RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 MAP3K15Q6ZN16 1313 aa24.12■■□□□ 1.45
SSU72-203ENST00000378725 XAGE3Q8WTP9 111 aa24.12■■□□□ 1.45
SSU72-203ENST00000378725 LRP5O75197 1615 aa24.12■■□□□ 1.45
SSU72-203ENST00000378725 MMP10P09238 476 aa24.11■■□□□ 1.45
SSU72-203ENST00000378725 KIF6Q6ZMV9 814 aa24.11■■□□□ 1.45
SSU72-203ENST00000378725 HLFQ16534 295 aa24.1■■□□□ 1.45
SSU72-203ENST00000378725 STK31Q9BXU1 1019 aa24.1■■□□□ 1.45
SSU72-203ENST00000378725 AIMP1Q12904 312 aaKnown RBP24.09■■□□□ 1.45
SSU72-203ENST00000378725 NFIXQ14938 502 aa24.09■■□□□ 1.45
SSU72-203ENST00000378725 PHAXQ9H814 394 aaKnown RBP24.09■■□□□ 1.45
SSU72-203ENST00000378725 ZNF652Q9Y2D9 606 aa24.09■■□□□ 1.45
SSU72-203ENST00000378725 TCERG1O14776 1098 aaKnown RBP24.08■■□□□ 1.45
SSU72-203ENST00000378725 SLC4A2P04920 1241 aa24.08■■□□□ 1.45
SSU72-203ENST00000378725 CT47B1P0C2W7 299 aaPredicted RBP24.08■■□□□ 1.45
SSU72-203ENST00000378725 TBC1D9BQ66K14 1250 aa24.08■■□□□ 1.45
SSU72-203ENST00000378725 ZNF428Q96B54 188 aa24.08■■□□□ 1.45
SSU72-203ENST00000378725 SCN7AQ01118 1682 aa24.08■■□□□ 1.44
SSU72-203ENST00000378725 DDR1Q08345 913 aa24.07■■□□□ 1.44
SSU72-203ENST00000378725 GIGYF2Q6Y7W6 1299 aaKnown RBP24.07■■□□□ 1.44
SSU72-203ENST00000378725 ZBTB3Q9H5J0 574 aa24.07■■□□□ 1.44
SSU72-203ENST00000378725 POLRMTO00411 1230 aaKnown RBP24.06■■□□□ 1.44
SSU72-203ENST00000378725 ANKRD13DQ6ZTN6 518 aa24.06■■□□□ 1.44
SSU72-203ENST00000378725 PLBD2Q8NHP8 589 aa24.06■■□□□ 1.44
SSU72-203ENST00000378725 PARP3Q9Y6F1 533 aa24.06■■□□□ 1.44
SSU72-203ENST00000378725 BCORQ6W2J9 1755 aa24.05■■□□□ 1.44
SSU72-203ENST00000378725 BICDL1Q6ZP65 573 aa24.04■■□□□ 1.44
SSU72-203ENST00000378725 G2E3Q7L622 706 aa24.04■■□□□ 1.44
SSU72-203ENST00000378725 SETDB2Q96T68 719 aa24.04■■□□□ 1.44
SSU72-203ENST00000378725 PPP1R1BQ9UD71 204 aaPredicted RBP24.04■■□□□ 1.44
SSU72-203ENST00000378725 ZNF34Q8IZ26 560 aa24.02■■□□□ 1.44
SSU72-203ENST00000378725 ATP10DQ9P241 1426 aa24.01■■□□□ 1.43
SSU72-203ENST00000378725 DDX58O95786 925 aaKnown RBP24.01■■□□□ 1.43
SSU72-203ENST00000378725 SERPINB2P05120 415 aa24.01■■□□□ 1.43
SSU72-203ENST00000378725 ALDH1L2Q3SY69 923 aa24.01■■□□□ 1.43
SSU72-203ENST00000378725 NIP7Q9Y221 180 aaKnown RBP eCLIP24.01■■□□□ 1.43
SSU72-203ENST00000378725 FLIIQ13045 1269 aa24■■□□□ 1.43
SSU72-203ENST00000378725 TCIRG1Q13488 830 aa24■■□□□ 1.43
SSU72-203ENST00000378725 HSP90AB3PQ58FF7 597 aa24■■□□□ 1.43
SSU72-203ENST00000378725 MRPL50Q8N5N7 158 aaKnown RBP24■■□□□ 1.43
SSU72-203ENST00000378725 SSH1Q8WYL5 1049 aa24■■□□□ 1.43
SSU72-203ENST00000378725 CARMIL3Q8ND23 1372 aa24■■□□□ 1.43
SSU72-203ENST00000378725 KSR2Q6VAB6 950 aa23.99■■□□□ 1.43
SSU72-203ENST00000378725 RIC3Q7Z5B4 369 aa23.99■■□□□ 1.43
SSU72-203ENST00000378725 CD2APQ9Y5K6 639 aa23.99■■□□□ 1.43
SSU72-203ENST00000378725 FHDC1Q9C0D6 1143 aaPredicted RBP23.98■■□□□ 1.43
SSU72-203ENST00000378725 UBN2Q6ZU65 1347 aa23.96■■□□□ 1.43
SSU72-203ENST00000378725 PI4KAP2A4QPH2 592 aa23.96■■□□□ 1.43
SSU72-203ENST00000378725 RARSP54136 660 aaKnown RBP23.96■■□□□ 1.43
SSU72-203ENST00000378725 BRPF1P55201 1214 aaPredicted RBP23.96■■□□□ 1.43
SSU72-203ENST00000378725 TRIM28Q13263 835 aaKnown RBP23.96■■□□□ 1.43
SSU72-203ENST00000378725 PARP10Q53GL7 1025 aa23.96■■□□□ 1.43
SSU72-203ENST00000378725 PI4KAP1Q8N8J0 262 aa23.96■■□□□ 1.43
SSU72-203ENST00000378725 SYT17Q9BSW7 474 aa23.96■■□□□ 1.43
SSU72-203ENST00000378725 ISCA1Q9BUE6 129 aa23.96■■□□□ 1.43
SSU72-203ENST00000378725 NUP98P52948 1817 aa23.96■■□□□ 1.43
SSU72-203ENST00000378725 ADCY9O60503 1353 aa23.95■■□□□ 1.42
SSU72-203ENST00000378725 GPTP24298 496 aa23.95■■□□□ 1.42
SSU72-203ENST00000378725 TPTE2Q6XPS3 522 aa23.95■■□□□ 1.42
SSU72-203ENST00000378725 METTL22Q9BUU2 404 aaPredicted RBP23.95■■□□□ 1.42
SSU72-203ENST00000378725 MAP3K2Q9Y2U5 619 aa23.95■■□□□ 1.42
SSU72-203ENST00000378725 NRXN2Q9P2S2 1712 aa23.95■■□□□ 1.42
SSU72-203ENST00000378725 FKBP5Q13451 457 aaPredicted RBP23.94■■□□□ 1.42
SSU72-203ENST00000378725 SUSD4Q5VX71 490 aa23.94■■□□□ 1.42
SSU72-203ENST00000378725 PRR5LQ6MZQ0 368 aa23.94■■□□□ 1.42
SSU72-203ENST00000378725 NBPF5PQ86XG9 351 aaPredicted RBP23.94■■□□□ 1.42
SSU72-203ENST00000378725 C10orf71Q711Q0 1435 aa23.93■■□□□ 1.42
SSU72-203ENST00000378725 CACNA1FO60840 1977 aa23.93■■□□□ 1.42
SSU72-203ENST00000378725 NLRP10Q86W26 655 aa23.93■■□□□ 1.42
SSU72-203ENST00000378725 IBTKQ9P2D0 1353 aaPredicted RBP23.92■■□□□ 1.42
SSU72-203ENST00000378725 PPP1R42Q7Z4L9 355 aa23.92■■□□□ 1.42
SSU72-203ENST00000378725 CNBD1Q8NA66 436 aa23.92■■□□□ 1.42
SSU72-203ENST00000378725 YTHDC1Q96MU7 727 aaKnown RBP23.92■■□□□ 1.42
SSU72-203ENST00000378725 BCL2L13Q9BXK5 485 aa23.92■■□□□ 1.42
SSU72-203ENST00000378725 NYXQ9GZU5 481 aa23.92■■□□□ 1.42
SSU72-203ENST00000378725 SMC4Q9NTJ3 1288 aa23.92■■□□□ 1.42
SSU72-203ENST00000378725 ATP5J2-PTCD1G3V325 749 aa23.91■■□□□ 1.42
SSU72-203ENST00000378725 TGFB2P61812 414 aa23.91■■□□□ 1.42
SSU72-203ENST00000378725 MYD88Q99836 296 aa23.91■■□□□ 1.42
SSU72-203ENST00000378725 PTPRCP08575 1304 aa23.9■■□□□ 1.42
SSU72-203ENST00000378725 NTSR2O95665 410 aa23.9■■□□□ 1.42
SSU72-203ENST00000378725 KLHL34Q8N239 644 aa23.9■■□□□ 1.42
SSU72-203ENST00000378725 DNAAF4Q8WXU2 420 aa23.9■■□□□ 1.42
SSU72-203ENST00000378725 UTP14AQ9BVJ6 771 aaKnown RBP23.9■■□□□ 1.42
SSU72-203ENST00000378725 BRIP1Q9BX63 1249 aa23.9■■□□□ 1.42
SSU72-203ENST00000378725 FAM177BA6PVY3 158 aa23.89■■□□□ 1.41
SSU72-203ENST00000378725 NLGN2Q8NFZ4 835 aa23.89■■□□□ 1.41
SSU72-203ENST00000378725 AFDNP55196 1824 aaKnown RBP23.89■■□□□ 1.41
SSU72-203ENST00000378725 ARFGEF2Q9Y6D5 1785 aa23.88■■□□□ 1.41
SSU72-203ENST00000378725 IGKV5-2P06315 115 aa23.88■■□□□ 1.41
SSU72-203ENST00000378725 ST5P78524 1137 aa23.88■■□□□ 1.41
SSU72-203ENST00000378725 CCDC191Q8NCU4 936 aa23.88■■□□□ 1.41
SSU72-203ENST00000378725 RNF123Q5XPI4 1314 aa23.87■■□□□ 1.41
SSU72-203ENST00000378725 F6X3S4 739 aa23.87■■□□□ 1.41
SSU72-203ENST00000378725 NEXNQ0ZGT2 675 aa23.87■■□□□ 1.41
SSU72-203ENST00000378725 CCDC24Q8N4L8 307 aa23.87■■□□□ 1.41
SSU72-203ENST00000378725 KIF13BQ9NQT8 1826 aa23.87■■□□□ 1.41
SSU72-203ENST00000378725 NPHP1O15259 732 aa23.86■■□□□ 1.41
SSU72-203ENST00000378725 GTF2E1P29083 439 aaPredicted RBP23.86■■□□□ 1.41
SSU72-203ENST00000378725 ERFEQ4G0M1 354 aa23.86■■□□□ 1.41
SSU72-203ENST00000378725 SLC10A5Q5PT55 438 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms