RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 EMILIN1Q9Y6C2 1016 aa9.9□□□□□ -0.83
VPS36-201ENST00000378060 ZNF530Q6P9A1 599 aaPredicted RBP9.89□□□□□ -0.83
VPS36-201ENST00000378060 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.89□□□□□ -0.834e-6■■□□□ 13.6
VPS36-201ENST00000378060 TXLNAP40222 546 aa9.89□□□□□ -0.83
VPS36-201ENST00000378060 PKNOX2Q96KN3 472 aa9.89□□□□□ -0.83
VPS36-201ENST00000378060 EXOC6BQ9Y2D4 811 aa9.89□□□□□ -0.83
VPS36-201ENST00000378060 ANKRD26Q9UPS8 1709 aa9.89□□□□□ -0.83
VPS36-201ENST00000378060 CEBPZQ03701 1054 aaKnown RBP9.89□□□□□ -0.83
VPS36-201ENST00000378060 KLHL40Q2TBA0 621 aa9.89□□□□□ -0.83
VPS36-201ENST00000378060 AACSQ86V21 672 aa9.89□□□□□ -0.83
VPS36-201ENST00000378060 IL1RAPL2Q9NP60 686 aa9.89□□□□□ -0.83
VPS36-201ENST00000378060 CWC27Q6UX04 472 aaKnown RBP9.89□□□□□ -0.83
VPS36-201ENST00000378060 TRIM22Q8IYM9 498 aa9.89□□□□□ -0.83
VPS36-201ENST00000378060 MAP2P11137 1827 aaKnown RBP9.89□□□□□ -0.83
VPS36-201ENST00000378060 NHSL1Q5SYE7 1610 aa9.88□□□□□ -0.83
VPS36-201ENST00000378060 OFD1O75665 1012 aa9.88□□□□□ -0.83
VPS36-201ENST00000378060 IGHDP01880 384 aa9.88□□□□□ -0.83
VPS36-201ENST00000378060 ARHGAP45Q92619 1136 aa9.88□□□□□ -0.83
VPS36-201ENST00000378060 NPHP3Q7Z494 1330 aa9.88□□□□□ -0.83
VPS36-201ENST00000378060 SMTNL1A8MU46 457 aa9.88□□□□□ -0.83
VPS36-201ENST00000378060 TOM1O60784 492 aa9.88□□□□□ -0.83
VPS36-201ENST00000378060 CDKL5O76039 1030 aa9.88□□□□□ -0.83
VPS36-201ENST00000378060 SSFA2P28290 1259 aa9.88□□□□□ -0.83
VPS36-201ENST00000378060 NAP1L1P55209 391 aaKnown RBP9.88□□□□□ -0.83
VPS36-201ENST00000378060 PHLPP1O60346 1717 aa9.88□□□□□ -0.83
VPS36-201ENST00000378060 TATP17735 454 aaPredicted RBP9.88□□□□□ -0.83
VPS36-201ENST00000378060 PDCL3Q9H2J4 239 aa9.88□□□□□ -0.83
VPS36-201ENST00000378060 ALS2Q96Q42 1657 aa9.88□□□□□ -0.83
VPS36-201ENST00000378060 PTPRCP08575 1304 aa9.88□□□□□ -0.83
VPS36-201ENST00000378060 STK3Q13188 491 aa9.87□□□□□ -0.83
VPS36-201ENST00000378060 ZSCAN25Q6NSZ9 544 aa9.87□□□□□ -0.83
VPS36-201ENST00000378060 CAGE1Q8TC20 777 aa9.87□□□□□ -0.83
VPS36-201ENST00000378060 UPF3BQ9BZI7 483 aaKnown RBP9.87□□□□□ -0.83
VPS36-201ENST00000378060 ERLIN1O75477 346 aa9.87□□□□□ -0.83
VPS36-201ENST00000378060 PPFIBP1Q86W92 1011 aa9.87□□□□□ -0.83
VPS36-201ENST00000378060 OVOS2A0A0J9YW53 1432 aa9.87□□□□□ -0.83
VPS36-201ENST00000378060 OVOS2Q6IE36 1432 aa9.87□□□□□ -0.83
VPS36-201ENST00000378060 MED1Q15648 1581 aaPredicted RBP9.87□□□□□ -0.83
VPS36-201ENST00000378060 GNAT3A8MTJ3 354 aa9.87□□□□□ -0.83
VPS36-201ENST00000378060 CASTP20810 708 aaKnown RBP9.87□□□□□ -0.83
VPS36-201ENST00000378060 ZC3H6P61129 1189 aaKnown RBP9.87□□□□□ -0.83
VPS36-201ENST00000378060 LEKR1Q6ZMV7 388 aa9.87□□□□□ -0.83
VPS36-201ENST00000378060 BAG4O95429 457 aaKnown RBP9.87□□□□□ -0.83
VPS36-201ENST00000378060 PDE4CQ08493 712 aa9.87□□□□□ -0.83
VPS36-201ENST00000378060 TBC1D9Q6ZT07 1266 aa9.87□□□□□ -0.83
VPS36-201ENST00000378060 MPNDQ8N594 471 aa9.87□□□□□ -0.83
VPS36-201ENST00000378060 THUMPD2Q9BTF0 503 aaKnown RBP9.87□□□□□ -0.83
VPS36-201ENST00000378060 ZNHIT6Q9NWK9 470 aaKnown RBP9.87□□□□□ -0.83
VPS36-201ENST00000378060 LIMCH1Q9UPQ0 1083 aa9.87□□□□□ -0.83
VPS36-201ENST00000378060 ATP2B1P20020 1258 aa9.86□□□□□ -0.83
VPS36-201ENST00000378060 NACAP1Q9BZK3 213 aa9.86□□□□□ -0.83
VPS36-201ENST00000378060 MAGEC2Q9UBF1 373 aaPredicted RBP9.86□□□□□ -0.83
VPS36-201ENST00000378060 TTC39AQ5SRH9 613 aa9.86□□□□□ -0.83
VPS36-201ENST00000378060 FILIP1Q7Z7B0 1213 aa9.86□□□□□ -0.83
VPS36-201ENST00000378060 PEAK1Q9H792 1746 aa9.86□□□□□ -0.83
VPS36-201ENST00000378060 EIF3JO75822 258 aaKnown RBP9.86□□□□□ -0.83
VPS36-201ENST00000378060 SLC3A2P08195 630 aaKnown RBP9.86□□□□□ -0.83
VPS36-201ENST00000378060 UVSSAQ2YD98 709 aa9.86□□□□□ -0.83
VPS36-201ENST00000378060 TNS3Q68CZ2 1445 aa9.86□□□□□ -0.83
VPS36-201ENST00000378060 MAP4K4O95819 1239 aaPredicted RBP9.85□□□□□ -0.83
VPS36-201ENST00000378060 CLCN1P35523 988 aa9.85□□□□□ -0.83
VPS36-201ENST00000378060 TRIM34Q9BYJ4 488 aa9.85□□□□□ -0.83
VPS36-201ENST00000378060 CEP126Q9P2H0 1117 aa9.85□□□□□ -0.83
VPS36-201ENST00000378060 SOS2Q07890 1332 aaPredicted RBP9.85□□□□□ -0.83
VPS36-201ENST00000378060 SPATA31A3Q5VYP0 1347 aa9.85□□□□□ -0.83
VPS36-201ENST00000378060 CTAGE5O15320 804 aa9.85□□□□□ -0.83
VPS36-201ENST00000378060 DCTN1Q14203 1278 aa9.85□□□□□ -0.83
VPS36-201ENST00000378060 SNX21Q969T3 373 aa9.85□□□□□ -0.83
VPS36-201ENST00000378060 SIL1Q9H173 461 aa9.85□□□□□ -0.83
VPS36-201ENST00000378060 CAVIN2O95810 425 aa9.85□□□□□ -0.83
VPS36-201ENST00000378060 CHRNA2Q15822 529 aa9.85□□□□□ -0.83
VPS36-201ENST00000378060 KIF6Q6ZMV9 814 aa9.85□□□□□ -0.83
VPS36-201ENST00000378060 SYTL4Q96C24 671 aaPredicted RBP9.85□□□□□ -0.83
VPS36-201ENST00000378060 MYO6Q9UM54 1294 aa9.85□□□□□ -0.83
VPS36-201ENST00000378060 LTN1O94822 1766 aa9.85□□□□□ -0.83
VPS36-201ENST00000378060 NEMFO60524 1076 aa9.85□□□□□ -0.83
VPS36-201ENST00000378060 STIM1Q13586 685 aa9.85□□□□□ -0.83
VPS36-201ENST00000378060 TXLNBQ8N3L3 684 aa9.85□□□□□ -0.83
VPS36-201ENST00000378060 LUC7LQ9NQ29 371 aaKnown RBP9.85□□□□□ -0.83
VPS36-201ENST00000378060 ANO10Q9NW15 660 aa9.85□□□□□ -0.83
VPS36-201ENST00000378060 POLKQ9UBT6 870 aa9.85□□□□□ -0.83
VPS36-201ENST00000378060 COL16A1Q07092 1604 aaPredicted RBP9.84□□□□□ -0.83
VPS36-201ENST00000378060 TTC21AQ8NDW8 1320 aa9.84□□□□□ -0.83
VPS36-201ENST00000378060 NUCB1Q02818 461 aa9.84□□□□□ -0.83
VPS36-201ENST00000378060 UBXN4Q92575 508 aa9.84□□□□□ -0.83
VPS36-201ENST00000378060 SPG7Q9UQ90 795 aa9.84□□□□□ -0.83
VPS36-201ENST00000378060 HSPA1LP34931 641 aa9.84□□□□□ -0.83
VPS36-201ENST00000378060 C8orf34Q49A92 452 aa9.84□□□□□ -0.83
VPS36-201ENST00000378060 TAF3Q5VWG9 929 aa9.84□□□□□ -0.83
VPS36-201ENST00000378060 NUTM1Q86Y26 1132 aa9.84□□□□□ -0.83
VPS36-201ENST00000378060 CCDC83Q8IWF9 413 aa9.84□□□□□ -0.83
VPS36-201ENST00000378060 DDX19AQ9NUU7 478 aaKnown RBP9.84□□□□□ -0.83
VPS36-201ENST00000378060 EP400Q96L91 3159 aa9.84□□□□□ -0.83
VPS36-201ENST00000378060 NUTM2BA6NNL0 878 aaPredicted RBP9.84□□□□□ -0.83
VPS36-201ENST00000378060 NUTM2EB1AL46 878 aaPredicted RBP9.84□□□□□ -0.83
VPS36-201ENST00000378060 SMARCA5O60264 1052 aaPredicted RBP9.84□□□□□ -0.83
VPS36-201ENST00000378060 EPS15P42566 896 aa9.84□□□□□ -0.83
VPS36-201ENST00000378060 TAF7Q15545 349 aaPredicted RBP9.84□□□□□ -0.83
VPS36-201ENST00000378060 PTPN14Q15678 1187 aa9.84□□□□□ -0.83
VPS36-201ENST00000378060 NUTM2AQ8IVF1 878 aaPredicted RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms