RNA–Protein interactions for RNA: ENST00000378747.7

OPTN-202, Transcript of optineurin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene OPTN, Length 3,400 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-202ENST00000378747 ZKSCAN5Q9Y2L8 839 aa10.78□□□□□ -0.68
OPTN-202ENST00000378747 SHANK3Q9BYB0 1731 aa10.78□□□□□ -0.68
OPTN-202ENST00000378747 CEBPAP49715 358 aaPredicted RBP10.78□□□□□ -0.68
OPTN-202ENST00000378747 PDIA6Q15084 440 aa10.78□□□□□ -0.68
OPTN-202ENST00000378747 AMOTQ4VCS5 1084 aa10.78□□□□□ -0.68
OPTN-202ENST00000378747 ARHGEF25Q86VW2 580 aa10.78□□□□□ -0.68
OPTN-202ENST00000378747 PDIA4P13667 645 aaKnown RBP10.77□□□□□ -0.68
OPTN-202ENST00000378747 VPS53Q5VIR6 699 aa10.77□□□□□ -0.68
OPTN-202ENST00000378747 ILDR1Q86SU0 546 aaPredicted RBP10.77□□□□□ -0.68
OPTN-202ENST00000378747 TICAM2Q86XR7 235 aa10.77□□□□□ -0.68
OPTN-202ENST00000378747 RASEFQ8IZ41 740 aa10.77□□□□□ -0.69
OPTN-202ENST00000378747 LGR6Q9HBX8 967 aa10.77□□□□□ -0.69
OPTN-202ENST00000378747 PHF8Q9UPP1 1060 aa10.77□□□□□ -0.69
OPTN-202ENST00000378747 RNMTO43148 476 aaKnown RBP10.77□□□□□ -0.69
OPTN-202ENST00000378747 KDM6AO15550 1401 aaPredicted RBP10.77□□□□□ -0.69
OPTN-202ENST00000378747 GIGYF1O75420 1035 aaPredicted RBP10.76□□□□□ -0.69
OPTN-202ENST00000378747 GLRX3O76003 335 aaKnown RBP10.76□□□□□ -0.69
OPTN-202ENST00000378747 FAM184AQ8NB25 1140 aa10.76□□□□□ -0.69
OPTN-202ENST00000378747 TRIM44Q96DX7 344 aaPredicted RBP10.76□□□□□ -0.69
OPTN-202ENST00000378747 CHPF2Q9P2E5 772 aa10.76□□□□□ -0.69
OPTN-202ENST00000378747 CNTROBQ8N137 903 aa10.76□□□□□ -0.69
OPTN-202ENST00000378747 ZSCAN22P10073 491 aaPredicted RBP10.75□□□□□ -0.69
OPTN-202ENST00000378747 CHAMP1Q96JM3 812 aa10.75□□□□□ -0.69
OPTN-202ENST00000378747 LIMCH1Q9UPQ0 1083 aa10.75□□□□□ -0.69
OPTN-202ENST00000378747 LETM1O95202 739 aaPredicted RBP10.75□□□□□ -0.69
OPTN-202ENST00000378747 USPL1Q5W0Q7 1092 aa10.75□□□□□ -0.69
OPTN-202ENST00000378747 KSR2Q6VAB6 950 aa10.75□□□□□ -0.69
OPTN-202ENST00000378747 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.75□□□□□ -0.69
OPTN-202ENST00000378747 USP48Q86UV5 1035 aa10.75□□□□□ -0.69
OPTN-202ENST00000378747 ANO2Q9NQ90 1003 aa10.75□□□□□ -0.69
OPTN-202ENST00000378747 DBF4Q9UBU7 674 aaPredicted RBP10.75□□□□□ -0.69
OPTN-202ENST00000378747 STRCP1A6NGW2 1772 aa10.75□□□□□ -0.69
OPTN-202ENST00000378747 AK2P54819 239 aa10.75□□□□□ -0.69
OPTN-202ENST00000378747 ABTB2Q8N961 1025 aa10.75□□□□□ -0.69
OPTN-202ENST00000378747 MAP4K1Q92918 833 aa10.75□□□□□ -0.69
OPTN-202ENST00000378747 PKNOX2Q96KN3 472 aa10.75□□□□□ -0.69
OPTN-202ENST00000378747 SYCE3A1L190 88 aa10.74□□□□□ -0.69
OPTN-202ENST00000378747 ERC1Q8IUD2 1116 aa10.74□□□□□ -0.69
OPTN-202ENST00000378747 CCDC39Q9UFE4 941 aa10.74□□□□□ -0.69
OPTN-202ENST00000378747 ELP1O95163 1332 aa10.74□□□□□ -0.69
OPTN-202ENST00000378747 KCNQ3O43525 872 aa10.74□□□□□ -0.69
OPTN-202ENST00000378747 GADD45BO75293 160 aaPredicted RBP10.74□□□□□ -0.69
OPTN-202ENST00000378747 SH2B1Q9NRF2 756 aaPredicted RBP10.74□□□□□ -0.69
OPTN-202ENST00000378747 SETD1BQ9UPS6 1966 aaKnown RBP10.74□□□□□ -0.69
OPTN-202ENST00000378747 NUTM2FA1L443 756 aa10.74□□□□□ -0.69
OPTN-202ENST00000378747 PI4KAP2A4QPH2 592 aa10.74□□□□□ -0.69
OPTN-202ENST00000378747 APBB1O00213 710 aa10.74□□□□□ -0.69
OPTN-202ENST00000378747 RBM43Q6ZSC3 357 aaKnown RBP10.74□□□□□ -0.69
OPTN-202ENST00000378747 NUTM1Q86Y26 1132 aa10.74□□□□□ -0.69
OPTN-202ENST00000378747 PI4KAP1Q8N8J0 262 aa10.74□□□□□ -0.69
OPTN-202ENST00000378747 ZSCAN31Q96LW9 406 aaPredicted RBP10.74□□□□□ -0.69
OPTN-202ENST00000378747 TSPY26PQ9H489 355 aa10.74□□□□□ -0.69
OPTN-202ENST00000378747 SRGAP3O43295 1099 aa10.73□□□□□ -0.69
OPTN-202ENST00000378747 UBE2HP62256 183 aa10.73□□□□□ -0.69
OPTN-202ENST00000378747 SYAP1Q96A49 352 aaPredicted RBP10.73□□□□□ -0.69
OPTN-202ENST00000378747 SURF6O75683 361 aaKnown RBP10.73□□□□□ -0.69
OPTN-202ENST00000378747 PHF14O94880 888 aa10.73□□□□□ -0.69
OPTN-202ENST00000378747 F13A1P00488 732 aa10.73□□□□□ -0.69
OPTN-202ENST00000378747 CCDC183Q5T5S1 534 aa10.73□□□□□ -0.69
OPTN-202ENST00000378747 FBXO41Q8TF61 875 aa10.73□□□□□ -0.69
OPTN-202ENST00000378747 EVI5LQ96CN4 794 aa10.73□□□□□ -0.69
OPTN-202ENST00000378747 ECHDC1Q9NTX5 307 aa10.73□□□□□ -0.69
OPTN-202ENST00000378747 SPTLC3Q9NUV7 552 aa10.73□□□□□ -0.69
OPTN-202ENST00000378747 MTMR6Q9Y217 621 aa10.73□□□□□ -0.69
OPTN-202ENST00000378747 DCCP43146 1447 aa10.73□□□□□ -0.69
OPTN-202ENST00000378747 SASH1O94885 1247 aa10.72□□□□□ -0.69
OPTN-202ENST00000378747 SYT1P21579 422 aa10.72□□□□□ -0.69
OPTN-202ENST00000378747 RILPL2Q969X0 211 aa10.72□□□□□ -0.69
OPTN-202ENST00000378747 COL22A1Q8NFW1 1626 aaPredicted RBP10.72□□□□□ -0.69
OPTN-202ENST00000378747 PTH1RQ03431 593 aa10.72□□□□□ -0.69
OPTN-202ENST00000378747 PLEKHO1Q53GL0 409 aaPredicted RBP10.72□□□□□ -0.69
OPTN-202ENST00000378747 LINS1Q8NG48 757 aa10.72□□□□□ -0.69
OPTN-202ENST00000378747 IL1RAPL2Q9NP60 686 aa10.72□□□□□ -0.69
OPTN-202ENST00000378747 HDAC5Q9UQL6 1122 aa10.72□□□□□ -0.69
OPTN-202ENST00000378747 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.72□□□□□ -0.69
OPTN-202ENST00000378747 STX6O43752 255 aa10.72□□□□□ -0.69
OPTN-202ENST00000378747 LARGE1O95461 756 aa10.72□□□□□ -0.69
OPTN-202ENST00000378747 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.72□□□□□ -0.69
OPTN-202ENST00000378747 ABCA3Q99758 1704 aa10.71□□□□□ -0.69
OPTN-202ENST00000378747 TRIM6-TRIM34B2RNG4 842 aa10.71□□□□□ -0.69
OPTN-202ENST00000378747 GTF2F1P35269 517 aaKnown RBP eCLIP10.71□□□□□ -0.69
OPTN-202ENST00000378747 RFX5P48382 616 aaPredicted RBP10.71□□□□□ -0.69
OPTN-202ENST00000378747 CSPP1Q1MSJ5 1256 aa10.71□□□□□ -0.69
OPTN-202ENST00000378747 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.71□□□□□ -0.695e-7■■□□□ 14.1
OPTN-202ENST00000378747 C1orf167Q5SNV9 1468 aa10.71□□□□□ -0.69
OPTN-202ENST00000378747 RABL6Q3YEC7 729 aaPredicted RBP10.71□□□□□ -0.69
OPTN-202ENST00000378747 DDX21Q9NR30 783 aaKnown RBP eCLIP10.71□□□□□ -0.69
OPTN-202ENST00000378747 NWD2Q9ULI1 1742 aa10.71□□□□□ -0.7
OPTN-202ENST00000378747 XIRP1Q702N8 1843 aaKnown RBP10.71□□□□□ -0.7
OPTN-202ENST00000378747 BTBD11A6QL63 1104 aa10.71□□□□□ -0.7
OPTN-202ENST00000378747 HIP1O00291 1037 aa10.71□□□□□ -0.7
OPTN-202ENST00000378747 ANP32BQ92688 251 aaKnown RBP10.71□□□□□ -0.7
OPTN-202ENST00000378747 UPF3BQ9BZI7 483 aaKnown RBP10.71□□□□□ -0.7
OPTN-202ENST00000378747 PROSER3Q2NL68 480 aa10.7□□□□□ -0.7
OPTN-202ENST00000378747 RUFY2Q8WXA3 655 aa10.7□□□□□ -0.7
OPTN-202ENST00000378747 KCPQ6ZWJ8 1503 aa10.7□□□□□ -0.7
OPTN-202ENST00000378747 IGKV5-2P06315 115 aa10.7□□□□□ -0.7
OPTN-202ENST00000378747 ADCK5Q3MIX3 580 aa10.7□□□□□ -0.7
OPTN-202ENST00000378747 KIAA1211Q6ZU35 1233 aa10.7□□□□□ -0.7
OPTN-202ENST00000378747 USHBP1Q8N6Y0 703 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms