RNA–Protein interactions for RNA: ENST00000381209.7

RPAIN-203, Transcript of RPA interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPAIN, Length 1,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-203ENST00000381209 CASC1Q6TDU7 716 aa21.27■■□□□ 1
RPAIN-203ENST00000381209 BCL11AQ9H165 835 aa21.27■■□□□ 1
RPAIN-203ENST00000381209 LRP6O75581 1613 aa21.27■■□□□ 1
RPAIN-203ENST00000381209 SPATA31A1Q5TZJ5 1347 aa21.26■□□□□ 0.99
RPAIN-203ENST00000381209 PIP4K2AP48426 406 aaPredicted RBP21.26■□□□□ 0.99
RPAIN-203ENST00000381209 KAZALD1Q96I82 304 aa21.26■□□□□ 0.99
RPAIN-203ENST00000381209 SLC4A3P48751 1232 aa21.25■□□□□ 0.99
RPAIN-203ENST00000381209 PIP4K2BP78356 416 aa21.25■□□□□ 0.99
RPAIN-203ENST00000381209 ERC1Q8IUD2 1116 aa21.25■□□□□ 0.99
RPAIN-203ENST00000381209 TOGARAM1Q9Y4F4 1720 aa21.25■□□□□ 0.99
RPAIN-203ENST00000381209 A1BGP04217 495 aa21.24■□□□□ 0.99
RPAIN-203ENST00000381209 ATG3Q9NT62 314 aa21.24■□□□□ 0.99
RPAIN-203ENST00000381209 BICC1Q9H694 974 aaKnown RBP21.24■□□□□ 0.99
RPAIN-203ENST00000381209 BCL9O00512 1426 aa21.23■□□□□ 0.99
RPAIN-203ENST00000381209 IL1RAPL2Q9NP60 686 aa21.23■□□□□ 0.99
RPAIN-203ENST00000381209 ASAP1Q9ULH1 1129 aa21.23■□□□□ 0.99
RPAIN-203ENST00000381209 SPATA31A5Q5VU36 1347 aa21.22■□□□□ 0.99
RPAIN-203ENST00000381209 SPATA31A7Q8IWB4 1347 aa21.22■□□□□ 0.99
RPAIN-203ENST00000381209 OS9Q13438 667 aaPredicted RBP21.21■□□□□ 0.99
RPAIN-203ENST00000381209 SLIT2O94813 1529 aa21.21■□□□□ 0.99
RPAIN-203ENST00000381209 USP42Q9H9J4 1324 aaKnown RBP21.21■□□□□ 0.99
RPAIN-203ENST00000381209 NUTM2BA6NNL0 878 aaPredicted RBP21.2■□□□□ 0.98
RPAIN-203ENST00000381209 NUTM2EB1AL46 878 aaPredicted RBP21.2■□□□□ 0.98
RPAIN-203ENST00000381209 UBAP1LF5GYI3 381 aa21.2■□□□□ 0.98
RPAIN-203ENST00000381209 STARD3NLO95772 234 aa21.2■□□□□ 0.98
RPAIN-203ENST00000381209 BARGINQ6ZT62 677 aa21.2■□□□□ 0.98
RPAIN-203ENST00000381209 TTLL7Q6ZT98 887 aa21.2■□□□□ 0.98
RPAIN-203ENST00000381209 NUTM2AQ8IVF1 878 aaPredicted RBP21.2■□□□□ 0.98
RPAIN-203ENST00000381209 NRAPQ86VF7 1730 aa21.2■□□□□ 0.98
RPAIN-203ENST00000381209 TBC1D2Q9BYX2 928 aa21.19■□□□□ 0.98
RPAIN-203ENST00000381209 CASP7P55210 303 aa21.19■□□□□ 0.98
RPAIN-203ENST00000381209 DDB1Q16531 1140 aa21.19■□□□□ 0.98
RPAIN-203ENST00000381209 RABL6Q3YEC7 729 aaPredicted RBP21.19■□□□□ 0.98
RPAIN-203ENST00000381209 DNAJC10Q8IXB1 793 aa21.19■□□□□ 0.98
RPAIN-203ENST00000381209 CLASRPQ8N2M8 674 aaKnown RBP21.19■□□□□ 0.98
RPAIN-203ENST00000381209 A0A087WZG4 1122 aa21.18■□□□□ 0.98
RPAIN-203ENST00000381209 ATP5J2-PTCD1G3V325 749 aa21.18■□□□□ 0.98
RPAIN-203ENST00000381209 H7C1W4 665 aa21.18■□□□□ 0.98
RPAIN-203ENST00000381209 G3BP1Q13283 466 aaKnown RBP eCLIP21.18■□□□□ 0.98
RPAIN-203ENST00000381209 NUTM1Q86Y26 1132 aa21.18■□□□□ 0.98
RPAIN-203ENST00000381209 TTC41PQ6P2S7 1318 aa21.17■□□□□ 0.98
RPAIN-203ENST00000381209 REC8O95072 547 aa21.17■□□□□ 0.98
RPAIN-203ENST00000381209 EPHA10Q5JZY3 1008 aa21.17■□□□□ 0.98
RPAIN-203ENST00000381209 TSHZ3Q63HK5 1081 aa21.17■□□□□ 0.98
RPAIN-203ENST00000381209 CCDC191Q8NCU4 936 aa21.17■□□□□ 0.98
RPAIN-203ENST00000381209 SNX21Q969T3 373 aa21.17■□□□□ 0.98
RPAIN-203ENST00000381209 RBM42Q9BTD8 480 aaKnown RBP21.17■□□□□ 0.98
RPAIN-203ENST00000381209 CWC25Q9NXE8 425 aaPredicted RBP21.17■□□□□ 0.98
RPAIN-203ENST00000381209 PA2G4Q9UQ80 394 aaKnown RBP21.17■□□□□ 0.98
RPAIN-203ENST00000381209 ERC2O15083 957 aa21.16■□□□□ 0.98
RPAIN-203ENST00000381209 UBE3BQ7Z3V4 1068 aa21.16■□□□□ 0.98
RPAIN-203ENST00000381209 PI4K2BQ8TCG2 481 aa21.16■□□□□ 0.98
RPAIN-203ENST00000381209 USP26Q9BXU7 913 aa21.16■□□□□ 0.98
RPAIN-203ENST00000381209 JCADQ9P266 1359 aa21.16■□□□□ 0.98
RPAIN-203ENST00000381209 COPRSQ9NQ92 184 aa21.15■□□□□ 0.98
RPAIN-203ENST00000381209 WNK3Q9BYP7 1800 aa21.15■□□□□ 0.98
RPAIN-203ENST00000381209 PRIM1P49642 420 aaKnown RBP21.14■□□□□ 0.98
RPAIN-203ENST00000381209 KIF2CQ99661 725 aa21.14■□□□□ 0.98
RPAIN-203ENST00000381209 NWD2Q9ULI1 1742 aa21.14■□□□□ 0.97
RPAIN-203ENST00000381209 ARFGEF2Q9Y6D5 1785 aa21.14■□□□□ 0.97
RPAIN-203ENST00000381209 TRIM6-TRIM34B2RNG4 842 aa21.14■□□□□ 0.97
RPAIN-203ENST00000381209 TRIM28Q13263 835 aaKnown RBP21.14■□□□□ 0.97
RPAIN-203ENST00000381209 UNC5CLQ8IV45 518 aa21.14■□□□□ 0.97
RPAIN-203ENST00000381209 GPATCH3Q96I76 525 aa21.14■□□□□ 0.97
RPAIN-203ENST00000381209 ISCA1Q9BUE6 129 aa21.14■□□□□ 0.97
RPAIN-203ENST00000381209 ZBTB3Q9H5J0 574 aa21.14■□□□□ 0.97
RPAIN-203ENST00000381209 GLRX3O76003 335 aaKnown RBP21.13■□□□□ 0.97
RPAIN-203ENST00000381209 SASH1O94885 1247 aa21.13■□□□□ 0.97
RPAIN-203ENST00000381209 CYP19A1P11511 503 aaPredicted RBP21.13■□□□□ 0.97
RPAIN-203ENST00000381209 RFX5P48382 616 aaPredicted RBP21.13■□□□□ 0.97
RPAIN-203ENST00000381209 KIF6Q6ZMV9 814 aa21.13■□□□□ 0.97
RPAIN-203ENST00000381209 IFIT2P09913 472 aaKnown RBP21.12■□□□□ 0.97
RPAIN-203ENST00000381209 CHMLP26374 656 aa21.12■□□□□ 0.97
RPAIN-203ENST00000381209 TCIRG1Q13488 830 aa21.12■□□□□ 0.97
RPAIN-203ENST00000381209 HSCBQ8IWL3 235 aa21.12■□□□□ 0.97
RPAIN-203ENST00000381209 RILPL2Q969X0 211 aa21.12■□□□□ 0.97
RPAIN-203ENST00000381209 SYTL4Q96C24 671 aaPredicted RBP21.12■□□□□ 0.97
RPAIN-203ENST00000381209 SLC4A9Q96Q91 983 aa21.12■□□□□ 0.97
RPAIN-203ENST00000381209 MARCH10Q8NA82 808 aaPredicted RBP21.11■□□□□ 0.97
RPAIN-203ENST00000381209 ESYT1Q9BSJ8 1104 aa21.11■□□□□ 0.97
RPAIN-203ENST00000381209 ECHDC1Q9NTX5 307 aa21.11■□□□□ 0.97
RPAIN-203ENST00000381209 CCDC9Q9Y3X0 531 aaKnown RBP21.11■□□□□ 0.97
RPAIN-203ENST00000381209 VPS72Q15906 364 aa21.1■□□□□ 0.97
RPAIN-203ENST00000381209 CNTROBQ8N137 903 aa21.1■□□□□ 0.97
RPAIN-203ENST00000381209 JARID2Q92833 1246 aaPredicted RBP21.1■□□□□ 0.97
RPAIN-203ENST00000381209 EPB41L2O43491 1005 aaKnown RBP21.09■□□□□ 0.97
RPAIN-203ENST00000381209 FOXO4P98177 505 aa21.09■□□□□ 0.97
RPAIN-203ENST00000381209 PTPN12Q05209 780 aaKnown RBP21.09■□□□□ 0.97
RPAIN-203ENST00000381209 AACSQ86V21 672 aa21.09■□□□□ 0.97
RPAIN-203ENST00000381209 NUP188Q5SRE5 1749 aa21.09■□□□□ 0.97
RPAIN-203ENST00000381209 MAP3K15Q6ZN16 1313 aa21.09■□□□□ 0.97
RPAIN-203ENST00000381209 RABEP1Q15276 862 aa21.08■□□□□ 0.96
RPAIN-203ENST00000381209 HSP90AB3PQ58FF7 597 aa21.08■□□□□ 0.96
RPAIN-203ENST00000381209 LMBR1LQ6UX01 489 aa21.08■□□□□ 0.96
RPAIN-203ENST00000381209 ITGB4P16144 1822 aa21.07■□□□□ 0.96
RPAIN-203ENST00000381209 SPATA31A6Q5VVP1 1343 aa21.07■□□□□ 0.96
RPAIN-203ENST00000381209 GIGYF2Q6Y7W6 1299 aaKnown RBP21.07■□□□□ 0.96
RPAIN-203ENST00000381209 FNBP4Q8N3X1 1017 aaPredicted RBP21.07■□□□□ 0.96
RPAIN-203ENST00000381209 EAF2Q96CJ1 260 aaPredicted RBP21.07■□□□□ 0.96
RPAIN-203ENST00000381209 NGLY1Q96IV0 654 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms