RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 CEP85Q6P2H3 762 aa13.17□□□□□ -0.3
RPGR-203ENST00000378505 CWC15Q9P013 229 aaKnown RBP13.17□□□□□ -0.3
RPGR-203ENST00000378505 GOLGA8BA8MQT2 603 aa13.16□□□□□ -0.3
RPGR-203ENST00000378505 CAVIN2O95810 425 aa13.16□□□□□ -0.3
RPGR-203ENST00000378505 PTPN14Q15678 1187 aa13.16□□□□□ -0.3
RPGR-203ENST00000378505 MTHFSDQ2M296 383 aaKnown RBP13.16□□□□□ -0.3
RPGR-203ENST00000378505 UVSSAQ2YD98 709 aa13.16□□□□□ -0.3
RPGR-203ENST00000378505 ODF2Q5BJF6 829 aa13.16□□□□□ -0.3
RPGR-203ENST00000378505 NOM1Q5C9Z4 860 aaKnown RBP13.16□□□□□ -0.3
RPGR-203ENST00000378505 TXLNBQ8N3L3 684 aa13.16□□□□□ -0.3
RPGR-203ENST00000378505 DISP1Q96F81 1524 aa13.16□□□□□ -0.3
RPGR-203ENST00000378505 FLT4P35916 1363 aa13.16□□□□□ -0.3
RPGR-203ENST00000378505 ERLIN1O75477 346 aa13.16□□□□□ -0.3
RPGR-203ENST00000378505 LDHAL6AQ6ZMR3 332 aa13.16□□□□□ -0.3
RPGR-203ENST00000378505 FSIP1Q8NA03 581 aa13.16□□□□□ -0.3
RPGR-203ENST00000378505 RNF41Q9H4P4 317 aaPredicted RBP13.16□□□□□ -0.3
RPGR-203ENST00000378505 ZSCAN22P10073 491 aaPredicted RBP13.16□□□□□ -0.3
RPGR-203ENST00000378505 SLC5A1P13866 664 aa13.16□□□□□ -0.3
RPGR-203ENST00000378505 KSR2Q6VAB6 950 aa13.16□□□□□ -0.3
RPGR-203ENST00000378505 BICDL1Q6ZP65 573 aa13.16□□□□□ -0.3
RPGR-203ENST00000378505 MYO6Q9UM54 1294 aa13.16□□□□□ -0.3
RPGR-203ENST00000378505 SLC12A7Q9Y666 1083 aa13.16□□□□□ -0.3
RPGR-203ENST00000378505 ZSCAN23Q3MJ62 389 aa13.15□□□□□ -0.3
RPGR-203ENST00000378505 UBXN4Q92575 508 aa13.15□□□□□ -0.3
RPGR-203ENST00000378505 RBM27Q9P2N5 1060 aaKnown RBP13.15□□□□□ -0.3
RPGR-203ENST00000378505 GRM8O00222 908 aa13.15□□□□□ -0.3
RPGR-203ENST00000378505 IQCA1Q86XH1 822 aa13.15□□□□□ -0.3
RPGR-203ENST00000378505 PDCL2Q8N4E4 241 aa13.15□□□□□ -0.3
RPGR-203ENST00000378505 ZNF287Q9HBT7 754 aa13.15□□□□□ -0.3
RPGR-203ENST00000378505 USP16Q9Y5T5 823 aa13.15□□□□□ -0.3
RPGR-203ENST00000378505 IFIT3O14879 490 aaKnown RBP13.15□□□□□ -0.3
RPGR-203ENST00000378505 EPB41L2O43491 1005 aaKnown RBP13.15□□□□□ -0.3
RPGR-203ENST00000378505 AKAP4Q5JQC9 854 aa13.15□□□□□ -0.3
RPGR-203ENST00000378505 CTCFLQ8NI51 663 aaPredicted RBP13.15□□□□□ -0.3
RPGR-203ENST00000378505 CLIP2Q9UDT6 1046 aa13.15□□□□□ -0.3
RPGR-203ENST00000378505 ZNF165P49910 485 aa13.15□□□□□ -0.31
RPGR-203ENST00000378505 PLEKHM2Q8IWE5 1019 aa13.15□□□□□ -0.31
RPGR-203ENST00000378505 ZHX3Q9H4I2 956 aa13.15□□□□□ -0.31
RPGR-203ENST00000378505 SNRKQ9NRH2 765 aa13.15□□□□□ -0.31
RPGR-203ENST00000378505 NEMFO60524 1076 aa13.14□□□□□ -0.31
RPGR-203ENST00000378505 SEC24BO95487 1268 aa13.14□□□□□ -0.31
RPGR-203ENST00000378505 ARHGAP29Q52LW3 1261 aa13.14□□□□□ -0.31
RPGR-203ENST00000378505 LRSAM1Q6UWE0 723 aa13.14□□□□□ -0.31
RPGR-203ENST00000378505 TANGO6Q9C0B7 1094 aa13.14□□□□□ -0.31
RPGR-203ENST00000378505 XRCC6P12956 609 aaKnown RBP eCLIP13.14□□□□□ -0.31
RPGR-203ENST00000378505 TTF1Q15361 905 aaPredicted RBP13.14□□□□□ -0.31
RPGR-203ENST00000378505 LINS1Q8NG48 757 aa13.14□□□□□ -0.31
RPGR-203ENST00000378505 KIF18AQ8NI77 898 aa13.14□□□□□ -0.31
RPGR-203ENST00000378505 PIBF1Q8WXW3 757 aa13.14□□□□□ -0.31
RPGR-203ENST00000378505 ZSCAN16Q9H4T2 348 aaPredicted RBP13.14□□□□□ -0.31
RPGR-203ENST00000378505 ORC3Q9UBD5 711 aaPredicted RBP13.14□□□□□ -0.31
RPGR-203ENST00000378505 ZBTB7BO15156 539 aaPredicted RBP13.14□□□□□ -0.31
RPGR-203ENST00000378505 CADPS2Q86UW7 1296 aa13.14□□□□□ -0.31
RPGR-203ENST00000378505 XAGE3Q8WTP9 111 aa13.14□□□□□ -0.31
RPGR-203ENST00000378505 PHAXQ9H814 394 aaKnown RBP13.14□□□□□ -0.31
RPGR-203ENST00000378505 GOLGA8AA7E2F4 631 aa13.13□□□□□ -0.31
RPGR-203ENST00000378505 ADCY5O95622 1261 aa13.13□□□□□ -0.31
RPGR-203ENST00000378505 GPTP24298 496 aa13.13□□□□□ -0.31
RPGR-203ENST00000378505 KRT24Q2M2I5 525 aa13.13□□□□□ -0.31
RPGR-203ENST00000378505 COPS6Q7L5N1 327 aa13.13□□□□□ -0.31
RPGR-203ENST00000378505 RBM8AQ9Y5S9 174 aaKnown RBP13.13□□□□□ -0.31
RPGR-203ENST00000378505 ZSCAN12O43309 604 aa13.13□□□□□ -0.31
RPGR-203ENST00000378505 SSBP05455 408 aaKnown RBP eCLIP13.13□□□□□ -0.31
RPGR-203ENST00000378505 ZFYVE27Q5T4F4 411 aa13.13□□□□□ -0.31
RPGR-203ENST00000378505 CCDC82Q8N4S0 544 aa13.13□□□□□ -0.31
RPGR-203ENST00000378505 EIF5P55010 431 aaKnown RBP13.13□□□□□ -0.31
RPGR-203ENST00000378505 AXDND1Q5T1B0 1012 aaPredicted RBP13.13□□□□□ -0.31
RPGR-203ENST00000378505 BRF1Q92994 677 aa13.13□□□□□ -0.31
RPGR-203ENST00000378505 HCLS1P14317 486 aaPredicted RBP13.12□□□□□ -0.31
RPGR-203ENST00000378505 IARSP41252 1262 aaKnown RBP13.12□□□□□ -0.31
RPGR-203ENST00000378505 SOS1Q07889 1333 aaPredicted RBP13.12□□□□□ -0.31
RPGR-203ENST00000378505 RAB3GAP1Q15042 981 aa13.12□□□□□ -0.31
RPGR-203ENST00000378505 CCDC181Q5TID7 509 aa13.12□□□□□ -0.31
RPGR-203ENST00000378505 DDX46Q7L014 1031 aaKnown RBP13.12□□□□□ -0.31
RPGR-203ENST00000378505 EYA1Q99502 592 aa13.12□□□□□ -0.31
RPGR-203ENST00000378505 YTHDC2Q9H6S0 1430 aaKnown RBP13.12□□□□□ -0.31
RPGR-203ENST00000378505 ABCC1P33527 1531 aa13.12□□□□□ -0.31
RPGR-203ENST00000378505 KDM2BQ8NHM5 1336 aa13.12□□□□□ -0.31
RPGR-203ENST00000378505 RANBP6O60518 1105 aaKnown RBP13.12□□□□□ -0.31
RPGR-203ENST00000378505 EIF3JO75822 258 aaKnown RBP13.12□□□□□ -0.31
RPGR-203ENST00000378505 TOP1P11387 765 aaKnown RBP13.12□□□□□ -0.31
RPGR-203ENST00000378505 SSRP1Q08945 709 aaKnown RBP13.12□□□□□ -0.31
RPGR-203ENST00000378505 SYCP1Q15431 976 aa13.12□□□□□ -0.31
RPGR-203ENST00000378505 STX1AQ16623 288 aa13.12□□□□□ -0.31
RPGR-203ENST00000378505 NECAB1Q8N987 351 aa13.12□□□□□ -0.31
RPGR-203ENST00000378505 MKNK2Q9HBH9 465 aa13.12□□□□□ -0.31
RPGR-203ENST00000378505 TTC41PQ6P2S7 1318 aa13.12□□□□□ -0.31
RPGR-203ENST00000378505 EXOC5O00471 708 aa13.12□□□□□ -0.31
RPGR-203ENST00000378505 LEKR1Q6ZMV7 388 aa13.12□□□□□ -0.31
RPGR-203ENST00000378505 CNNM3Q8NE01 707 aa13.12□□□□□ -0.31
RPGR-203ENST00000378505 NCOA7Q8NI08 942 aa13.12□□□□□ -0.31
RPGR-203ENST00000378505 ZFYP08048 801 aaPredicted RBP13.11□□□□□ -0.31
RPGR-203ENST00000378505 USP5P45974 858 aa13.11□□□□□ -0.31
RPGR-203ENST00000378505 GSDMDP57764 484 aa13.11□□□□□ -0.31
RPGR-203ENST00000378505 HAND2P61296 217 aa13.11□□□□□ -0.31
RPGR-203ENST00000378505 JARID2Q92833 1246 aaPredicted RBP13.11□□□□□ -0.31
RPGR-203ENST00000378505 ZMYM4Q5VZL5 1548 aa13.11□□□□□ -0.31
RPGR-203ENST00000378505 CHRNA2Q15822 529 aa13.11□□□□□ -0.31
RPGR-203ENST00000378505 KLHL10Q6JEL2 608 aa13.11□□□□□ -0.31
RPGR-203ENST00000378505 GIMAP6Q6P9H5 292 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms