RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 TSPYL4Q9UJ04 414 aa9.76□□□□□ -0.85
CDKL5-202ENST00000379996 CABP4P57796 275 aa9.75□□□□□ -0.85
CDKL5-202ENST00000379996 NFKBIBQ15653 356 aa9.75□□□□□ -0.85
CDKL5-202ENST00000379996 ZNF790Q6PG37 636 aa9.75□□□□□ -0.85
CDKL5-202ENST00000379996 AKT1S1Q96B36 256 aa9.75□□□□□ -0.85
CDKL5-202ENST00000379996 CCDC9Q9Y3X0 531 aaKnown RBP9.75□□□□□ -0.85
CDKL5-202ENST00000379996 QSER1Q2KHR3 1735 aa9.75□□□□□ -0.85
CDKL5-202ENST00000379996 ERBB4Q15303 1308 aa9.75□□□□□ -0.85
CDKL5-202ENST00000379996 VAMP4O75379 141 aa9.75□□□□□ -0.85
CDKL5-202ENST00000379996 RXRBP28702 533 aa9.75□□□□□ -0.85
CDKL5-202ENST00000379996 HDAC1Q13547 482 aaPredicted RBP9.75□□□□□ -0.85
CDKL5-202ENST00000379996 TRPC6Q9Y210 931 aa9.75□□□□□ -0.85
CDKL5-202ENST00000379996 NUP188Q5SRE5 1749 aa9.75□□□□□ -0.85
CDKL5-202ENST00000379996 PXDNLA1KZ92 1463 aa9.74□□□□□ -0.85
CDKL5-202ENST00000379996 PRKAR2AP13861 404 aaKnown RBP9.74□□□□□ -0.85
CDKL5-202ENST00000379996 TRIM27P14373 513 aa9.74□□□□□ -0.85
CDKL5-202ENST00000379996 EXOSC9Q06265 439 aaKnown RBP9.74□□□□□ -0.85
CDKL5-202ENST00000379996 ILDR1Q86SU0 546 aaPredicted RBP9.74□□□□□ -0.85
CDKL5-202ENST00000379996 NFATC2IPQ8NCF5 419 aa9.74□□□□□ -0.85
CDKL5-202ENST00000379996 TSR2Q969E8 191 aaKnown RBP9.74□□□□□ -0.85
CDKL5-202ENST00000379996 TBC1D32Q96NH3 1257 aa9.74□□□□□ -0.85
CDKL5-202ENST00000379996 FARP1Q9Y4F1 1045 aaPredicted RBP9.74□□□□□ -0.85
CDKL5-202ENST00000379996 SLC4A3P48751 1232 aa9.73□□□□□ -0.85
CDKL5-202ENST00000379996 RGS3P49796 1198 aa9.73□□□□□ -0.85
CDKL5-202ENST00000379996 DDX54Q8TDD1 881 aaKnown RBP9.73□□□□□ -0.85
CDKL5-202ENST00000379996 TMOD3Q9NYL9 352 aa9.73□□□□□ -0.85
CDKL5-202ENST00000379996 PIGBQ92521 554 aa9.73□□□□□ -0.85
CDKL5-202ENST00000379996 PDZRN3Q9UPQ7 1066 aa9.73□□□□□ -0.85
CDKL5-202ENST00000379996 BCORQ6W2J9 1755 aa9.73□□□□□ -0.85
CDKL5-202ENST00000379996 HMGB2P26583 209 aaKnown RBP9.73□□□□□ -0.85
CDKL5-202ENST00000379996 FAM196AQ6ZSG2 479 aa9.73□□□□□ -0.85
CDKL5-202ENST00000379996 KRT27Q7Z3Y8 459 aa9.73□□□□□ -0.85
CDKL5-202ENST00000379996 ARHGAP45Q92619 1136 aa9.73□□□□□ -0.85
CDKL5-202ENST00000379996 GIGYF1O75420 1035 aaPredicted RBP9.72□□□□□ -0.85
CDKL5-202ENST00000379996 TWISTNBQ3B726 338 aaPredicted RBP9.72□□□□□ -0.85
CDKL5-202ENST00000379996 C8orf58Q8NAV2 365 aa9.72□□□□□ -0.85
CDKL5-202ENST00000379996 SSH1Q8WYL5 1049 aa9.72□□□□□ -0.85
CDKL5-202ENST00000379996 SMARCC1Q92922 1105 aaPredicted RBP9.72□□□□□ -0.85
CDKL5-202ENST00000379996 FMNL2Q96PY5 1086 aa9.72□□□□□ -0.85
CDKL5-202ENST00000379996 POTEAQ6S8J7 498 aa9.72□□□□□ -0.85
CDKL5-202ENST00000379996 SMC5Q8IY18 1101 aa9.72□□□□□ -0.85
CDKL5-202ENST00000379996 ATG3Q9NT62 314 aa9.72□□□□□ -0.85
CDKL5-202ENST00000379996 TEX13AQ9BXU3 409 aaPredicted RBP9.72□□□□□ -0.85
CDKL5-202ENST00000379996 ZBTB40Q9NUA8 1239 aa9.72□□□□□ -0.85
CDKL5-202ENST00000379996 ZKSCAN2Q63HK3 967 aa9.71□□□□□ -0.86
CDKL5-202ENST00000379996 BCL2L13Q9BXK5 485 aa9.71□□□□□ -0.86
CDKL5-202ENST00000379996 KIF16BQ96L93 1317 aa9.71□□□□□ -0.86
CDKL5-202ENST00000379996 TESPA1A2RU30 521 aaPredicted RBP9.7□□□□□ -0.86
CDKL5-202ENST00000379996 DPYSL4O14531 572 aa9.7□□□□□ -0.86
CDKL5-202ENST00000379996 SNRPA1P09661 255 aaKnown RBP9.7□□□□□ -0.86
CDKL5-202ENST00000379996 CHRM1P11229 460 aaPredicted RBP9.7□□□□□ -0.86
CDKL5-202ENST00000379996 PHF12Q96QT6 1004 aa9.7□□□□□ -0.86
CDKL5-202ENST00000379996 ARFGEF2Q9Y6D5 1785 aa9.7□□□□□ -0.86
CDKL5-202ENST00000379996 DZIP1LQ8IYY4 767 aaKnown RBP9.7□□□□□ -0.86
CDKL5-202ENST00000379996 TTC5Q8N0Z6 440 aa9.7□□□□□ -0.86
CDKL5-202ENST00000379996 MRPL50Q8N5N7 158 aaKnown RBP9.7□□□□□ -0.86
CDKL5-202ENST00000379996 TSPYL6Q8N831 410 aa9.7□□□□□ -0.86
CDKL5-202ENST00000379996 PTPRCP08575 1304 aa9.7□□□□□ -0.86
CDKL5-202ENST00000379996 SCN7AQ01118 1682 aa9.7□□□□□ -0.86
CDKL5-202ENST00000379996 ANKRD36CQ5JPF3 1778 aa9.7□□□□□ -0.86
CDKL5-202ENST00000379996 RTL5Q5HYW3 569 aaPredicted RBP9.7□□□□□ -0.86
CDKL5-202ENST00000379996 ATF7IPQ6VMQ6 1270 aa9.7□□□□□ -0.86
CDKL5-202ENST00000379996 FRAT1Q92837 279 aaPredicted RBP9.7□□□□□ -0.86
CDKL5-202ENST00000379996 RBM42Q9BTD8 480 aaKnown RBP9.7□□□□□ -0.86
CDKL5-202ENST00000379996 C4BP0C0L5 1744 aa9.7□□□□□ -0.86
CDKL5-202ENST00000379996 DDIT3P35638 169 aa9.69□□□□□ -0.86
CDKL5-202ENST00000379996 PRIM1P49642 420 aaKnown RBP9.69□□□□□ -0.86
CDKL5-202ENST00000379996 CCDC30Q5VVM6 783 aa9.69□□□□□ -0.86
CDKL5-202ENST00000379996 FBXO22Q8NEZ5 403 aa9.69□□□□□ -0.86
CDKL5-202ENST00000379996 MS4A4AQ96JQ5 239 aa9.69□□□□□ -0.86
CDKL5-202ENST00000379996 PALLDQ8WX93 1383 aa9.69□□□□□ -0.86
CDKL5-202ENST00000379996 KCNQ3O43525 872 aa9.69□□□□□ -0.86
CDKL5-202ENST00000379996 LRP10Q7Z4F1 713 aa9.69□□□□□ -0.86
CDKL5-202ENST00000379996 ARHGEF1Q92888 912 aaKnown RBP9.69□□□□□ -0.86
CDKL5-202ENST00000379996 ZNF496Q96IT1 587 aaPredicted RBP9.69□□□□□ -0.86
CDKL5-202ENST00000379996 ABCC4O15439 1325 aa9.68□□□□□ -0.86
CDKL5-202ENST00000379996 MIS18AQ9NYP9 233 aa9.68□□□□□ -0.86
CDKL5-202ENST00000379996 ATP10DQ9P241 1426 aa9.68□□□□□ -0.86
CDKL5-202ENST00000379996 RWDD1Q9H446 243 aaPredicted RBP9.68□□□□□ -0.86
CDKL5-202ENST00000379996 NOB1Q9ULX3 412 aaKnown RBP9.68□□□□□ -0.86
CDKL5-202ENST00000379996 UBR3Q6ZT12 1888 aa9.67□□□□□ -0.86
CDKL5-202ENST00000379996 PDIA6Q15084 440 aa9.67□□□□□ -0.86
CDKL5-202ENST00000379996 GPIHBP1Q8IV16 184 aa9.67□□□□□ -0.86
CDKL5-202ENST00000379996 TMEM57Q8N5G2 664 aa9.67□□□□□ -0.86
CDKL5-202ENST00000379996 DDX27Q96GQ7 796 aaKnown RBP9.67□□□□□ -0.86
CDKL5-202ENST00000379996 CNTNAP4Q9C0A0 1308 aa9.67□□□□□ -0.86
CDKL5-202ENST00000379996 PLSCR1O15162 318 aa9.67□□□□□ -0.86
CDKL5-202ENST00000379996 FRAT2O75474 233 aaPredicted RBP9.67□□□□□ -0.86
CDKL5-202ENST00000379996 DBF4Q9UBU7 674 aaPredicted RBP9.67□□□□□ -0.86
CDKL5-202ENST00000379996 ASAP1Q9ULH1 1129 aa9.67□□□□□ -0.86
CDKL5-202ENST00000379996 C4AP0C0L4 1744 aa9.67□□□□□ -0.86
CDKL5-202ENST00000379996 SLC27A3Q5K4L6 730 aa9.66□□□□□ -0.86
CDKL5-202ENST00000379996 FAM117AQ9C073 453 aa9.66□□□□□ -0.86
CDKL5-202ENST00000379996 DDX21Q9NR30 783 aaKnown RBP eCLIP9.66□□□□□ -0.86
CDKL5-202ENST00000379996 HYPKQ9NX55 129 aa9.66□□□□□ -0.86
CDKL5-202ENST00000379996 DDX19BQ9UMR2 479 aa9.66□□□□□ -0.86
CDKL5-202ENST00000379996 GRXCR2A6NFK2 248 aa9.66□□□□□ -0.86
CDKL5-202ENST00000379996 NUCB1Q02818 461 aa9.66□□□□□ -0.86
CDKL5-202ENST00000379996 SLC39A6Q13433 755 aa9.66□□□□□ -0.86
CDKL5-202ENST00000379996 RC3H1Q5TC82 1133 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms