.87
TRAV8-3-201ENST00000390435 RNF123Q5XPI4 1314 aa9.62□□□□□ -0.87
TRAV8-3-201ENST00000390435 FAM177BA6PVY3 158 aa9.62□□□□□ -0.87
TRAV8-3-201ENST00000390435 F6X3S4 739 aa9.62□□□□□ -0.87
TRAV8-3-201ENST00000390435 MMP10P09238 476 aa9.62□□□□□ -0.87
TRAV8-3-201ENST00000390435 HLFQ16534 295 aa9.62□□□□□ -0.87
TRAV8-3-201ENST00000390435 TBC1D9BQ66K14 1250 aa9.62□□□□□ -0.87
TRAV8-3-201ENST00000390435 TPTE2Q6XPS3 522 aa9.62□□□□□ -0.87
TRAV8-3-201ENST00000390435 CNBD1Q8NA66 436 aa9.62□□□□□ -0.87
TRAV8-3-201ENST00000390435 UTP14AQ9BVJ6 771 aaKnown RBP9.62□□□□□ -0.87
TRAV8-3-201ENST00000390435 C9orf78Q9NZ63 289 aaPredicted RBP9.62□□□□□ -0.87
TRAV8-3-201ENST00000390435 ATF5Q9Y2D1 282 aaPredicted RBP9.62□□□□□ -0.87
TRAV8-3-201ENST00000390435 MYH3P11055 1940 aa9.62□□□□□ -0.87
TRAV8-3-201ENST00000390435 IBTKQ9P2D0 1353 aaPredicted RBP9.62□□□□□ -0.87
TRAV8-3-201ENST00000390435 ATP5J2-PTCD1G3V325 749 aa9.61□□□□□ -0.87
TRAV8-3-201ENST00000390435 ALDH1L1O75891 902 aa9.61□□□□□ -0.87
TRAV8-3-201ENST00000390435 SERPINB2P05120 415 aa9.61□□□□□ -0.87
TRAV8-3-201ENST00000390435 RRP1P56182 461 aaKnown RBP9.61□□□□□ -0.87
TRAV8-3-201ENST00000390435 NFIXQ14938 502 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms