RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 CHL1O00533 1208 aa17.76■□□□□ 0.43
CTNS-202ENST00000381870 NUTM1Q86Y26 1132 aa17.76■□□□□ 0.43
CTNS-202ENST00000381870 LSG1Q9H089 658 aaKnown RBP17.76■□□□□ 0.43
CTNS-202ENST00000381870 DNAJC25Q9H1X3 360 aa17.76■□□□□ 0.43
CTNS-202ENST00000381870 TRMT1Q9NXH9 659 aaKnown RBP17.76■□□□□ 0.43
CTNS-202ENST00000381870 SGSM2O43147 1006 aa17.76■□□□□ 0.43
CTNS-202ENST00000381870 CYP2C19P33261 490 aa17.76■□□□□ 0.43
CTNS-202ENST00000381870 ST3GAL1Q11201 340 aa17.76■□□□□ 0.43
CTNS-202ENST00000381870 GTF3C6Q969F1 213 aa17.76■□□□□ 0.43
CTNS-202ENST00000381870 CHMP4AQ9BY43 222 aa17.76■□□□□ 0.43
CTNS-202ENST00000381870 ZRANB1Q9UGI0 708 aa17.76■□□□□ 0.43
CTNS-202ENST00000381870 CCDC171Q6TFL3 1326 aa17.76■□□□□ 0.43
CTNS-202ENST00000381870 ZNF165P49910 485 aa17.75■□□□□ 0.43
CTNS-202ENST00000381870 HAP1P54257 671 aaPredicted RBP17.75■□□□□ 0.43
CTNS-202ENST00000381870 PTPRMP28827 1452 aa17.75■□□□□ 0.43
CTNS-202ENST00000381870 EPB41L2O43491 1005 aaKnown RBP17.75■□□□□ 0.43
CTNS-202ENST00000381870 CCT4P50991 539 aaKnown RBP17.75■□□□□ 0.43
CTNS-202ENST00000381870 KRT85P78386 507 aa17.75■□□□□ 0.43
CTNS-202ENST00000381870 MLECQ14165 292 aa17.75■□□□□ 0.43
CTNS-202ENST00000381870 AEBP1Q8IUX7 1158 aa17.75■□□□□ 0.43
CTNS-202ENST00000381870 CDK12Q9NYV4 1490 aaPredicted RBP17.75■□□□□ 0.43
CTNS-202ENST00000381870 NEXMIFQ5QGS0 1516 aa17.74■□□□□ 0.43
CTNS-202ENST00000381870 SLFNL1Q499Z3 407 aa17.74■□□□□ 0.43
CTNS-202ENST00000381870 NECAB1Q8N987 351 aa17.74■□□□□ 0.43
CTNS-202ENST00000381870 MIS18AQ9NYP9 233 aa17.74■□□□□ 0.43
CTNS-202ENST00000381870 SPG7Q9UQ90 795 aa17.74■□□□□ 0.43
CTNS-202ENST00000381870 RRS1Q15050 365 aaKnown RBP17.74■□□□□ 0.43
CTNS-202ENST00000381870 CDC37L1Q7L3B6 337 aa17.74■□□□□ 0.43
CTNS-202ENST00000381870 FRMPD1Q5SYB0 1578 aa17.73■□□□□ 0.43
CTNS-202ENST00000381870 SLU7O95391 586 aaKnown RBP17.73■□□□□ 0.43
CTNS-202ENST00000381870 SKILP12757 684 aa17.73■□□□□ 0.43
CTNS-202ENST00000381870 DDX54Q8TDD1 881 aaKnown RBP17.73■□□□□ 0.43
CTNS-202ENST00000381870 ATP8B2P98198 1209 aa17.73■□□□□ 0.43
CTNS-202ENST00000381870 ADCK5Q3MIX3 580 aa17.72■□□□□ 0.43
CTNS-202ENST00000381870 NME9Q86XW9 330 aa17.72■□□□□ 0.43
CTNS-202ENST00000381870 TFIP11Q9UBB9 837 aaKnown RBP17.72■□□□□ 0.43
CTNS-202ENST00000381870 FEZ2Q9UHY8 353 aaPredicted RBP17.72■□□□□ 0.43
CTNS-202ENST00000381870 CDC25BP30305 580 aa17.72■□□□□ 0.43
CTNS-202ENST00000381870 FAM193AP78312 1265 aa17.72■□□□□ 0.43
CTNS-202ENST00000381870 CLSTN2Q9H4D0 955 aa17.72■□□□□ 0.43
CTNS-202ENST00000381870 PDRG1Q9NUG6 133 aa17.72■□□□□ 0.43
CTNS-202ENST00000381870 FHOD1Q9Y613 1164 aa17.72■□□□□ 0.43
CTNS-202ENST00000381870 NR1I2O75469 434 aa17.71■□□□□ 0.43
CTNS-202ENST00000381870 BMS1Q14692 1282 aaKnown RBP17.71■□□□□ 0.43
CTNS-202ENST00000381870 ME3Q16798 604 aa17.71■□□□□ 0.43
CTNS-202ENST00000381870 ERCC6LQ2NKX8 1250 aa17.71■□□□□ 0.43
CTNS-202ENST00000381870 LARP1BQ659C4 914 aaKnown RBP17.71■□□□□ 0.43
CTNS-202ENST00000381870 CWC27Q6UX04 472 aaKnown RBP17.71■□□□□ 0.43
CTNS-202ENST00000381870 RBM43Q6ZSC3 357 aaKnown RBP17.71■□□□□ 0.43
CTNS-202ENST00000381870 LRRN4CLQ8ND94 238 aa17.71■□□□□ 0.43
CTNS-202ENST00000381870 KIDINS220Q9ULH0 1771 aa17.71■□□□□ 0.43
CTNS-202ENST00000381870 ELP1O95163 1332 aa17.71■□□□□ 0.43
CTNS-202ENST00000381870 GOLGA6L4A6NEF3 574 aa17.71■□□□□ 0.42
CTNS-202ENST00000381870 JAKMIP1Q96N16 626 aaKnown RBP17.71■□□□□ 0.42
CTNS-202ENST00000381870 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.71■□□□□ 0.42
CTNS-202ENST00000381870 TTC21AQ8NDW8 1320 aa17.7■□□□□ 0.42
CTNS-202ENST00000381870 CLTCQ00610 1675 aaKnown RBP17.7■□□□□ 0.42
CTNS-202ENST00000381870 H2AFXP16104 143 aaPredicted RBP17.7■□□□□ 0.42
CTNS-202ENST00000381870 RAD51AP2Q09MP3 1159 aa17.7■□□□□ 0.42
CTNS-202ENST00000381870 USP16Q9Y5T5 823 aa17.7■□□□□ 0.42
CTNS-202ENST00000381870 CCDC69A6NI79 296 aa17.7■□□□□ 0.42
CTNS-202ENST00000381870 CCZ1BP86790 482 aa17.7■□□□□ 0.42
CTNS-202ENST00000381870 CCZ1P86791 482 aaPredicted RBP17.7■□□□□ 0.42
CTNS-202ENST00000381870 CERS3Q8IU89 383 aa17.7■□□□□ 0.42
CTNS-202ENST00000381870 CREBRFQ8IUR6 639 aa17.7■□□□□ 0.42
CTNS-202ENST00000381870 CCAR2Q8N163 923 aaKnown RBP17.7■□□□□ 0.42
CTNS-202ENST00000381870 PI4K2BQ8TCG2 481 aa17.7■□□□□ 0.42
CTNS-202ENST00000381870 AOX1Q06278 1338 aa17.69■□□□□ 0.42
CTNS-202ENST00000381870 FILIP1Q7Z7B0 1213 aa17.69■□□□□ 0.42
CTNS-202ENST00000381870 SPATA32Q96LK8 384 aa17.69■□□□□ 0.42
CTNS-202ENST00000381870 DDX19AQ9NUU7 478 aaKnown RBP17.69■□□□□ 0.42
CTNS-202ENST00000381870 LRRFIP2Q9Y608 721 aaKnown RBP17.69■□□□□ 0.42
CTNS-202ENST00000381870 PLA2G4AP47712 749 aa17.69■□□□□ 0.42
CTNS-202ENST00000381870 CLCN6P51797 869 aa17.69■□□□□ 0.42
CTNS-202ENST00000381870 VPS53Q5VIR6 699 aa17.69■□□□□ 0.42
CTNS-202ENST00000381870 SYTL4Q96C24 671 aaPredicted RBP17.69■□□□□ 0.42
CTNS-202ENST00000381870 PREX1Q8TCU6 1659 aa17.69■□□□□ 0.42
CTNS-202ENST00000381870 MLH3Q9UHC1 1453 aa17.68■□□□□ 0.42
CTNS-202ENST00000381870 IQCB1Q15051 598 aa17.67■□□□□ 0.42
CTNS-202ENST00000381870 SULT6B1Q6IMI4 303 aa17.67■□□□□ 0.42
CTNS-202ENST00000381870 NEK11Q8NG66 645 aa17.67■□□□□ 0.42
CTNS-202ENST00000381870 ZSCAN31Q96LW9 406 aaPredicted RBP17.67■□□□□ 0.42
CTNS-202ENST00000381870 SH2B1Q9NRF2 756 aaPredicted RBP17.67■□□□□ 0.42
CTNS-202ENST00000381870 RICTORQ6R327 1708 aa17.67■□□□□ 0.42
CTNS-202ENST00000381870 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.67■□□□□ 0.42
CTNS-202ENST00000381870 NEMFO60524 1076 aa17.67■□□□□ 0.42
CTNS-202ENST00000381870 PNMA6AP0CW24 399 aaPredicted RBP17.67■□□□□ 0.42
CTNS-202ENST00000381870 PTH1RQ03431 593 aa17.67■□□□□ 0.42
CTNS-202ENST00000381870 PRPF40BQ6NWY9 871 aaKnown RBP17.67■□□□□ 0.42
CTNS-202ENST00000381870 C11orf57Q6ZUT1 292 aaPredicted RBP17.67■□□□□ 0.42
CTNS-202ENST00000381870 LEO1Q8WVC0 666 aaPredicted RBP17.67■□□□□ 0.42
CTNS-202ENST00000381870 TPCN1Q9ULQ1 816 aa17.67■□□□□ 0.42
CTNS-202ENST00000381870 GOLGA6L19H0YKK7 550 aa17.66■□□□□ 0.42
CTNS-202ENST00000381870 GNAI3P08754 354 aa17.66■□□□□ 0.42
CTNS-202ENST00000381870 IDI1Q13907 227 aa17.66■□□□□ 0.42
CTNS-202ENST00000381870 PGBD1Q96JS3 809 aa17.66■□□□□ 0.42
CTNS-202ENST00000381870 TSPYL1Q9H0U9 437 aa17.66■□□□□ 0.42
CTNS-202ENST00000381870 NPHP3Q7Z494 1330 aa17.66■□□□□ 0.42
CTNS-202ENST00000381870 COL9A3Q14050 684 aaPredicted RBP17.66■□□□□ 0.42
CTNS-202ENST00000381870 BICD2Q8TD16 824 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms