RNA–Protein interactions for RNA: ENST00000380962.9

LCMT1-201, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 2

Gene LCMT1, Length 1,529 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-201ENST00000380962 PRAMEF22A3QJZ6 481 aa16.25■□□□□ 0.19
LCMT1-201ENST00000380962 RIC3Q7Z5B4 369 aa16.25■□□□□ 0.19
LCMT1-201ENST00000380962 CABLES1Q8TDN4 633 aa16.25■□□□□ 0.19
LCMT1-201ENST00000380962 ERVV-2B6SEH9 535 aa16.24■□□□□ 0.19
LCMT1-201ENST00000380962 NKX1-1Q15270 411 aaPredicted RBP16.24■□□□□ 0.19
LCMT1-201ENST00000380962 CHRNA2Q15822 529 aa16.24■□□□□ 0.19
LCMT1-201ENST00000380962 TSHZ3Q63HK5 1081 aa16.24■□□□□ 0.19
LCMT1-201ENST00000380962 LRP10Q7Z4F1 713 aa16.24■□□□□ 0.19
LCMT1-201ENST00000380962 ZNF496Q96IT1 587 aaPredicted RBP16.24■□□□□ 0.19
LCMT1-201ENST00000380962 BCL11AQ9H165 835 aa16.24■□□□□ 0.19
LCMT1-201ENST00000380962 GLI3P10071 1580 aa16.24■□□□□ 0.19
LCMT1-201ENST00000380962 COL5A2P05997 1499 aaPredicted RBP16.24■□□□□ 0.19
LCMT1-201ENST00000380962 NEURL1BA8MQ27 555 aa16.24■□□□□ 0.19
LCMT1-201ENST00000380962 TRAK2O60296 914 aa16.24■□□□□ 0.19
LCMT1-201ENST00000380962 CABP4P57796 275 aa16.24■□□□□ 0.19
LCMT1-201ENST00000380962 SLC39A6Q13433 755 aa16.24■□□□□ 0.19
LCMT1-201ENST00000380962 OS9Q13438 667 aaPredicted RBP16.24■□□□□ 0.19
LCMT1-201ENST00000380962 NUTM1Q86Y26 1132 aa16.24■□□□□ 0.19
LCMT1-201ENST00000380962 SLAIN2Q9P270 581 aa16.24■□□□□ 0.19
LCMT1-201ENST00000380962 ABCA3Q99758 1704 aa16.23■□□□□ 0.19
LCMT1-201ENST00000380962 AK9Q5TCS8 1911 aa16.23■□□□□ 0.19
LCMT1-201ENST00000380962 UBAP1LF5GYI3 381 aa16.23■□□□□ 0.19
LCMT1-201ENST00000380962 IGKV5-2P06315 115 aa16.23■□□□□ 0.19
LCMT1-201ENST00000380962 GCKRQ14397 625 aa16.23■□□□□ 0.19
LCMT1-201ENST00000380962 CWF19L2Q2TBE0 894 aaKnown RBP16.23■□□□□ 0.19
LCMT1-201ENST00000380962 XAGE3Q8WTP9 111 aa16.23■□□□□ 0.19
LCMT1-201ENST00000380962 SUCLG2Q96I99 432 aa16.23■□□□□ 0.19
LCMT1-201ENST00000380962 CARD10Q9BWT7 1032 aa16.23■□□□□ 0.19
LCMT1-201ENST00000380962 PRDM11Q9NQV5 511 aa16.23■□□□□ 0.19
LCMT1-201ENST00000380962 ECHDC1Q9NTX5 307 aa16.23■□□□□ 0.19
LCMT1-201ENST00000380962 GOLGA6L22H0YM25 854 aa16.22■□□□□ 0.19
LCMT1-201ENST00000380962 SGSM2O43147 1006 aa16.22■□□□□ 0.19
LCMT1-201ENST00000380962 CYP2E1P05181 493 aaPredicted RBP16.22■□□□□ 0.19
LCMT1-201ENST00000380962 ANKRD13DQ6ZTN6 518 aa16.22■□□□□ 0.19
LCMT1-201ENST00000380962 ZCRB1Q8TBF4 217 aaKnown RBP16.22■□□□□ 0.19
LCMT1-201ENST00000380962 RUFY2Q8WXA3 655 aa16.22■□□□□ 0.19
LCMT1-201ENST00000380962 ANO2Q9NQ90 1003 aa16.22■□□□□ 0.19
LCMT1-201ENST00000380962 UBR2Q8IWV8 1755 aa16.22■□□□□ 0.19
LCMT1-201ENST00000380962 HSPA4P34932 840 aa16.21■□□□□ 0.19
LCMT1-201ENST00000380962 G3BP1Q13283 466 aaKnown RBP eCLIP16.21■□□□□ 0.19
LCMT1-201ENST00000380962 COPS6Q7L5N1 327 aa16.21■□□□□ 0.19
LCMT1-201ENST00000380962 UNC5CLQ8IV45 518 aa16.21■□□□□ 0.19
LCMT1-201ENST00000380962 KAZALD1Q96I82 304 aa16.21■□□□□ 0.19
LCMT1-201ENST00000380962 RAD50Q92878 1312 aa16.21■□□□□ 0.19
LCMT1-201ENST00000380962 PAPPAQ13219 1627 aa16.21■□□□□ 0.19
LCMT1-201ENST00000380962 NHSL1Q5SYE7 1610 aa16.21■□□□□ 0.19
LCMT1-201ENST00000380962 HIP1O00291 1037 aa16.2■□□□□ 0.18
LCMT1-201ENST00000380962 IFIT2P09913 472 aaKnown RBP16.2■□□□□ 0.18
LCMT1-201ENST00000380962 AIMP1Q12904 312 aaKnown RBP16.2■□□□□ 0.18
LCMT1-201ENST00000380962 INTS4Q96HW7 963 aaKnown RBP16.2■□□□□ 0.18
LCMT1-201ENST00000380962 BICC1Q9H694 974 aaKnown RBP16.2■□□□□ 0.18
LCMT1-201ENST00000380962 CUL4AQ13619 759 aa16.19■□□□□ 0.18
LCMT1-201ENST00000380962 PLBD2Q8NHP8 589 aa16.19■□□□□ 0.18
LCMT1-201ENST00000380962 EVI5LQ96CN4 794 aa16.19■□□□□ 0.18
LCMT1-201ENST00000380962 TNS2Q63HR2 1409 aa16.19■□□□□ 0.18
LCMT1-201ENST00000380962 FSD2A1L4K1 749 aa16.19■□□□□ 0.18
LCMT1-201ENST00000380962 NEK4P51957 841 aa16.19■□□□□ 0.18
LCMT1-201ENST00000380962 RABL6Q3YEC7 729 aaPredicted RBP16.19■□□□□ 0.18
LCMT1-201ENST00000380962 TOM1L2Q6ZVM7 507 aa16.19■□□□□ 0.18
LCMT1-201ENST00000380962 COPRSQ9NQ92 184 aa16.19■□□□□ 0.18
LCMT1-201ENST00000380962 USP16Q9Y5T5 823 aa16.19■□□□□ 0.18
LCMT1-201ENST00000380962 ZNF335Q9H4Z2 1342 aaPredicted RBP16.18■□□□□ 0.18
LCMT1-201ENST00000380962 MYL6BP14649 208 aa16.18■□□□□ 0.18
LCMT1-201ENST00000380962 IL2RBP14784 551 aa16.18■□□□□ 0.18
LCMT1-201ENST00000380962 MYD88Q99836 296 aa16.18■□□□□ 0.18
LCMT1-201ENST00000380962 ARFGEF2Q9Y6D5 1785 aa16.17■□□□□ 0.18
LCMT1-201ENST00000380962 KIAA1211Q6ZU35 1233 aa16.17■□□□□ 0.18
LCMT1-201ENST00000380962 KCPQ6ZWJ8 1503 aa16.17■□□□□ 0.18
LCMT1-201ENST00000380962 SSFA2P28290 1259 aa16.16■□□□□ 0.18
LCMT1-201ENST00000380962 LSG1Q9H089 658 aaKnown RBP16.16■□□□□ 0.18
LCMT1-201ENST00000380962 SNRKQ9NRH2 765 aa16.16■□□□□ 0.18
LCMT1-201ENST00000380962 DIAPH3Q9NSV4 1193 aa16.16■□□□□ 0.18
LCMT1-201ENST00000380962 RFX7Q2KHR2 1363 aa16.16■□□□□ 0.18
LCMT1-201ENST00000380962 SASH1O94885 1247 aa16.15■□□□□ 0.18
LCMT1-201ENST00000380962 BAG4O95429 457 aaKnown RBP16.15■□□□□ 0.18
LCMT1-201ENST00000380962 AACSQ86V21 672 aa16.15■□□□□ 0.18
LCMT1-201ENST00000380962 TICAM2Q86XR7 235 aa16.15■□□□□ 0.18
LCMT1-201ENST00000380962 KCNB2Q92953 911 aa16.15■□□□□ 0.18
LCMT1-201ENST00000380962 TMX3Q96JJ7 454 aa16.15■□□□□ 0.18
LCMT1-201ENST00000380962 PALD1Q9ULE6 856 aa16.15■□□□□ 0.18
LCMT1-201ENST00000380962 PA2G4Q9UQ80 394 aaKnown RBP16.15■□□□□ 0.18
LCMT1-201ENST00000380962 SHANK3Q9BYB0 1731 aa16.15■□□□□ 0.18
LCMT1-201ENST00000380962 GOLGA6L3A6NEY3 463 aa16.14■□□□□ 0.18
LCMT1-201ENST00000380962 FOXD4L1Q9NU39 408 aa16.14■□□□□ 0.18
LCMT1-201ENST00000380962 AFDNP55196 1824 aaKnown RBP16.14■□□□□ 0.17
LCMT1-201ENST00000380962 CASP7P55210 303 aa16.14■□□□□ 0.17
LCMT1-201ENST00000380962 RFX5P48382 616 aaPredicted RBP16.13■□□□□ 0.17
LCMT1-201ENST00000380962 EAF2Q96CJ1 260 aaPredicted RBP16.13■□□□□ 0.17
LCMT1-201ENST00000380962 TM6SF1Q9BZW5 370 aa16.13■□□□□ 0.17
LCMT1-201ENST00000380962 NUP188Q5SRE5 1749 aa16.12■□□□□ 0.17
LCMT1-201ENST00000380962 KLHL40Q2TBA0 621 aa16.12■□□□□ 0.17
LCMT1-201ENST00000380962 IL25Q9H293 177 aa16.12■□□□□ 0.17
LCMT1-201ENST00000380962 H7C1W4 665 aa16.11■□□□□ 0.17
LCMT1-201ENST00000380962 MRE11P49959 708 aa16.11■□□□□ 0.17
LCMT1-201ENST00000380962 VSIG10Q8N0Z9 540 aa16.11■□□□□ 0.17
LCMT1-201ENST00000380962 TEX13AQ9BXU3 409 aaPredicted RBP16.11■□□□□ 0.17
LCMT1-201ENST00000380962 SNX14Q9Y5W7 946 aa16.11■□□□□ 0.17
LCMT1-201ENST00000380962 MAP4K4O95819 1239 aaPredicted RBP16.1■□□□□ 0.17
LCMT1-201ENST00000380962 PTPN12Q05209 780 aaKnown RBP16.1■□□□□ 0.17
LCMT1-201ENST00000380962 EPHA10Q5JZY3 1008 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms