RNA–Protein interactions for RNA: ENST00000378206.5

DFFB-204, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-204ENST00000378206 USP48Q86UV5 1035 aa18.22■□□□□ 0.51
DFFB-204ENST00000378206 DIAPH3Q9NSV4 1193 aa18.22■□□□□ 0.51
DFFB-204ENST00000378206 SASH1O94885 1247 aa18.21■□□□□ 0.51
DFFB-204ENST00000378206 IFIT2P09913 472 aaKnown RBP18.21■□□□□ 0.51
DFFB-204ENST00000378206 BOLA2Q9H3K6 86 aa18.21■□□□□ 0.51
DFFB-204ENST00000378206 TAF6LQ9Y6J9 622 aa18.21■□□□□ 0.51
DFFB-204ENST00000378206 MARF1Q9Y4F3 1742 aaKnown RBP18.21■□□□□ 0.51
DFFB-204ENST00000378206 ANP32BQ92688 251 aaKnown RBP18.21■□□□□ 0.51
DFFB-204ENST00000378206 RAD50Q92878 1312 aa18.21■□□□□ 0.5
DFFB-204ENST00000378206 CHRNA2Q15822 529 aa18.2■□□□□ 0.5
DFFB-204ENST00000378206 NECAB1Q8N987 351 aa18.2■□□□□ 0.5
DFFB-204ENST00000378206 CNPY2Q9Y2B0 182 aa18.2■□□□□ 0.5
DFFB-204ENST00000378206 FAM208AQ9UK61 1670 aaKnown RBP18.2■□□□□ 0.5
DFFB-204ENST00000378206 MCM2P49736 904 aa18.2■□□□□ 0.5
DFFB-204ENST00000378206 EPHA10Q5JZY3 1008 aa18.2■□□□□ 0.5
DFFB-204ENST00000378206 RGPD2P0DJD1 1756 aa18.19■□□□□ 0.5
DFFB-204ENST00000378206 IGKV5-2P06315 115 aa18.19■□□□□ 0.5
DFFB-204ENST00000378206 CCDC173Q0VFZ6 552 aa18.19■□□□□ 0.5
DFFB-204ENST00000378206 PDIA6Q15084 440 aa18.19■□□□□ 0.5
DFFB-204ENST00000378206 RIC3Q7Z5B4 369 aa18.19■□□□□ 0.5
DFFB-204ENST00000378206 CCDC83Q8IWF9 413 aa18.19■□□□□ 0.5
DFFB-204ENST00000378206 JAKMIP1Q96N16 626 aaKnown RBP18.19■□□□□ 0.5
DFFB-204ENST00000378206 PROSER2Q86WR7 435 aaPredicted RBP18.19■□□□□ 0.5
DFFB-204ENST00000378206 PPP1R9BQ96SB3 815 aa18.19■□□□□ 0.5
DFFB-204ENST00000378206 ECHDC1Q9NTX5 307 aa18.19■□□□□ 0.5
DFFB-204ENST00000378206 USP16Q9Y5T5 823 aa18.18■□□□□ 0.5
DFFB-204ENST00000378206 GRM8O00222 908 aa18.18■□□□□ 0.5
DFFB-204ENST00000378206 GLRX3O76003 335 aaKnown RBP18.18■□□□□ 0.5
DFFB-204ENST00000378206 AMOTQ4VCS5 1084 aa18.18■□□□□ 0.5
DFFB-204ENST00000378206 COPS6Q7L5N1 327 aa18.18■□□□□ 0.5
DFFB-204ENST00000378206 TTC14Q96N46 770 aa18.18■□□□□ 0.5
DFFB-204ENST00000378206 INTS4Q96HW7 963 aaKnown RBP18.18■□□□□ 0.5
DFFB-204ENST00000378206 SYT1P21579 422 aa18.17■□□□□ 0.5
DFFB-204ENST00000378206 LRRC37A3O60309 1634 aa18.17■□□□□ 0.5
DFFB-204ENST00000378206 ATP5J2-PTCD1G3V325 749 aa18.17■□□□□ 0.5
DFFB-204ENST00000378206 PTCD1O75127 700 aaKnown RBP18.17■□□□□ 0.5
DFFB-204ENST00000378206 LRSAM1Q6UWE0 723 aa18.17■□□□□ 0.5
DFFB-204ENST00000378206 XAGE3Q8WTP9 111 aa18.17■□□□□ 0.5
DFFB-204ENST00000378206 HOXB7P09629 217 aa18.16■□□□□ 0.5
DFFB-204ENST00000378206 ZNF496Q96IT1 587 aaPredicted RBP18.16■□□□□ 0.5
DFFB-204ENST00000378206 MYD88Q99836 296 aa18.16■□□□□ 0.5
DFFB-204ENST00000378206 AOX1Q06278 1338 aa18.16■□□□□ 0.5
DFFB-204ENST00000378206 KCNJ4P48050 445 aa18.16■□□□□ 0.5
DFFB-204ENST00000378206 ZNF790Q6PG37 636 aa18.16■□□□□ 0.5
DFFB-204ENST00000378206 FER1L4A9Z1Z3 1794 aa18.15■□□□□ 0.5
DFFB-204ENST00000378206 NFAT5O94916 1531 aa18.15■□□□□ 0.5
DFFB-204ENST00000378206 FIBPO43427 364 aa18.15■□□□□ 0.5
DFFB-204ENST00000378206 G3BP1Q13283 466 aaKnown RBP eCLIP18.15■□□□□ 0.5
DFFB-204ENST00000378206 FAM173BQ6P4H8 233 aa18.15■□□□□ 0.5
DFFB-204ENST00000378206 LTN1O94822 1766 aa18.15■□□□□ 0.5
DFFB-204ENST00000378206 NMIQ13287 307 aaPredicted RBP18.15■□□□□ 0.5
DFFB-204ENST00000378206 HYPKQ9NX55 129 aa18.15■□□□□ 0.5
DFFB-204ENST00000378206 LIMCH1Q9UPQ0 1083 aa18.15■□□□□ 0.5
DFFB-204ENST00000378206 CHMP3Q9Y3E7 222 aa18.15■□□□□ 0.5
DFFB-204ENST00000378206 CSB-PGBD3P0DP91 1061 aa18.14■□□□□ 0.5
DFFB-204ENST00000378206 HSP90AB4PQ58FF6 505 aa18.14■□□□□ 0.5
DFFB-204ENST00000378206 LINS1Q8NG48 757 aa18.14■□□□□ 0.5
DFFB-204ENST00000378206 RPAP1Q9BWH6 1393 aaPredicted RBP18.14■□□□□ 0.49
DFFB-204ENST00000378206 A0A0D9SFI3 127 aa18.13■□□□□ 0.49
DFFB-204ENST00000378206 SLFNL1Q499Z3 407 aa18.13■□□□□ 0.49
DFFB-204ENST00000378206 FERMT3Q86UX7 667 aa18.13■□□□□ 0.49
DFFB-204ENST00000378206 RAPGEF4Q8WZA2 1011 aa18.13■□□□□ 0.49
DFFB-204ENST00000378206 DDX21Q9NR30 783 aaKnown RBP eCLIP18.13■□□□□ 0.49
DFFB-204ENST00000378206 PDRG1Q9NUG6 133 aa18.13■□□□□ 0.49
DFFB-204ENST00000378206 SMC3Q9UQE7 1217 aa18.13■□□□□ 0.49
DFFB-204ENST00000378206 STX6O43752 255 aa18.13■□□□□ 0.49
DFFB-204ENST00000378206 MTX1Q13505 466 aa18.13■□□□□ 0.49
DFFB-204ENST00000378206 ME3Q16798 604 aa18.13■□□□□ 0.49
DFFB-204ENST00000378206 ZSCAN30Q86W11 494 aa18.13■□□□□ 0.49
DFFB-204ENST00000378206 RBM8AQ9Y5S9 174 aaKnown RBP18.13■□□□□ 0.49
DFFB-204ENST00000378206 ALDH1L1O75891 902 aa18.12■□□□□ 0.49
DFFB-204ENST00000378206 GJB2P29033 226 aa18.12■□□□□ 0.49
DFFB-204ENST00000378206 ST3GAL1Q11201 340 aa18.12■□□□□ 0.49
DFFB-204ENST00000378206 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.12■□□□□ 0.49
DFFB-204ENST00000378206 WDR33Q9C0J8 1336 aaKnown RBP18.12■□□□□ 0.49
DFFB-204ENST00000378206 TCHHQ07283 1943 aa18.12■□□□□ 0.49
DFFB-204ENST00000378206 PXDNLA1KZ92 1463 aa18.12■□□□□ 0.49
DFFB-204ENST00000378206 ZNF589Q86UQ0 364 aaPredicted RBP18.12■□□□□ 0.49
DFFB-204ENST00000378206 VPS37CA5D8V6 355 aaPredicted RBP18.11■□□□□ 0.49
DFFB-204ENST00000378206 DNM1Q05193 864 aaKnown RBP18.11■□□□□ 0.49
DFFB-204ENST00000378206 STK3Q13188 491 aa18.11■□□□□ 0.49
DFFB-204ENST00000378206 ERBB3P21860 1342 aa18.11■□□□□ 0.49
DFFB-204ENST00000378206 TTC41PQ6P2S7 1318 aa18.11■□□□□ 0.49
DFFB-204ENST00000378206 ZSCAN22P10073 491 aaPredicted RBP18.11■□□□□ 0.49
DFFB-204ENST00000378206 FSD1Q9BTV5 496 aa18.11■□□□□ 0.49
DFFB-204ENST00000378206 MSNP26038 577 aaKnown RBP18.1■□□□□ 0.49
DFFB-204ENST00000378206 TPCN1Q9ULQ1 816 aa18.1■□□□□ 0.49
DFFB-204ENST00000378206 ADGRL3Q9HAR2 1447 aa18.1■□□□□ 0.49
DFFB-204ENST00000378206 NEURL1BA8MQ27 555 aa18.1■□□□□ 0.49
DFFB-204ENST00000378206 PPFIA3O75145 1194 aa18.1■□□□□ 0.49
DFFB-204ENST00000378206 MBD3O95983 291 aa18.1■□□□□ 0.49
DFFB-204ENST00000378206 NECTIN1Q15223 517 aa18.1■□□□□ 0.49
DFFB-204ENST00000378206 UBE3BQ7Z3V4 1068 aa18.1■□□□□ 0.49
DFFB-204ENST00000378206 ZNF830Q96NB3 372 aaPredicted RBP18.1■□□□□ 0.49
DFFB-204ENST00000378206 SEC62Q99442 399 aaKnown RBP18.1■□□□□ 0.49
DFFB-204ENST00000378206 CREB3L3Q68CJ9 461 aa18.09■□□□□ 0.49
DFFB-204ENST00000378206 EVI5LQ96CN4 794 aa18.09■□□□□ 0.49
DFFB-204ENST00000378206 SLC52A2Q9HAB3 445 aa18.09■□□□□ 0.49
DFFB-204ENST00000378206 GCKRQ14397 625 aa18.09■□□□□ 0.49
DFFB-204ENST00000378206 CCDC129Q6ZRS4 1044 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms