RNA–Protein interactions for RNA: ENST00000380743.8

SMN2-203, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-203ENST00000380743 USPL1Q5W0Q7 1092 aa16.22■□□□□ 0.19
SMN2-203ENST00000380743 SMC4Q9NTJ3 1288 aa16.22■□□□□ 0.19
SMN2-203ENST00000380743 BCAR3O75815 825 aa16.21■□□□□ 0.19
SMN2-203ENST00000380743 FLIIQ13045 1269 aa16.21■□□□□ 0.19
SMN2-203ENST00000380743 KIF6Q6ZMV9 814 aa16.21■□□□□ 0.19
SMN2-203ENST00000380743 BCL2L12Q9HB09 334 aa16.21■□□□□ 0.19
SMN2-203ENST00000380743 GYS1P13807 737 aa16.2■□□□□ 0.18
SMN2-203ENST00000380743 HLFQ16534 295 aa16.2■□□□□ 0.18
SMN2-203ENST00000380743 MAP3K15Q6ZN16 1313 aa16.2■□□□□ 0.18
SMN2-203ENST00000380743 ANKRD13DQ6ZTN6 518 aa16.2■□□□□ 0.18
SMN2-203ENST00000380743 ZBTB3Q9H5J0 574 aa16.2■□□□□ 0.18
SMN2-203ENST00000380743 CASZ1Q86V15 1759 aa16.2■□□□□ 0.18
SMN2-203ENST00000380743 FKBP8Q14318 412 aa16.19■□□□□ 0.18
SMN2-203ENST00000380743 CACNA1FO60840 1977 aa16.19■□□□□ 0.18
SMN2-203ENST00000380743 ERVV-1B6SEH8 477 aa16.19■□□□□ 0.18
SMN2-203ENST00000380743 ZBTB7AO95365 584 aa16.19■□□□□ 0.18
SMN2-203ENST00000380743 BRPF1P55201 1214 aaPredicted RBP16.19■□□□□ 0.18
SMN2-203ENST00000380743 FKBP5Q13451 457 aaPredicted RBP16.18■□□□□ 0.18
SMN2-203ENST00000380743 MSL1Q68DK7 614 aa16.18■□□□□ 0.18
SMN2-203ENST00000380743 PLBD2Q8NHP8 589 aa16.18■□□□□ 0.18
SMN2-203ENST00000380743 SLC16A10Q8TF71 515 aa16.18■□□□□ 0.18
SMN2-203ENST00000380743 RCAN3Q9UKA8 241 aa16.18■□□□□ 0.18
SMN2-203ENST00000380743 PI4KAP2A4QPH2 592 aa16.17■□□□□ 0.18
SMN2-203ENST00000380743 DDX58O95786 925 aaKnown RBP16.17■□□□□ 0.18
SMN2-203ENST00000380743 CLEC4GQ6UXB4 293 aa16.17■□□□□ 0.18
SMN2-203ENST00000380743 PI4KAP1Q8N8J0 262 aa16.17■□□□□ 0.18
SMN2-203ENST00000380743 NOB1Q9ULX3 412 aaKnown RBP16.17■□□□□ 0.18
SMN2-203ENST00000380743 BCORQ6W2J9 1755 aa16.17■□□□□ 0.18
SMN2-203ENST00000380743 SCN7AQ01118 1682 aa16.16■□□□□ 0.18
SMN2-203ENST00000380743 ADCY9O60503 1353 aa16.16■□□□□ 0.18
SMN2-203ENST00000380743 KSR2Q6VAB6 950 aa16.16■□□□□ 0.18
SMN2-203ENST00000380743 GIGYF2Q6Y7W6 1299 aaKnown RBP16.16■□□□□ 0.18
SMN2-203ENST00000380743 RIC3Q7Z5B4 369 aa16.16■□□□□ 0.18
SMN2-203ENST00000380743 MAP3K2Q9Y2U5 619 aa16.16■□□□□ 0.18
SMN2-203ENST00000380743 GOLGB1Q14789 3259 aaKnown RBP16.15■□□□□ 0.18
SMN2-203ENST00000380743 TBC1D9BQ66K14 1250 aa16.15■□□□□ 0.18
SMN2-203ENST00000380743 NLGN1Q8N2Q7 840 aa16.15■□□□□ 0.18
SMN2-203ENST00000380743 MTFR1LQ9H019 292 aa16.15■□□□□ 0.18
SMN2-203ENST00000380743 ATF5Q9Y2D1 282 aaPredicted RBP16.15■□□□□ 0.18
SMN2-203ENST00000380743 ZNF652Q9Y2D9 606 aa16.15■□□□□ 0.18
SMN2-203ENST00000380743 PTPRCP08575 1304 aa16.15■□□□□ 0.18
SMN2-203ENST00000380743 F6X3S4 739 aa16.14■□□□□ 0.18
SMN2-203ENST00000380743 RGL2O15211 777 aa16.14■□□□□ 0.18
SMN2-203ENST00000380743 NUP98P52948 1817 aa16.14■□□□□ 0.17
SMN2-203ENST00000380743 TM4SF1P30408 202 aa16.14■□□□□ 0.17
SMN2-203ENST00000380743 NFIXQ14938 502 aa16.14■□□□□ 0.17
SMN2-203ENST00000380743 BICDL1Q6ZP65 573 aa16.14■□□□□ 0.17
SMN2-203ENST00000380743 FRAT1Q92837 279 aaPredicted RBP16.14■□□□□ 0.17
SMN2-203ENST00000380743 KIF16BQ96L93 1317 aa16.13■□□□□ 0.17
SMN2-203ENST00000380743 TCIRG1Q13488 830 aa16.13■□□□□ 0.17
SMN2-203ENST00000380743 ZNF34Q8IZ26 560 aa16.13■□□□□ 0.17
SMN2-203ENST00000380743 METTL22Q9BUU2 404 aaPredicted RBP16.13■□□□□ 0.17
SMN2-203ENST00000380743 ARFGEF2Q9Y6D5 1785 aa16.12■□□□□ 0.17
SMN2-203ENST00000380743 ATP5J2-PTCD1G3V325 749 aa16.12■□□□□ 0.17
SMN2-203ENST00000380743 MMP10P09238 476 aa16.12■□□□□ 0.17
SMN2-203ENST00000380743 GPTP24298 496 aa16.12■□□□□ 0.17
SMN2-203ENST00000380743 DDR1Q08345 913 aa16.12■□□□□ 0.17
SMN2-203ENST00000380743 DNAAF4Q8WXU2 420 aa16.12■□□□□ 0.17
SMN2-203ENST00000380743 ARHGAP45Q92619 1136 aa16.12■□□□□ 0.17
SMN2-203ENST00000380743 MYD88Q99836 296 aa16.12■□□□□ 0.17
SMN2-203ENST00000380743 NIP7Q9Y221 180 aaKnown RBP eCLIP16.12■□□□□ 0.17
SMN2-203ENST00000380743 UBN2Q6ZU65 1347 aa16.11■□□□□ 0.17
SMN2-203ENST00000380743 ATP10DQ9P241 1426 aa16.11■□□□□ 0.17
SMN2-203ENST00000380743 HSP90AB3PQ58FF7 597 aa16.11■□□□□ 0.17
SMN2-203ENST00000380743 SETDB2Q96T68 719 aa16.11■□□□□ 0.17
SMN2-203ENST00000380743 POLRMTO00411 1230 aaKnown RBP16.1■□□□□ 0.17
SMN2-203ENST00000380743 IPO8O15397 1037 aaKnown RBP16.1■□□□□ 0.17
SMN2-203ENST00000380743 IGKV5-2P06315 115 aa16.1■□□□□ 0.17
SMN2-203ENST00000380743 TRIM27P14373 513 aa16.1■□□□□ 0.17
SMN2-203ENST00000380743 PTGER2P43116 358 aa16.1■□□□□ 0.17
SMN2-203ENST00000380743 SGIP1Q9BQI5 828 aa16.1■□□□□ 0.17
SMN2-203ENST00000380743 ISCA1Q9BUE6 129 aa16.1■□□□□ 0.17
SMN2-203ENST00000380743 TNNQ9UQP3 1299 aa16.1■□□□□ 0.17
SMN2-203ENST00000380743 PLIN1O60240 522 aa16.09■□□□□ 0.17
SMN2-203ENST00000380743 ZKSCAN2Q63HK3 967 aa16.09■□□□□ 0.17
SMN2-203ENST00000380743 SLC4A10Q6U841 1118 aa16.09■□□□□ 0.17
SMN2-203ENST00000380743 ATF7IPQ6VMQ6 1270 aa16.09■□□□□ 0.17
SMN2-203ENST00000380743 NLRP10Q86W26 655 aa16.09■□□□□ 0.17
SMN2-203ENST00000380743 API5Q9BZZ5 524 aaKnown RBP16.09■□□□□ 0.17
SMN2-203ENST00000380743 SPON1Q9HCB6 807 aa16.09■□□□□ 0.17
SMN2-203ENST00000380743 COL24A1Q17RW2 1714 aa16.09■□□□□ 0.17
SMN2-203ENST00000380743 NEXNQ0ZGT2 675 aa16.09■□□□□ 0.17
SMN2-203ENST00000380743 TRIM28Q13263 835 aaKnown RBP16.09■□□□□ 0.17
SMN2-203ENST00000380743 CWF19L2Q2TBE0 894 aaKnown RBP16.09■□□□□ 0.17
SMN2-203ENST00000380743 BEND3Q5T5X7 828 aa16.09■□□□□ 0.17
SMN2-203ENST00000380743 CARMIL3Q8ND23 1372 aa16.08■□□□□ 0.16
SMN2-203ENST00000380743 FAM177BA6PVY3 158 aa16.08■□□□□ 0.16
SMN2-203ENST00000380743 SERPINB2P05120 415 aa16.08■□□□□ 0.16
SMN2-203ENST00000380743 POLD1P28340 1107 aa16.08■□□□□ 0.16
SMN2-203ENST00000380743 SUSD4Q5VX71 490 aa16.08■□□□□ 0.16
SMN2-203ENST00000380743 PARP3Q9Y6F1 533 aa16.08■□□□□ 0.16
SMN2-203ENST00000380743 ANKRD36CQ5JPF3 1778 aa16.08■□□□□ 0.16
SMN2-203ENST00000380743 NEURL1BA8MQ27 555 aa16.07■□□□□ 0.16
SMN2-203ENST00000380743 PARP10Q53GL7 1025 aa16.07■□□□□ 0.16
SMN2-203ENST00000380743 LINS1Q8NG48 757 aa16.07■□□□□ 0.16
SMN2-203ENST00000380743 CLUAP1Q96AJ1 413 aa16.07■□□□□ 0.16
SMN2-203ENST00000380743 NBPF5PQ86XG9 351 aaPredicted RBP16.06■□□□□ 0.16
SMN2-203ENST00000380743 CCDC191Q8NCU4 936 aa16.06■□□□□ 0.16
SMN2-203ENST00000380743 ABCC4O15439 1325 aa16.06■□□□□ 0.16
SMN2-203ENST00000380743 NTSR2O95665 410 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms