RNA–Protein interactions for RNA: ENST00000379056.5

TPT1-203, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 1 (best) BASIC

Gene TPT1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-203ENST00000379056 CNKSR1Q969H4 720 aa16.09■□□□□ 0.17
TPT1-203ENST00000379056 RRAGCQ9HB90 399 aa16.09■□□□□ 0.17
TPT1-203ENST00000379056 ZNF219Q9P2Y4 722 aaPredicted RBP16.09■□□□□ 0.17
TPT1-203ENST00000379056 NIP7Q9Y221 180 aaKnown RBP eCLIP16.08■□□□□ 0.16
TPT1-203ENST00000379056 RRP7AQ9Y3A4 280 aaKnown RBP16.08■□□□□ 0.16
TPT1-203ENST00000379056 NBPF26B4DH59 902 aa16.07■□□□□ 0.16
TPT1-203ENST00000379056 C21orf2O43822 256 aa16.07■□□□□ 0.16
TPT1-203ENST00000379056 RIPK4P57078 832 aa16.07■□□□□ 0.16
TPT1-203ENST00000379056 RASSF7Q02833 373 aa16.07■□□□□ 0.16
TPT1-203ENST00000379056 DPY19L2Q6NUT2 758 aa16.07■□□□□ 0.16
TPT1-203ENST00000379056 NBPF10Q6P3W6 841 aaKnown RBP16.07■□□□□ 0.16
TPT1-203ENST00000379056 NBPF15Q8N660 670 aa16.07■□□□□ 0.16
TPT1-203ENST00000379056 SBF1O95248 1867 aa16.07■□□□□ 0.16
TPT1-203ENST00000379056 FAM177BA6PVY3 158 aa16.06■□□□□ 0.16
TPT1-203ENST00000379056 RGL2O15211 777 aa16.06■□□□□ 0.16
TPT1-203ENST00000379056 STYK1Q6J9G0 422 aa16.06■□□□□ 0.16
TPT1-203ENST00000379056 MASTLQ96GX5 879 aa16.06■□□□□ 0.16
TPT1-203ENST00000379056 THUMPD2Q9BTF0 503 aaKnown RBP16.06■□□□□ 0.16
TPT1-203ENST00000379056 NRXN2Q9P2S2 1712 aa16.05■□□□□ 0.16
TPT1-203ENST00000379056 APLP1P51693 650 aa16.05■□□□□ 0.16
TPT1-203ENST00000379056 EIF4A1P60842 406 aaKnown RBP16.05■□□□□ 0.16
TPT1-203ENST00000379056 ZC3H4Q9UPT8 1303 aaKnown RBP16.04■□□□□ 0.16
TPT1-203ENST00000379056 SRGNP10124 158 aa16.04■□□□□ 0.16
TPT1-203ENST00000379056 LMOD3Q0VAK6 560 aa16.04■□□□□ 0.16
TPT1-203ENST00000379056 SOGA3Q5TF21 947 aa16.04■□□□□ 0.16
TPT1-203ENST00000379056 KIF6Q6ZMV9 814 aa16.04■□□□□ 0.16
TPT1-203ENST00000379056 RBM46Q8TBY0 533 aaKnown RBP16.04■□□□□ 0.16
TPT1-203ENST00000379056 TSPYL4Q9UJ04 414 aa16.04■□□□□ 0.16
TPT1-203ENST00000379056 DLG5Q8TDM6 1919 aa16.04■□□□□ 0.16
TPT1-203ENST00000379056 CCDC88AQ3V6T2 1871 aa16.03■□□□□ 0.16
TPT1-203ENST00000379056 GLTPD2A6NH11 291 aa16.03■□□□□ 0.16
TPT1-203ENST00000379056 SLC4A2P04920 1241 aa16.03■□□□□ 0.16
TPT1-203ENST00000379056 MYL6BP14649 208 aa16.03■□□□□ 0.16
TPT1-203ENST00000379056 VEGFAP15692 232 aaPredicted RBP16.03■□□□□ 0.16
TPT1-203ENST00000379056 WDR43Q15061 677 aaKnown RBP eCLIP16.03■□□□□ 0.16
TPT1-203ENST00000379056 HLFQ16534 295 aa16.03■□□□□ 0.16
TPT1-203ENST00000379056 ERVV-1B6SEH8 477 aa16.02■□□□□ 0.16
TPT1-203ENST00000379056 NPR1P16066 1061 aa16.02■□□□□ 0.16
TPT1-203ENST00000379056 TMPOP42166 694 aaKnown RBP16.02■□□□□ 0.16
TPT1-203ENST00000379056 FSTL1Q12841 308 aa16.02■□□□□ 0.16
TPT1-203ENST00000379056 NEUROD2Q15784 382 aa16.02■□□□□ 0.16
TPT1-203ENST00000379056 ERFEQ4G0M1 354 aa16.02■□□□□ 0.16
TPT1-203ENST00000379056 NYXQ9GZU5 481 aa16.02■□□□□ 0.16
TPT1-203ENST00000379056 MYBBP1AQ9BQG0 1328 aaKnown RBP16.01■□□□□ 0.15
TPT1-203ENST00000379056 NFKBIEO00221 500 aa16.01■□□□□ 0.15
TPT1-203ENST00000379056 EIF2S2P20042 333 aaKnown RBP16.01■□□□□ 0.15
TPT1-203ENST00000379056 ALDH1B1P30837 517 aa16.01■□□□□ 0.15
TPT1-203ENST00000379056 PRPF40BQ6NWY9 871 aaKnown RBP16.01■□□□□ 0.15
TPT1-203ENST00000379056 TAOK3Q9H2K8 898 aa16.01■□□□□ 0.15
TPT1-203ENST00000379056 BABAM1Q9NWV8 329 aa16.01■□□□□ 0.15
TPT1-203ENST00000379056 MAP3K15Q6ZN16 1313 aa15.99■□□□□ 0.15
TPT1-203ENST00000379056 TTLL7Q6ZT98 887 aa15.99■□□□□ 0.15
TPT1-203ENST00000379056 ANKRD31Q8N7Z5 1873 aa15.99■□□□□ 0.15
TPT1-203ENST00000379056 ZBTB22O15209 634 aa15.98■□□□□ 0.15
TPT1-203ENST00000379056 PRELPP51888 382 aa15.98■□□□□ 0.15
TPT1-203ENST00000379056 CCDC93Q567U6 631 aa15.98■□□□□ 0.15
TPT1-203ENST00000379056 CCDC146Q8IYE0 955 aa15.98■□□□□ 0.15
TPT1-203ENST00000379056 SMC1BQ8NDV3 1235 aa15.98■□□□□ 0.15
TPT1-203ENST00000379056 RUNDC1Q96C34 613 aa15.98■□□□□ 0.15
TPT1-203ENST00000379056 ZBTB3Q9H5J0 574 aa15.98■□□□□ 0.15
TPT1-203ENST00000379056 LAS1LQ9Y4W2 734 aaKnown RBP15.98■□□□□ 0.15
TPT1-203ENST00000379056 SCN7AQ01118 1682 aa15.98■□□□□ 0.15
TPT1-203ENST00000379056 DLEC1Q9Y238 1755 aa15.98■□□□□ 0.15
TPT1-203ENST00000379056 ERBB4Q15303 1308 aa15.97■□□□□ 0.15
TPT1-203ENST00000379056 KLRG2A4D1S0 409 aaPredicted RBP15.97■□□□□ 0.15
TPT1-203ENST00000379056 GPTP24298 496 aa15.97■□□□□ 0.15
TPT1-203ENST00000379056 LTBP3Q9NS15 1303 aa15.96■□□□□ 0.15
TPT1-203ENST00000379056 SLX4Q8IY92 1834 aa15.96■□□□□ 0.15
TPT1-203ENST00000379056 CEP350Q5VT06 3117 aa15.96■□□□□ 0.15
TPT1-203ENST00000379056 PPP1R42Q7Z4L9 355 aa15.96■□□□□ 0.15
TPT1-203ENST00000379056 RTKN2Q8IZC4 609 aa15.96■□□□□ 0.15
TPT1-203ENST00000379056 RPGRQ92834 1020 aaKnown RBP15.96■□□□□ 0.15
TPT1-203ENST00000379056 GIGYF2Q6Y7W6 1299 aaKnown RBP15.95■□□□□ 0.14
TPT1-203ENST00000379056 NUTM1Q86Y26 1132 aa15.95■□□□□ 0.14
TPT1-203ENST00000379056 C7orf43Q8WVR3 580 aa15.95■□□□□ 0.14
TPT1-203ENST00000379056 TMX4Q9H1E5 349 aaPredicted RBP15.95■□□□□ 0.14
TPT1-203ENST00000379056 ADAMTS8Q9UP79 889 aa15.95■□□□□ 0.14
TPT1-203ENST00000379056 PARP10Q53GL7 1025 aa15.94■□□□□ 0.14
TPT1-203ENST00000379056 NECTIN2Q92692 538 aa15.94■□□□□ 0.14
TPT1-203ENST00000379056 BCORQ6W2J9 1755 aa15.94■□□□□ 0.14
TPT1-203ENST00000379056 NUP98P52948 1817 aa15.94■□□□□ 0.14
TPT1-203ENST00000379056 FKBP4Q02790 459 aaKnown RBP eCLIP15.93■□□□□ 0.14
TPT1-203ENST00000379056 AIMP1Q12904 312 aaKnown RBP15.93■□□□□ 0.14
TPT1-203ENST00000379056 SUSD4Q5VX71 490 aa15.93■□□□□ 0.14
TPT1-203ENST00000379056 CC2D2BQ6DHV5 1058 aa15.93■□□□□ 0.14
TPT1-203ENST00000379056 ZNF34Q8IZ26 560 aa15.93■□□□□ 0.14
TPT1-203ENST00000379056 NLRP3Q96P20 1036 aa15.93■□□□□ 0.14
TPT1-203ENST00000379056 CACNA1SQ13698 1873 aa15.93■□□□□ 0.14
TPT1-203ENST00000379056 FER1L6Q2WGJ9 1857 aa15.93■□□□□ 0.14
TPT1-203ENST00000379056 CHL1O00533 1208 aa15.92■□□□□ 0.14
TPT1-203ENST00000379056 DDNO94850 711 aaPredicted RBP15.92■□□□□ 0.14
TPT1-203ENST00000379056 HSP90AB3PQ58FF7 597 aa15.92■□□□□ 0.14
TPT1-203ENST00000379056 DNAJC5GQ8N7S2 189 aa15.92■□□□□ 0.14
TPT1-203ENST00000379056 RBM17Q96I25 401 aaKnown RBP15.92■□□□□ 0.14
TPT1-203ENST00000379056 KDM3BQ7LBC6 1761 aa15.92■□□□□ 0.14
TPT1-203ENST00000379056 DICER1Q9UPY3 1922 aaKnown RBP15.92■□□□□ 0.14
TPT1-203ENST00000379056 ANXA1P04083 346 aa15.91■□□□□ 0.14
TPT1-203ENST00000379056 PDIA6Q15084 440 aa15.91■□□□□ 0.14
TPT1-203ENST00000379056 COPS6Q7L5N1 327 aa15.91■□□□□ 0.14
TPT1-203ENST00000379056 SYNE4Q8N205 404 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms