RNA–Protein interactions for RNA: ENST00000381029.4

VCX3B-201, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-201ENST00000381029 ELL2O00472 640 aaPredicted RBP19.19■□□□□ 0.66
VCX3B-201ENST00000381029 HLFQ16534 295 aa19.19■□□□□ 0.66
VCX3B-201ENST00000381029 MAP3K15Q6ZN16 1313 aa19.19■□□□□ 0.66
VCX3B-201ENST00000381029 PARP3Q9Y6F1 533 aa19.18■□□□□ 0.66
VCX3B-201ENST00000381029 AFDNP55196 1824 aaKnown RBP19.17■□□□□ 0.66
VCX3B-201ENST00000381029 TRMT2AQ8IZ69 625 aaKnown RBP19.17■□□□□ 0.66
VCX3B-201ENST00000381029 DBF4Q9UBU7 674 aaPredicted RBP19.17■□□□□ 0.66
VCX3B-201ENST00000381029 ATP10DQ9P241 1426 aa19.17■□□□□ 0.66
VCX3B-201ENST00000381029 XAGE3Q8WTP9 111 aa19.16■□□□□ 0.66
VCX3B-201ENST00000381029 PXDNLA1KZ92 1463 aa19.16■□□□□ 0.66
VCX3B-201ENST00000381029 GOLGB1Q14789 3259 aaKnown RBP19.15■□□□□ 0.66
VCX3B-201ENST00000381029 VAMP4O75379 141 aa19.15■□□□□ 0.66
VCX3B-201ENST00000381029 SERPINB2P05120 415 aa19.15■□□□□ 0.66
VCX3B-201ENST00000381029 EXOSC9Q06265 439 aaKnown RBP19.15■□□□□ 0.66
VCX3B-201ENST00000381029 SLFN5Q08AF3 891 aa19.15■□□□□ 0.66
VCX3B-201ENST00000381029 TWISTNBQ3B726 338 aaPredicted RBP19.15■□□□□ 0.66
VCX3B-201ENST00000381029 COPS6Q7L5N1 327 aa19.15■□□□□ 0.66
VCX3B-201ENST00000381029 NPM2Q86SE8 214 aaKnown RBP19.15■□□□□ 0.66
VCX3B-201ENST00000381029 CARMIL3Q8ND23 1372 aa19.15■□□□□ 0.66
VCX3B-201ENST00000381029 GOLGA2Q08379 1002 aa19.14■□□□□ 0.65
VCX3B-201ENST00000381029 GIGYF2Q6Y7W6 1299 aaKnown RBP19.14■□□□□ 0.65
VCX3B-201ENST00000381029 BICDL1Q6ZP65 573 aa19.14■□□□□ 0.65
VCX3B-201ENST00000381029 MYH16Q9H6N6 1097 aa19.14■□□□□ 0.65
VCX3B-201ENST00000381029 ZNF34Q8IZ26 560 aa19.13■□□□□ 0.65
VCX3B-201ENST00000381029 CDCA7LQ96GN5 454 aa19.13■□□□□ 0.65
VCX3B-201ENST00000381029 ZBTB3Q9H5J0 574 aa19.13■□□□□ 0.65
VCX3B-201ENST00000381029 HYPKQ9NX55 129 aa19.13■□□□□ 0.65
VCX3B-201ENST00000381029 ZNF652Q9Y2D9 606 aa19.13■□□□□ 0.65
VCX3B-201ENST00000381029 NUP98P52948 1817 aa19.13■□□□□ 0.65
VCX3B-201ENST00000381029 UBN2Q6ZU65 1347 aa19.12■□□□□ 0.65
VCX3B-201ENST00000381029 E9PSI1 815 aa19.12■□□□□ 0.65
VCX3B-201ENST00000381029 KCNA3P22001 575 aa19.12■□□□□ 0.65
VCX3B-201ENST00000381029 CCDC30Q5VVM6 783 aa19.12■□□□□ 0.65
VCX3B-201ENST00000381029 PRR5LQ6MZQ0 368 aa19.12■□□□□ 0.65
VCX3B-201ENST00000381029 KIF6Q6ZMV9 814 aa19.12■□□□□ 0.65
VCX3B-201ENST00000381029 PHAXQ9H814 394 aaKnown RBP19.12■□□□□ 0.65
VCX3B-201ENST00000381029 UTRNP46939 3433 aa19.11■□□□□ 0.65
VCX3B-201ENST00000381029 TGFB2P61812 414 aa19.11■□□□□ 0.65
VCX3B-201ENST00000381029 KLHL34Q8N239 644 aa19.11■□□□□ 0.65
VCX3B-201ENST00000381029 SETDB2Q96T68 719 aa19.11■□□□□ 0.65
VCX3B-201ENST00000381029 NIP7Q9Y221 180 aaKnown RBP eCLIP19.1■□□□□ 0.65
VCX3B-201ENST00000381029 AIMP1Q12904 312 aaKnown RBP19.09■□□□□ 0.65
VCX3B-201ENST00000381029 PLBD2Q8NHP8 589 aa19.09■□□□□ 0.65
VCX3B-201ENST00000381029 CHMP4AQ9BY43 222 aa19.09■□□□□ 0.65
VCX3B-201ENST00000381029 ANKRD31Q8N7Z5 1873 aa19.09■□□□□ 0.65
VCX3B-201ENST00000381029 IBTKQ9P2D0 1353 aaPredicted RBP19.08■□□□□ 0.65
VCX3B-201ENST00000381029 ANKRD13DQ6ZTN6 518 aa19.08■□□□□ 0.64
VCX3B-201ENST00000381029 G2E3Q7L622 706 aa19.08■□□□□ 0.64
VCX3B-201ENST00000381029 TCERG1O14776 1098 aaKnown RBP19.07■□□□□ 0.64
VCX3B-201ENST00000381029 DPEP1P16444 411 aa19.07■□□□□ 0.64
VCX3B-201ENST00000381029 YBX3P16989 372 aaKnown RBP eCLIP19.07■□□□□ 0.64
VCX3B-201ENST00000381029 TCIRG1Q13488 830 aa19.07■□□□□ 0.64
VCX3B-201ENST00000381029 N4BP2Q86UW6 1770 aaPredicted RBP19.06■□□□□ 0.64
VCX3B-201ENST00000381029 BRCA1P38398 1863 aaKnown RBP19.06■□□□□ 0.64
VCX3B-201ENST00000381029 A0A0G2JLW4 131 aa19.06■□□□□ 0.64
VCX3B-201ENST00000381029 KLRG2A4D1S0 409 aaPredicted RBP19.06■□□□□ 0.64
VCX3B-201ENST00000381029 NTSR2O95665 410 aa19.06■□□□□ 0.64
VCX3B-201ENST00000381029 GPTP24298 496 aa19.06■□□□□ 0.64
VCX3B-201ENST00000381029 CNBD1Q8NA66 436 aa19.06■□□□□ 0.64
VCX3B-201ENST00000381029 ISCA1Q9BUE6 129 aa19.06■□□□□ 0.64
VCX3B-201ENST00000381029 BRIP1Q9BX63 1249 aa19.06■□□□□ 0.64
VCX3B-201ENST00000381029 SUSD4Q5VX71 490 aa19.05■□□□□ 0.64
VCX3B-201ENST00000381029 NBPF5PQ86XG9 351 aaPredicted RBP19.05■□□□□ 0.64
VCX3B-201ENST00000381029 CCDC24Q8N4L8 307 aa19.05■□□□□ 0.64
VCX3B-201ENST00000381029 ANKRD36CQ5JPF3 1778 aa19.05■□□□□ 0.64
VCX3B-201ENST00000381029 ADCY9O60503 1353 aa19.05■□□□□ 0.64
VCX3B-201ENST00000381029 ARFGEF2Q9Y6D5 1785 aa19.04■□□□□ 0.64
VCX3B-201ENST00000381029 SLC4A2P04920 1241 aa19.04■□□□□ 0.64
VCX3B-201ENST00000381029 CHRNA5P30532 468 aa19.04■□□□□ 0.64
VCX3B-201ENST00000381029 RIC1Q4ADV7 1423 aa19.04■□□□□ 0.64
VCX3B-201ENST00000381029 NLRP10Q86W26 655 aa19.04■□□□□ 0.64
VCX3B-201ENST00000381029 ABCC12Q96J65 1359 aa19.04■□□□□ 0.64
VCX3B-201ENST00000381029 HNRNPUQ00839 825 aaKnown RBP eCLIP19.03■□□□□ 0.64
VCX3B-201ENST00000381029 TRIM28Q13263 835 aaKnown RBP19.03■□□□□ 0.64
VCX3B-201ENST00000381029 PARP10Q53GL7 1025 aa19.03■□□□□ 0.64
VCX3B-201ENST00000381029 HSP90AB3PQ58FF7 597 aa19.03■□□□□ 0.64
VCX3B-201ENST00000381029 TPTE2Q6XPS3 522 aa19.03■□□□□ 0.64
VCX3B-201ENST00000381029 STK31Q9BXU1 1019 aa19.03■□□□□ 0.64
VCX3B-201ENST00000381029 COL11A2P13942 1736 aaPredicted RBP19.03■□□□□ 0.64
VCX3B-201ENST00000381029 DLEC1Q9Y238 1755 aa19.02■□□□□ 0.64
VCX3B-201ENST00000381029 FLIIQ13045 1269 aa19.02■□□□□ 0.64
VCX3B-201ENST00000381029 ERFEQ4G0M1 354 aa19.01■□□□□ 0.63
VCX3B-201ENST00000381029 NUTM1Q86Y26 1132 aa19.01■□□□□ 0.63
VCX3B-201ENST00000381029 TNRC6CQ9HCJ0 1690 aaKnown RBP19.01■□□□□ 0.63
VCX3B-201ENST00000381029 CACNA1FO60840 1977 aa19.01■□□□□ 0.63
VCX3B-201ENST00000381029 ZBED9Q6R2W3 1325 aa19■□□□□ 0.63
VCX3B-201ENST00000381029 PI4KAP2A4QPH2 592 aa19■□□□□ 0.63
VCX3B-201ENST00000381029 FAM177BA6PVY3 158 aa19■□□□□ 0.63
VCX3B-201ENST00000381029 SLC10A5Q5PT55 438 aa19■□□□□ 0.63
VCX3B-201ENST00000381029 KSR2Q6VAB6 950 aa19■□□□□ 0.63
VCX3B-201ENST00000381029 PI4KAP1Q8N8J0 262 aa19■□□□□ 0.63
VCX3B-201ENST00000381029 METTL22Q9BUU2 404 aaPredicted RBP19■□□□□ 0.63
VCX3B-201ENST00000381029 NYXQ9GZU5 481 aa19■□□□□ 0.63
VCX3B-201ENST00000381029 SRGNP10124 158 aa18.99■□□□□ 0.63
VCX3B-201ENST00000381029 ST5P78524 1137 aa18.99■□□□□ 0.63
VCX3B-201ENST00000381029 RIC3Q7Z5B4 369 aa18.99■□□□□ 0.63
VCX3B-201ENST00000381029 SYNE4Q8N205 404 aa18.99■□□□□ 0.63
VCX3B-201ENST00000381029 PDZRN3Q9UPQ7 1066 aa18.99■□□□□ 0.63
VCX3B-201ENST00000381029 RNF123Q5XPI4 1314 aa18.99■□□□□ 0.63
VCX3B-201ENST00000381029 ATP5J2-PTCD1G3V325 749 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms