RNA–Protein interactions for RNA: ENST00000390426.2

TRAV4-201, Transcript of T cell receptor alpha variable 4, humanhuman

APPRIS P1 BASIC

Gene TRAV4, Length 395 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4-201ENST00000390426 ZNF652Q9Y2D9 606 aa14.17□□□□□ -0.14
TRAV4-201ENST00000390426 DLEC1Q9Y238 1755 aa14.17□□□□□ -0.14
TRAV4-201ENST00000390426 SBF1O95248 1867 aa14.16□□□□□ -0.14
TRAV4-201ENST00000390426 SRGNP10124 158 aa14.16□□□□□ -0.14
TRAV4-201ENST00000390426 STYK1Q6J9G0 422 aa14.16□□□□□ -0.14
TRAV4-201ENST00000390426 CNKSR1Q969H4 720 aa14.16□□□□□ -0.14
TRAV4-201ENST00000390426 NIP7Q9Y221 180 aaKnown RBP eCLIP14.16□□□□□ -0.14
TRAV4-201ENST00000390426 MAPK8IP3Q9UPT6 1336 aa14.15□□□□□ -0.14
TRAV4-201ENST00000390426 GLTPD2A6NH11 291 aa14.15□□□□□ -0.14
TRAV4-201ENST00000390426 EIF4A1P60842 406 aaKnown RBP14.15□□□□□ -0.14
TRAV4-201ENST00000390426 HLFQ16534 295 aa14.15□□□□□ -0.14
TRAV4-201ENST00000390426 MASTLQ96GX5 879 aa14.15□□□□□ -0.14
TRAV4-201ENST00000390426 PNNQ9H307 717 aaKnown RBP14.15□□□□□ -0.14
TRAV4-201ENST00000390426 RRP7AQ9Y3A4 280 aaKnown RBP14.15□□□□□ -0.14
TRAV4-201ENST00000390426 ZC3H4Q9UPT8 1303 aaKnown RBP14.15□□□□□ -0.15
TRAV4-201ENST00000390426 FSTL1Q12841 308 aa14.14□□□□□ -0.15
TRAV4-201ENST00000390426 PRPF40BQ6NWY9 871 aaKnown RBP14.14□□□□□ -0.15
TRAV4-201ENST00000390426 TPTE2Q6XPS3 522 aa14.14□□□□□ -0.15
TRAV4-201ENST00000390426 BCORQ6W2J9 1755 aa14.14□□□□□ -0.15
TRAV4-201ENST00000390426 COL11A2P13942 1736 aaPredicted RBP14.13□□□□□ -0.15
TRAV4-201ENST00000390426 HTRA3P83110 453 aa14.13□□□□□ -0.15
TRAV4-201ENST00000390426 DDX10Q13206 875 aaKnown RBP14.13□□□□□ -0.15
TRAV4-201ENST00000390426 ERFEQ4G0M1 354 aa14.13□□□□□ -0.15
TRAV4-201ENST00000390426 RGL2O15211 777 aa14.12□□□□□ -0.15
TRAV4-201ENST00000390426 MYL6BP14649 208 aa14.12□□□□□ -0.15
TRAV4-201ENST00000390426 VEGFAP15692 232 aaPredicted RBP14.12□□□□□ -0.15
TRAV4-201ENST00000390426 RALBP1Q15311 655 aa14.12□□□□□ -0.15
TRAV4-201ENST00000390426 DNAJC5GQ8N7S2 189 aa14.12□□□□□ -0.15
TRAV4-201ENST00000390426 TAOK3Q9H2K8 898 aa14.12□□□□□ -0.15
TRAV4-201ENST00000390426 NPR1P16066 1061 aa14.11□□□□□ -0.15
TRAV4-201ENST00000390426 GTF2E1P29083 439 aaPredicted RBP14.11□□□□□ -0.15
TRAV4-201ENST00000390426 RIPK4P57078 832 aa14.11□□□□□ -0.15
TRAV4-201ENST00000390426 DPY19L2Q6NUT2 758 aa14.11□□□□□ -0.15
TRAV4-201ENST00000390426 TTLL7Q6ZT98 887 aa14.11□□□□□ -0.15
TRAV4-201ENST00000390426 SMC1BQ8NDV3 1235 aa14.11□□□□□ -0.15
TRAV4-201ENST00000390426 DLG5Q8TDM6 1919 aa14.11□□□□□ -0.15
TRAV4-201ENST00000390426 LTBP3Q9NS15 1303 aa14.11□□□□□ -0.15
TRAV4-201ENST00000390426 SLX4Q8IY92 1834 aa14.11□□□□□ -0.15
TRAV4-201ENST00000390426 KLRG2A4D1S0 409 aaPredicted RBP14.1□□□□□ -0.15
TRAV4-201ENST00000390426 POTECB2RU33 542 aa14.1□□□□□ -0.15
TRAV4-201ENST00000390426 SOGA3Q5TF21 947 aa14.1□□□□□ -0.15
TRAV4-201ENST00000390426 C7orf43Q8WVR3 580 aa14.1□□□□□ -0.15
TRAV4-201ENST00000390426 TSPYL4Q9UJ04 414 aa14.1□□□□□ -0.15
TRAV4-201ENST00000390426 TNRC6CQ9HCJ0 1690 aaKnown RBP14.1□□□□□ -0.15
TRAV4-201ENST00000390426 MAP3K15Q6ZN16 1313 aa14.1□□□□□ -0.15
TRAV4-201ENST00000390426 KDM3BQ7LBC6 1761 aa14.09□□□□□ -0.15
TRAV4-201ENST00000390426 ERVV-1B6SEH8 477 aa14.09□□□□□ -0.15
TRAV4-201ENST00000390426 CCDC93Q567U6 631 aa14.09□□□□□ -0.15
TRAV4-201ENST00000390426 OLFM4Q6UX06 510 aa14.09□□□□□ -0.15
TRAV4-201ENST00000390426 KIF6Q6ZMV9 814 aa14.09□□□□□ -0.15
TRAV4-201ENST00000390426 NUTM1Q86Y26 1132 aa14.09□□□□□ -0.15
TRAV4-201ENST00000390426 ZBTB3Q9H5J0 574 aa14.09□□□□□ -0.15
TRAV4-201ENST00000390426 CCDC88AQ3V6T2 1871 aa14.09□□□□□ -0.15
TRAV4-201ENST00000390426 CEP350Q5VT06 3117 aa14.08□□□□□ -0.16
TRAV4-201ENST00000390426 DDNO94850 711 aaPredicted RBP14.08□□□□□ -0.16
TRAV4-201ENST00000390426 EIF2S2P20042 333 aaKnown RBP14.08□□□□□ -0.16
TRAV4-201ENST00000390426 GPTP24298 496 aa14.08□□□□□ -0.16
TRAV4-201ENST00000390426 TMPOP42166 694 aaKnown RBP14.08□□□□□ -0.16
TRAV4-201ENST00000390426 CCDC146Q8IYE0 955 aa14.08□□□□□ -0.16
TRAV4-201ENST00000390426 TIAM2Q8IVF5 1701 aa14.07□□□□□ -0.16
TRAV4-201ENST00000390426 LAMB4A4D0S4 1761 aa14.07□□□□□ -0.16
TRAV4-201ENST00000390426 NEUROD2Q15784 382 aa14.07□□□□□ -0.16
TRAV4-201ENST00000390426 NYXQ9GZU5 481 aa14.07□□□□□ -0.16
TRAV4-201ENST00000390426 FER1L6Q2WGJ9 1857 aa14.07□□□□□ -0.16
TRAV4-201ENST00000390426 MYBBP1AQ9BQG0 1328 aaKnown RBP14.07□□□□□ -0.16
TRAV4-201ENST00000390426 ABCC12Q96J65 1359 aa14.07□□□□□ -0.16
TRAV4-201ENST00000390426 ALDH1B1P30837 517 aa14.06□□□□□ -0.16
TRAV4-201ENST00000390426 FKBP4Q02790 459 aaKnown RBP eCLIP14.06□□□□□ -0.16
TRAV4-201ENST00000390426 SUSD4Q5VX71 490 aa14.06□□□□□ -0.16
TRAV4-201ENST00000390426 ZNF277Q9NRM2 450 aaPredicted RBP14.06□□□□□ -0.16
TRAV4-201ENST00000390426 UBN2Q6ZU65 1347 aa14.06□□□□□ -0.16
TRAV4-201ENST00000390426 CACNA1SQ13698 1873 aa14.06□□□□□ -0.16
TRAV4-201ENST00000390426 ANXA1P04083 346 aa14.05□□□□□ -0.16
TRAV4-201ENST00000390426 LMOD3Q0VAK6 560 aa14.05□□□□□ -0.16
TRAV4-201ENST00000390426 PDIA6Q15084 440 aa14.05□□□□□ -0.16
TRAV4-201ENST00000390426 GIGYF2Q6Y7W6 1299 aaKnown RBP14.05□□□□□ -0.16
TRAV4-201ENST00000390426 ZNF34Q8IZ26 560 aa14.05□□□□□ -0.16
TRAV4-201ENST00000390426 NECTIN2Q92692 538 aa14.05□□□□□ -0.16
TRAV4-201ENST00000390426 KLRG1Q96E93 195 aa14.05□□□□□ -0.16
TRAV4-201ENST00000390426 ERBB4Q15303 1308 aa14.05□□□□□ -0.16
TRAV4-201ENST00000390426 WDR90Q96KV7 1748 aa14.04□□□□□ -0.16
TRAV4-201ENST00000390426 PROSER3Q2NL68 480 aa14.04□□□□□ -0.16
TRAV4-201ENST00000390426 IFFO2Q5TF58 517 aa14.04□□□□□ -0.16
TRAV4-201ENST00000390426 RTKN2Q8IZC4 609 aa14.04□□□□□ -0.16
TRAV4-201ENST00000390426 SYNE4Q8N205 404 aa14.04□□□□□ -0.16
TRAV4-201ENST00000390426 NTSR2O95665 410 aa14.03□□□□□ -0.16
TRAV4-201ENST00000390426 WDR43Q15061 677 aaKnown RBP eCLIP14.03□□□□□ -0.16
TRAV4-201ENST00000390426 CRY2Q49AN0 593 aa14.03□□□□□ -0.16
TRAV4-201ENST00000390426 LRP10Q7Z4F1 713 aa14.03□□□□□ -0.16
TRAV4-201ENST00000390426 RPGRQ92834 1020 aaKnown RBP14.03□□□□□ -0.16
TRAV4-201ENST00000390426 RUNDC1Q96C34 613 aa14.03□□□□□ -0.16
TRAV4-201ENST00000390426 BABAM1Q9NWV8 329 aa14.03□□□□□ -0.16
TRAV4-201ENST00000390426 LAS1LQ9Y4W2 734 aaKnown RBP14.03□□□□□ -0.16
TRAV4-201ENST00000390426 ARFGEF2Q9Y6D5 1785 aa14.03□□□□□ -0.16
TRAV4-201ENST00000390426 DICER1Q9UPY3 1922 aaKnown RBP14.03□□□□□ -0.16
TRAV4-201ENST00000390426 POTEIP0CG38 1075 aa14.02□□□□□ -0.17
TRAV4-201ENST00000390426 POTEJP0CG39 1038 aa14.02□□□□□ -0.17
TRAV4-201ENST00000390426 AIMP1Q12904 312 aaKnown RBP14.02□□□□□ -0.17
TRAV4-201ENST00000390426 KRT24Q2M2I5 525 aa14.02□□□□□ -0.17
TRAV4-201ENST00000390426 PPP1R42Q7Z4L9 355 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms