RNA–Protein interactions for RNA: ENST00000378362.3

GFRA3-202, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GFRA3, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-202ENST00000378362 SERPINB2P05120 415 aa28.39■■■□□ 2.13
GFRA3-202ENST00000378362 CD2APQ9Y5K6 639 aa28.39■■■□□ 2.13
GFRA3-202ENST00000378362 AFDNP55196 1824 aaKnown RBP28.37■■■□□ 2.13
GFRA3-202ENST00000378362 NCBP3Q53F19 620 aaKnown RBP28.37■■■□□ 2.13
GFRA3-202ENST00000378362 COPS6Q7L5N1 327 aa28.37■■■□□ 2.13
GFRA3-202ENST00000378362 XAGE3Q8WTP9 111 aa28.37■■■□□ 2.13
GFRA3-202ENST00000378362 ZNF428Q96B54 188 aa28.37■■■□□ 2.13
GFRA3-202ENST00000378362 IL16Q14005 1332 aa28.37■■■□□ 2.13
GFRA3-202ENST00000378362 A0A0G2JLW4 131 aa28.36■■■□□ 2.13
GFRA3-202ENST00000378362 DDX21Q9NR30 783 aaKnown RBP eCLIP28.36■■■□□ 2.13
GFRA3-202ENST00000378362 BCORQ6W2J9 1755 aa28.35■■■□□ 2.13
GFRA3-202ENST00000378362 KIF6Q6ZMV9 814 aa28.35■■■□□ 2.13
GFRA3-202ENST00000378362 SETDB2Q96T68 719 aa28.35■■■□□ 2.13
GFRA3-202ENST00000378362 ERBB4Q15303 1308 aa28.34■■■□□ 2.13
GFRA3-202ENST00000378362 MAP3K15Q6ZN16 1313 aa28.34■■■□□ 2.13
GFRA3-202ENST00000378362 ZNF521Q96K83 1311 aa28.34■■■□□ 2.13
GFRA3-202ENST00000378362 HOXB7P09629 217 aa28.34■■■□□ 2.13
GFRA3-202ENST00000378362 EXOSC9Q06265 439 aaKnown RBP28.34■■■□□ 2.13
GFRA3-202ENST00000378362 NIP7Q9Y221 180 aaKnown RBP eCLIP28.34■■■□□ 2.13
GFRA3-202ENST00000378362 GPTP24298 496 aa28.33■■■□□ 2.13
GFRA3-202ENST00000378362 CARMIL3Q8ND23 1372 aa28.33■■■□□ 2.13
GFRA3-202ENST00000378362 N4BP2Q86UW6 1770 aaPredicted RBP28.33■■■□□ 2.13
GFRA3-202ENST00000378362 TWISTNBQ3B726 338 aaPredicted RBP28.32■■■□□ 2.12
GFRA3-202ENST00000378362 PHAXQ9H814 394 aaKnown RBP28.32■■■□□ 2.12
GFRA3-202ENST00000378362 NUP98P52948 1817 aa28.32■■■□□ 2.12
GFRA3-202ENST00000378362 C10orf71Q711Q0 1435 aa28.32■■■□□ 2.12
GFRA3-202ENST00000378362 CDCA7LQ96GN5 454 aa28.32■■■□□ 2.12
GFRA3-202ENST00000378362 DBF4Q9UBU7 674 aaPredicted RBP28.32■■■□□ 2.12
GFRA3-202ENST00000378362 ZNF652Q9Y2D9 606 aa28.32■■■□□ 2.12
GFRA3-202ENST00000378362 DPEP1P16444 411 aa28.31■■■□□ 2.12
GFRA3-202ENST00000378362 CHRNA5P30532 468 aa28.31■■■□□ 2.12
GFRA3-202ENST00000378362 GPR162Q16538 588 aa28.31■■■□□ 2.12
GFRA3-202ENST00000378362 CLEC4GQ6UXB4 293 aa28.31■■■□□ 2.12
GFRA3-202ENST00000378362 GOLGA2Q08379 1002 aa28.3■■■□□ 2.12
GFRA3-202ENST00000378362 YBX3P16989 372 aaKnown RBP eCLIP28.29■■■□□ 2.12
GFRA3-202ENST00000378362 NPHP1O15259 732 aa28.29■■■□□ 2.12
GFRA3-202ENST00000378362 PRR5LQ6MZQ0 368 aa28.29■■■□□ 2.12
GFRA3-202ENST00000378362 ERVV-1B6SEH8 477 aa28.28■■■□□ 2.12
GFRA3-202ENST00000378362 PXDNLA1KZ92 1463 aa28.27■■■□□ 2.12
GFRA3-202ENST00000378362 NBPF5PQ86XG9 351 aaPredicted RBP28.27■■■□□ 2.12
GFRA3-202ENST00000378362 KIF13BQ9NQT8 1826 aa28.27■■■□□ 2.12
GFRA3-202ENST00000378362 MYH16Q9H6N6 1097 aa28.26■■■□□ 2.11
GFRA3-202ENST00000378362 UBN2Q6ZU65 1347 aa28.26■■■□□ 2.11
GFRA3-202ENST00000378362 CCDC30Q5VVM6 783 aa28.25■■■□□ 2.11
GFRA3-202ENST00000378362 GIGYF2Q6Y7W6 1299 aaKnown RBP28.25■■■□□ 2.11
GFRA3-202ENST00000378362 CNBD1Q8NA66 436 aa28.25■■■□□ 2.11
GFRA3-202ENST00000378362 KCNA3P22001 575 aa28.25■■■□□ 2.11
GFRA3-202ENST00000378362 HYPKQ9NX55 129 aa28.25■■■□□ 2.11
GFRA3-202ENST00000378362 KIAA1551Q9HCM1 1747 aa28.24■■■□□ 2.11
GFRA3-202ENST00000378362 NRXN2Q9P2S2 1712 aa28.24■■■□□ 2.11
GFRA3-202ENST00000378362 DCAF8L1A6NGE4 600 aa28.24■■■□□ 2.11
GFRA3-202ENST00000378362 VAMP4O75379 141 aa28.24■■■□□ 2.11
GFRA3-202ENST00000378362 NUTM1Q86Y26 1132 aa28.24■■■□□ 2.11
GFRA3-202ENST00000378362 TGFB2P61812 414 aa28.23■■■□□ 2.11
GFRA3-202ENST00000378362 ANKRD13DQ6ZTN6 518 aa28.22■■■□□ 2.11
GFRA3-202ENST00000378362 G2E3Q7L622 706 aa28.22■■■□□ 2.11
GFRA3-202ENST00000378362 SUSD4Q5VX71 490 aa28.22■■■□□ 2.11
GFRA3-202ENST00000378362 SLC4A2P04920 1241 aa28.21■■■□□ 2.11
GFRA3-202ENST00000378362 ZNF34Q8IZ26 560 aa28.21■■■□□ 2.11
GFRA3-202ENST00000378362 HNRNPUQ00839 825 aaKnown RBP eCLIP28.2■■■□□ 2.11
GFRA3-202ENST00000378362 BCS1LQ9Y276 419 aa28.2■■■□□ 2.11
GFRA3-202ENST00000378362 ANKRD31Q8N7Z5 1873 aa28.2■■■□□ 2.1
GFRA3-202ENST00000378362 ATP5J2-PTCD1G3V325 749 aa28.2■■■□□ 2.1
GFRA3-202ENST00000378362 SLFN5Q08AF3 891 aa28.2■■■□□ 2.1
GFRA3-202ENST00000378362 GTF2E1P29083 439 aaPredicted RBP28.19■■■□□ 2.1
GFRA3-202ENST00000378362 C2CD5Q86YS7 1000 aa28.19■■■□□ 2.1
GFRA3-202ENST00000378362 STK31Q9BXU1 1019 aa28.19■■■□□ 2.1
GFRA3-202ENST00000378362 TPTE2Q6XPS3 522 aa28.18■■■□□ 2.1
GFRA3-202ENST00000378362 PLBD2Q8NHP8 589 aa28.18■■■□□ 2.1
GFRA3-202ENST00000378362 ERFEQ4G0M1 354 aa28.18■■■□□ 2.1
GFRA3-202ENST00000378362 RIC3Q7Z5B4 369 aa28.18■■■□□ 2.1
GFRA3-202ENST00000378362 SYNE4Q8N205 404 aa28.18■■■□□ 2.1
GFRA3-202ENST00000378362 ATP10DQ9P241 1426 aa28.17■■■□□ 2.1
GFRA3-202ENST00000378362 E9PSI1 815 aa28.17■■■□□ 2.1
GFRA3-202ENST00000378362 ST5P78524 1137 aa28.17■■■□□ 2.1
GFRA3-202ENST00000378362 TCIRG1Q13488 830 aa28.16■■■□□ 2.1
GFRA3-202ENST00000378362 BRIP1Q9BX63 1249 aa28.16■■■□□ 2.1
GFRA3-202ENST00000378362 RGL2O15211 777 aa28.15■■■□□ 2.1
GFRA3-202ENST00000378362 ABCC12Q96J65 1359 aa28.15■■■□□ 2.1
GFRA3-202ENST00000378362 PIM2Q9P1W9 311 aa28.15■■■□□ 2.1
GFRA3-202ENST00000378362 H0YIN7 160 aa28.14■■■□□ 2.1
GFRA3-202ENST00000378362 ZNF622Q969S3 477 aaKnown RBP eCLIP28.14■■■□□ 2.1
GFRA3-202ENST00000378362 RTL5Q5HYW3 569 aaPredicted RBP28.13■■■□□ 2.09
GFRA3-202ENST00000378362 NLRP10Q86W26 655 aa28.13■■■□□ 2.09
GFRA3-202ENST00000378362 NTSR2O95665 410 aa28.13■■■□□ 2.09
GFRA3-202ENST00000378362 BRCA1P38398 1863 aaKnown RBP28.12■■■□□ 2.09
GFRA3-202ENST00000378362 PI4KAP2A4QPH2 592 aa28.12■■■□□ 2.09
GFRA3-202ENST00000378362 PI4KAP1Q8N8J0 262 aa28.12■■■□□ 2.09
GFRA3-202ENST00000378362 MYD88Q99836 296 aa28.12■■■□□ 2.09
GFRA3-202ENST00000378362 ZNF219Q9P2Y4 722 aaPredicted RBP28.12■■■□□ 2.09
GFRA3-202ENST00000378362 MAP3K2Q9Y2U5 619 aa28.12■■■□□ 2.09
GFRA3-202ENST00000378362 PDE6BP35913 854 aa28.11■■■□□ 2.09
GFRA3-202ENST00000378362 ARFGEF2Q9Y6D5 1785 aa28.11■■■□□ 2.09
GFRA3-202ENST00000378362 DALRD3Q5D0E6 543 aaKnown RBP28.11■■■□□ 2.09
GFRA3-202ENST00000378362 C3orf67Q6ZVT6 689 aa28.11■■■□□ 2.09
GFRA3-202ENST00000378362 COL11A2P13942 1736 aaPredicted RBP28.1■■■□□ 2.09
GFRA3-202ENST00000378362 HSP90AB3PQ58FF7 597 aa28.1■■■□□ 2.09
GFRA3-202ENST00000378362 JARID2Q92833 1246 aaPredicted RBP28.1■■■□□ 2.09
GFRA3-202ENST00000378362 UTP14AQ9BVJ6 771 aaKnown RBP28.1■■■□□ 2.09
GFRA3-202ENST00000378362 NYXQ9GZU5 481 aa28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms