RNA–Protein interactions for RNA: ENST00000379013.6

UPK1A-202, Transcript of uroplakin 1A, humanhuman

TSL 1 (best) BASIC

Gene UPK1A, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-202ENST00000379013 NBPF15Q8N660 670 aa17.83■□□□□ 0.44
UPK1A-202ENST00000379013 KIF13BQ9NQT8 1826 aa17.82■□□□□ 0.44
UPK1A-202ENST00000379013 N4BP2Q86UW6 1770 aaPredicted RBP17.82■□□□□ 0.44
UPK1A-202ENST00000379013 SNRPA1P09661 255 aaKnown RBP17.82■□□□□ 0.44
UPK1A-202ENST00000379013 EIF4A1P60842 406 aaKnown RBP17.82■□□□□ 0.44
UPK1A-202ENST00000379013 TBC1D9BQ66K14 1250 aa17.82■□□□□ 0.44
UPK1A-202ENST00000379013 SPINK5Q9NQ38 1064 aaPredicted RBP17.82■□□□□ 0.44
UPK1A-202ENST00000379013 CEP350Q5VT06 3117 aa17.81■□□□□ 0.44
UPK1A-202ENST00000379013 TWISTNBQ3B726 338 aaPredicted RBP17.81■□□□□ 0.44
UPK1A-202ENST00000379013 BICDL1Q6ZP65 573 aa17.81■□□□□ 0.44
UPK1A-202ENST00000379013 BCS1LQ9Y276 419 aa17.81■□□□□ 0.44
UPK1A-202ENST00000379013 CAMTA2O94983 1202 aa17.8■□□□□ 0.44
UPK1A-202ENST00000379013 SERPINB2P05120 415 aa17.8■□□□□ 0.44
UPK1A-202ENST00000379013 IL6STP40189 918 aaPredicted RBP17.8■□□□□ 0.44
UPK1A-202ENST00000379013 EXOSC9Q06265 439 aaKnown RBP17.8■□□□□ 0.44
UPK1A-202ENST00000379013 CCDC24Q8N4L8 307 aa17.8■□□□□ 0.44
UPK1A-202ENST00000379013 ZNF330Q9Y3S2 320 aaPredicted RBP17.8■□□□□ 0.44
UPK1A-202ENST00000379013 GIGYF1O75420 1035 aaPredicted RBP17.78■□□□□ 0.44
UPK1A-202ENST00000379013 CCDC30Q5VVM6 783 aa17.78■□□□□ 0.44
UPK1A-202ENST00000379013 STK31Q9BXU1 1019 aa17.78■□□□□ 0.44
UPK1A-202ENST00000379013 CARMIL3Q8ND23 1372 aa17.78■□□□□ 0.44
UPK1A-202ENST00000379013 ERBB4Q15303 1308 aa17.77■□□□□ 0.44
UPK1A-202ENST00000379013 A0A087WZG4 1122 aa17.76■□□□□ 0.43
UPK1A-202ENST00000379013 ALDH1L2Q3SY69 923 aa17.76■□□□□ 0.43
UPK1A-202ENST00000379013 HDGFL1Q5TGJ6 251 aa17.76■□□□□ 0.43
UPK1A-202ENST00000379013 ARHGAP27Q6ZUM4 889 aa17.76■□□□□ 0.43
UPK1A-202ENST00000379013 ADCY9O60503 1353 aa17.76■□□□□ 0.43
UPK1A-202ENST00000379013 C8orf58Q8NAV2 365 aa17.75■□□□□ 0.43
UPK1A-202ENST00000379013 PIM2Q9P1W9 311 aa17.75■□□□□ 0.43
UPK1A-202ENST00000379013 AFDNP55196 1824 aaKnown RBP17.75■□□□□ 0.43
UPK1A-202ENST00000379013 ATP10DQ9P241 1426 aa17.74■□□□□ 0.43
UPK1A-202ENST00000379013 NPM2Q86SE8 214 aaKnown RBP17.74■□□□□ 0.43
UPK1A-202ENST00000379013 DZIP3Q86Y13 1208 aaKnown RBP17.74■□□□□ 0.43
UPK1A-202ENST00000379013 VAMP4O75379 141 aa17.73■□□□□ 0.43
UPK1A-202ENST00000379013 PRELPP51888 382 aa17.73■□□□□ 0.43
UPK1A-202ENST00000379013 HLFQ16534 295 aa17.73■□□□□ 0.43
UPK1A-202ENST00000379013 DALRD3Q5D0E6 543 aaKnown RBP17.73■□□□□ 0.43
UPK1A-202ENST00000379013 PRR5LQ6MZQ0 368 aa17.73■□□□□ 0.43
UPK1A-202ENST00000379013 DBF4Q9UBU7 674 aaPredicted RBP17.73■□□□□ 0.43
UPK1A-202ENST00000379013 RCAN3Q9UKA8 241 aa17.73■□□□□ 0.43
UPK1A-202ENST00000379013 KIF16BQ96L93 1317 aa17.72■□□□□ 0.43
UPK1A-202ENST00000379013 ELL2O00472 640 aaPredicted RBP17.72■□□□□ 0.43
UPK1A-202ENST00000379013 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.72■□□□□ 0.43
UPK1A-202ENST00000379013 ZNF526Q8TF50 670 aaPredicted RBP17.72■□□□□ 0.43
UPK1A-202ENST00000379013 BRCA1P38398 1863 aaKnown RBP17.71■□□□□ 0.43
UPK1A-202ENST00000379013 EIF2S2P20042 333 aaKnown RBP17.71■□□□□ 0.43
UPK1A-202ENST00000379013 C1QTNF8P60827 252 aa17.71■□□□□ 0.43
UPK1A-202ENST00000379013 C2CD5Q86YS7 1000 aa17.71■□□□□ 0.43
UPK1A-202ENST00000379013 TSPYL6Q8N831 410 aa17.71■□□□□ 0.43
UPK1A-202ENST00000379013 NRXN2Q9P2S2 1712 aa17.71■□□□□ 0.43
UPK1A-202ENST00000379013 KRT24Q2M2I5 525 aa17.7■□□□□ 0.42
UPK1A-202ENST00000379013 TTLL7Q6ZT98 887 aa17.7■□□□□ 0.42
UPK1A-202ENST00000379013 SMC4Q9NTJ3 1288 aa17.7■□□□□ 0.42
UPK1A-202ENST00000379013 HYPKQ9NX55 129 aa17.7■□□□□ 0.42
UPK1A-202ENST00000379013 LRP10Q7Z4F1 713 aa17.69■□□□□ 0.42
UPK1A-202ENST00000379013 SETDB2Q96T68 719 aa17.69■□□□□ 0.42
UPK1A-202ENST00000379013 IPO8O15397 1037 aaKnown RBP17.68■□□□□ 0.42
UPK1A-202ENST00000379013 RARSP54136 660 aaKnown RBP17.68■□□□□ 0.42
UPK1A-202ENST00000379013 PDIA6Q15084 440 aa17.68■□□□□ 0.42
UPK1A-202ENST00000379013 BRIP1Q9BX63 1249 aa17.68■□□□□ 0.42
UPK1A-202ENST00000379013 DDX21Q9NR30 783 aaKnown RBP eCLIP17.68■□□□□ 0.42
UPK1A-202ENST00000379013 MS4A1P11836 297 aa17.67■□□□□ 0.42
UPK1A-202ENST00000379013 BRPF1P55201 1214 aaPredicted RBP17.67■□□□□ 0.42
UPK1A-202ENST00000379013 PROSER3Q2NL68 480 aa17.67■□□□□ 0.42
UPK1A-202ENST00000379013 C9orf131Q5VYM1 1079 aa17.67■□□□□ 0.42
UPK1A-202ENST00000379013 CLEC4GQ6UXB4 293 aa17.67■□□□□ 0.42
UPK1A-202ENST00000379013 DDX58O95786 925 aaKnown RBP17.66■□□□□ 0.42
UPK1A-202ENST00000379013 ANXA1P04083 346 aa17.66■□□□□ 0.42
UPK1A-202ENST00000379013 RASSF7Q02833 373 aa17.66■□□□□ 0.42
UPK1A-202ENST00000379013 PTPRCP08575 1304 aa17.66■□□□□ 0.42
UPK1A-202ENST00000379013 H0YIN7 160 aa17.65■□□□□ 0.42
UPK1A-202ENST00000379013 KIF3CO14782 793 aa17.65■□□□□ 0.42
UPK1A-202ENST00000379013 SLC4A2P04920 1241 aa17.65■□□□□ 0.42
UPK1A-202ENST00000379013 MYL6BP14649 208 aa17.65■□□□□ 0.42
UPK1A-202ENST00000379013 TTLL6Q8N841 843 aa17.65■□□□□ 0.42
UPK1A-202ENST00000379013 SSH1Q8WYL5 1049 aa17.65■□□□□ 0.42
UPK1A-202ENST00000379013 GPBP1L1Q9HC44 474 aaPredicted RBP17.65■□□□□ 0.42
UPK1A-202ENST00000379013 CHPF2Q9P2E5 772 aa17.65■□□□□ 0.42
UPK1A-202ENST00000379013 ANKRD31Q8N7Z5 1873 aa17.65■□□□□ 0.42
UPK1A-202ENST00000379013 SCN7AQ01118 1682 aa17.64■□□□□ 0.42
UPK1A-202ENST00000379013 FAM177BA6PVY3 158 aa17.64■□□□□ 0.41
UPK1A-202ENST00000379013 ZNF622Q969S3 477 aaKnown RBP eCLIP17.64■□□□□ 0.41
UPK1A-202ENST00000379013 NIP7Q9Y221 180 aaKnown RBP eCLIP17.64■□□□□ 0.41
UPK1A-202ENST00000379013 NFKBIEO00221 500 aa17.63■□□□□ 0.41
UPK1A-202ENST00000379013 CNBD1Q8NA66 436 aa17.63■□□□□ 0.41
UPK1A-202ENST00000379013 NECTIN2Q92692 538 aa17.63■□□□□ 0.41
UPK1A-202ENST00000379013 ZNF219Q9P2Y4 722 aaPredicted RBP17.63■□□□□ 0.41
UPK1A-202ENST00000379013 SRGNP10124 158 aa17.62■□□□□ 0.41
UPK1A-202ENST00000379013 NBPF5PQ86XG9 351 aaPredicted RBP17.62■□□□□ 0.41
UPK1A-202ENST00000379013 ARHGAP45Q92619 1136 aa17.62■□□□□ 0.41
UPK1A-202ENST00000379013 ARFGEF1Q9Y6D6 1849 aa17.62■□□□□ 0.41
UPK1A-202ENST00000379013 ARFGEF2Q9Y6D5 1785 aa17.61■□□□□ 0.41
UPK1A-202ENST00000379013 KLRG2A4D1S0 409 aaPredicted RBP17.61■□□□□ 0.41
UPK1A-202ENST00000379013 C21orf2O43822 256 aa17.61■□□□□ 0.41
UPK1A-202ENST00000379013 PDE6BP35913 854 aa17.61■□□□□ 0.41
UPK1A-202ENST00000379013 FLIIQ13045 1269 aa17.61■□□□□ 0.41
UPK1A-202ENST00000379013 ZKSCAN2Q63HK3 967 aa17.61■□□□□ 0.41
UPK1A-202ENST00000379013 KIF6Q6ZMV9 814 aa17.61■□□□□ 0.41
UPK1A-202ENST00000379013 MRPL50Q8N5N7 158 aaKnown RBP17.61■□□□□ 0.41
UPK1A-202ENST00000379013 API5Q9BZZ5 524 aaKnown RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms