RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 EXOSC9Q06265 439 aaKnown RBP25.03■■□□□ 1.6
GTF3A-201ENST00000381140 TWISTNBQ3B726 338 aaPredicted RBP25.03■■□□□ 1.6
GTF3A-201ENST00000381140 ZBTB3Q9H5J0 574 aa25.03■■□□□ 1.6
GTF3A-201ENST00000381140 DBF4Q9UBU7 674 aaPredicted RBP25.02■■□□□ 1.6
GTF3A-201ENST00000381140 ZNF652Q9Y2D9 606 aa25.02■■□□□ 1.6
GTF3A-201ENST00000381140 POLRMTO00411 1230 aaKnown RBP25.01■■□□□ 1.59
GTF3A-201ENST00000381140 TCERG1O14776 1098 aaKnown RBP25.01■■□□□ 1.59
GTF3A-201ENST00000381140 HLFQ16534 295 aa25.01■■□□□ 1.59
GTF3A-201ENST00000381140 XAGE3Q8WTP9 111 aa25.01■■□□□ 1.59
GTF3A-201ENST00000381140 MAP3K15Q6ZN16 1313 aa25■■□□□ 1.59
GTF3A-201ENST00000381140 KIF13BQ9NQT8 1826 aa25■■□□□ 1.59
GTF3A-201ENST00000381140 HNRNPUQ00839 825 aaKnown RBP eCLIP25■■□□□ 1.59
GTF3A-201ENST00000381140 COPS6Q7L5N1 327 aa25■■□□□ 1.59
GTF3A-201ENST00000381140 LRP10Q7Z4F1 713 aa25■■□□□ 1.59
GTF3A-201ENST00000381140 NLGN2Q8NFZ4 835 aa25■■□□□ 1.59
GTF3A-201ENST00000381140 CCDC30Q5VVM6 783 aa24.99■■□□□ 1.59
GTF3A-201ENST00000381140 N4BP2Q86UW6 1770 aaPredicted RBP24.98■■□□□ 1.59
GTF3A-201ENST00000381140 SERPINB2P05120 415 aa24.98■■□□□ 1.59
GTF3A-201ENST00000381140 SETDB2Q96T68 719 aa24.98■■□□□ 1.59
GTF3A-201ENST00000381140 CLEC4GQ6UXB4 293 aa24.97■■□□□ 1.59
GTF3A-201ENST00000381140 CDCA7LQ96GN5 454 aa24.97■■□□□ 1.59
GTF3A-201ENST00000381140 HYPKQ9NX55 129 aa24.97■■□□□ 1.59
GTF3A-201ENST00000381140 CD2APQ9Y5K6 639 aa24.97■■□□□ 1.59
GTF3A-201ENST00000381140 NRXN2Q9P2S2 1712 aa24.97■■□□□ 1.59
GTF3A-201ENST00000381140 ANKRD36CQ5JPF3 1778 aa24.96■■□□□ 1.59
GTF3A-201ENST00000381140 CACNA1FO60840 1977 aa24.96■■□□□ 1.59
GTF3A-201ENST00000381140 ERVV-1B6SEH8 477 aa24.96■■□□□ 1.59
GTF3A-201ENST00000381140 E9PSI1 815 aa24.96■■□□□ 1.59
GTF3A-201ENST00000381140 NPHP1O15259 732 aa24.96■■□□□ 1.59
GTF3A-201ENST00000381140 NIP7Q9Y221 180 aaKnown RBP eCLIP24.96■■□□□ 1.59
GTF3A-201ENST00000381140 C10orf71Q711Q0 1435 aa24.96■■□□□ 1.59
GTF3A-201ENST00000381140 FAM177BA6PVY3 158 aa24.95■■□□□ 1.59
GTF3A-201ENST00000381140 STK31Q9BXU1 1019 aa24.95■■□□□ 1.59
GTF3A-201ENST00000381140 CHMP4AQ9BY43 222 aa24.95■■□□□ 1.59
GTF3A-201ENST00000381140 CARMIL3Q8ND23 1372 aa24.95■■□□□ 1.59
GTF3A-201ENST00000381140 ARFGEF2Q9Y6D5 1785 aa24.94■■□□□ 1.58
GTF3A-201ENST00000381140 GPTP24298 496 aa24.93■■□□□ 1.58
GTF3A-201ENST00000381140 SLFN5Q08AF3 891 aa24.93■■□□□ 1.58
GTF3A-201ENST00000381140 PELP1Q8IZL8 1130 aaKnown RBP24.93■■□□□ 1.58
GTF3A-201ENST00000381140 CCDC24Q8N4L8 307 aa24.93■■□□□ 1.58
GTF3A-201ENST00000381140 PHAXQ9H814 394 aaKnown RBP24.93■■□□□ 1.58
GTF3A-201ENST00000381140 VAMP4O75379 141 aa24.93■■□□□ 1.58
GTF3A-201ENST00000381140 WWC3Q9ULE0 1092 aa24.93■■□□□ 1.58
GTF3A-201ENST00000381140 KIAA1551Q9HCM1 1747 aa24.92■■□□□ 1.58
GTF3A-201ENST00000381140 GIGYF2Q6Y7W6 1299 aaKnown RBP24.92■■□□□ 1.58
GTF3A-201ENST00000381140 NBPF5PQ86XG9 351 aaPredicted RBP24.92■■□□□ 1.58
GTF3A-201ENST00000381140 ANKRD31Q8N7Z5 1873 aa24.91■■□□□ 1.58
GTF3A-201ENST00000381140 RGL2O15211 777 aa24.91■■□□□ 1.58
GTF3A-201ENST00000381140 CNBD1Q8NA66 436 aa24.91■■□□□ 1.58
GTF3A-201ENST00000381140 YTHDC1Q96MU7 727 aaKnown RBP24.91■■□□□ 1.58
GTF3A-201ENST00000381140 ATP10DQ9P241 1426 aa24.9■■□□□ 1.58
GTF3A-201ENST00000381140 SLC4A2P04920 1241 aa24.89■■□□□ 1.57
GTF3A-201ENST00000381140 PRR5LQ6MZQ0 368 aa24.89■■□□□ 1.57
GTF3A-201ENST00000381140 ANKRD13DQ6ZTN6 518 aa24.89■■□□□ 1.57
GTF3A-201ENST00000381140 PLBD2Q8NHP8 589 aa24.89■■□□□ 1.57
GTF3A-201ENST00000381140 PXDNLA1KZ92 1463 aa24.88■■□□□ 1.57
GTF3A-201ENST00000381140 A0A0G2JLW4 131 aa24.88■■□□□ 1.57
GTF3A-201ENST00000381140 DCAF8L1A6NGE4 600 aa24.88■■□□□ 1.57
GTF3A-201ENST00000381140 RIC3Q7Z5B4 369 aa24.87■■□□□ 1.57
GTF3A-201ENST00000381140 UBN2Q6ZU65 1347 aa24.87■■□□□ 1.57
GTF3A-201ENST00000381140 DPEP1P16444 411 aa24.86■■□□□ 1.57
GTF3A-201ENST00000381140 GTF2E1P29083 439 aaPredicted RBP24.86■■□□□ 1.57
GTF3A-201ENST00000381140 ST5P78524 1137 aa24.86■■□□□ 1.57
GTF3A-201ENST00000381140 HSP90AB3PQ58FF7 597 aa24.86■■□□□ 1.57
GTF3A-201ENST00000381140 G2E3Q7L622 706 aa24.86■■□□□ 1.57
GTF3A-201ENST00000381140 ZNF34Q8IZ26 560 aa24.86■■□□□ 1.57
GTF3A-201ENST00000381140 ZNF428Q96B54 188 aa24.86■■□□□ 1.57
GTF3A-201ENST00000381140 CHRNA5P30532 468 aa24.85■■□□□ 1.57
GTF3A-201ENST00000381140 TGFB2P61812 414 aa24.85■■□□□ 1.57
GTF3A-201ENST00000381140 GPR162Q16538 588 aa24.85■■□□□ 1.57
GTF3A-201ENST00000381140 TPTE2Q6XPS3 522 aa24.85■■□□□ 1.57
GTF3A-201ENST00000381140 BRCA1P38398 1863 aaKnown RBP24.85■■□□□ 1.57
GTF3A-201ENST00000381140 DDX58O95786 925 aaKnown RBP24.84■■□□□ 1.57
GTF3A-201ENST00000381140 TCIRG1Q13488 830 aa24.84■■□□□ 1.57
GTF3A-201ENST00000381140 SUSD4Q5VX71 490 aa24.83■■□□□ 1.57
GTF3A-201ENST00000381140 CACNA1SQ13698 1873 aa24.83■■□□□ 1.57
GTF3A-201ENST00000381140 DLEC1Q9Y238 1755 aa24.82■■□□□ 1.56
GTF3A-201ENST00000381140 COL11A2P13942 1736 aaPredicted RBP24.82■■□□□ 1.56
GTF3A-201ENST00000381140 ATP5J2-PTCD1G3V325 749 aa24.82■■□□□ 1.56
GTF3A-201ENST00000381140 NUTM1Q86Y26 1132 aa24.82■■□□□ 1.56
GTF3A-201ENST00000381140 TRMT2AQ8IZ69 625 aaKnown RBP24.82■■□□□ 1.56
GTF3A-201ENST00000381140 NYXQ9GZU5 481 aa24.82■■□□□ 1.56
GTF3A-201ENST00000381140 PARP10Q53GL7 1025 aa24.81■■□□□ 1.56
GTF3A-201ENST00000381140 C2CD5Q86YS7 1000 aa24.81■■□□□ 1.56
GTF3A-201ENST00000381140 FLIIQ13045 1269 aa24.8■■□□□ 1.56
GTF3A-201ENST00000381140 PPP1R42Q7Z4L9 355 aa24.8■■□□□ 1.56
GTF3A-201ENST00000381140 MYD88Q99836 296 aa24.8■■□□□ 1.56
GTF3A-201ENST00000381140 BRIP1Q9BX63 1249 aa24.8■■□□□ 1.56
GTF3A-201ENST00000381140 MAP3K2Q9Y2U5 619 aa24.8■■□□□ 1.56
GTF3A-201ENST00000381140 FKBP5Q13451 457 aaPredicted RBP24.8■■□□□ 1.56
GTF3A-201ENST00000381140 ERFEQ4G0M1 354 aa24.8■■□□□ 1.56
GTF3A-201ENST00000381140 NLRP10Q86W26 655 aa24.8■■□□□ 1.56
GTF3A-201ENST00000381140 TNRC6CQ9HCJ0 1690 aaKnown RBP24.79■■□□□ 1.56
GTF3A-201ENST00000381140 ZBED9Q6R2W3 1325 aa24.79■■□□□ 1.56
GTF3A-201ENST00000381140 PI4KAP2A4QPH2 592 aa24.79■■□□□ 1.56
GTF3A-201ENST00000381140 H0YIN7 160 aa24.79■■□□□ 1.56
GTF3A-201ENST00000381140 YBX3P16989 372 aaKnown RBP eCLIP24.79■■□□□ 1.562e-8■■□□□ 14.4
GTF3A-201ENST00000381140 PDE6BP35913 854 aa24.79■■□□□ 1.56
GTF3A-201ENST00000381140 KSR2Q6VAB6 950 aa24.79■■□□□ 1.56
GTF3A-201ENST00000381140 PI4KAP1Q8N8J0 262 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms