RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 MMP10P09238 476 aa17.05■□□□□ 0.32
CKAP2-202ENST00000378034 TM4SF1P30408 202 aa17.05■□□□□ 0.32
CKAP2-202ENST00000378034 ZBED9Q6R2W3 1325 aa17.05■□□□□ 0.32
CKAP2-202ENST00000378034 MAP3K15Q6ZN16 1313 aa17.05■□□□□ 0.32
CKAP2-202ENST00000378034 CDCA7LQ96GN5 454 aa17.04■□□□□ 0.32
CKAP2-202ENST00000378034 STK31Q9BXU1 1019 aa17.04■□□□□ 0.32
CKAP2-202ENST00000378034 ANXA1P04083 346 aa17.04■□□□□ 0.32
CKAP2-202ENST00000378034 PARP3Q9Y6F1 533 aa17.04■□□□□ 0.32
CKAP2-202ENST00000378034 CACNA1FO60840 1977 aa17.03■□□□□ 0.32
CKAP2-202ENST00000378034 TTLL7Q6ZT98 887 aa17.03■□□□□ 0.32
CKAP2-202ENST00000378034 COPS6Q7L5N1 327 aa17.03■□□□□ 0.32
CKAP2-202ENST00000378034 NFIXQ14938 502 aa17.02■□□□□ 0.32
CKAP2-202ENST00000378034 XAGE3Q8WTP9 111 aa17.02■□□□□ 0.32
CKAP2-202ENST00000378034 NUP98P52948 1817 aa17.02■□□□□ 0.31
CKAP2-202ENST00000378034 CT47B1P0C2W7 299 aaPredicted RBP17.01■□□□□ 0.31
CKAP2-202ENST00000378034 TBC1D9BQ66K14 1250 aa17.01■□□□□ 0.31
CKAP2-202ENST00000378034 ZNF428Q96B54 188 aa17.01■□□□□ 0.31
CKAP2-202ENST00000378034 POLRMTO00411 1230 aaKnown RBP17■□□□□ 0.31
CKAP2-202ENST00000378034 DDR1Q08345 913 aa17■□□□□ 0.31
CKAP2-202ENST00000378034 AIMP1Q12904 312 aaKnown RBP17■□□□□ 0.31
CKAP2-202ENST00000378034 GIGYF2Q6Y7W6 1299 aaKnown RBP17■□□□□ 0.31
CKAP2-202ENST00000378034 SETDB2Q96T68 719 aa17■□□□□ 0.31
CKAP2-202ENST00000378034 HLFQ16534 295 aa17■□□□□ 0.31
CKAP2-202ENST00000378034 PLBD2Q8NHP8 589 aa17■□□□□ 0.31
CKAP2-202ENST00000378034 ZBTB3Q9H5J0 574 aa17■□□□□ 0.31
CKAP2-202ENST00000378034 CARMIL3Q8ND23 1372 aa16.99■□□□□ 0.31
CKAP2-202ENST00000378034 ATP10DQ9P241 1426 aa16.99■□□□□ 0.31
CKAP2-202ENST00000378034 NRXN2Q9P2S2 1712 aa16.99■□□□□ 0.31
CKAP2-202ENST00000378034 ANKRD13DQ6ZTN6 518 aa16.99■□□□□ 0.31
CKAP2-202ENST00000378034 CD2APQ9Y5K6 639 aa16.99■□□□□ 0.31
CKAP2-202ENST00000378034 DDX58O95786 925 aaKnown RBP16.98■□□□□ 0.31
CKAP2-202ENST00000378034 SLC4A2P04920 1241 aa16.98■□□□□ 0.31
CKAP2-202ENST00000378034 HSP90AB3PQ58FF7 597 aa16.98■□□□□ 0.31
CKAP2-202ENST00000378034 SERPINB2P05120 415 aa16.98■□□□□ 0.31
CKAP2-202ENST00000378034 BICDL1Q6ZP65 573 aa16.98■□□□□ 0.31
CKAP2-202ENST00000378034 FHDC1Q9C0D6 1143 aaPredicted RBP16.98■□□□□ 0.31
CKAP2-202ENST00000378034 PHAXQ9H814 394 aaKnown RBP16.98■□□□□ 0.31
CKAP2-202ENST00000378034 NIP7Q9Y221 180 aaKnown RBP eCLIP16.98■□□□□ 0.31
CKAP2-202ENST00000378034 AFDNP55196 1824 aaKnown RBP16.97■□□□□ 0.31
CKAP2-202ENST00000378034 KIF13BQ9NQT8 1826 aa16.97■□□□□ 0.31
CKAP2-202ENST00000378034 SYT17Q9BSW7 474 aa16.97■□□□□ 0.31
CKAP2-202ENST00000378034 ANKRD36CQ5JPF3 1778 aa16.96■□□□□ 0.31
CKAP2-202ENST00000378034 TCERG1O14776 1098 aaKnown RBP16.96■□□□□ 0.31
CKAP2-202ENST00000378034 ZNF34Q8IZ26 560 aa16.96■□□□□ 0.31
CKAP2-202ENST00000378034 C10orf71Q711Q0 1435 aa16.96■□□□□ 0.31
CKAP2-202ENST00000378034 TCIRG1Q13488 830 aa16.95■□□□□ 0.3
CKAP2-202ENST00000378034 PARP10Q53GL7 1025 aa16.95■□□□□ 0.3
CKAP2-202ENST00000378034 ARFGEF2Q9Y6D5 1785 aa16.95■□□□□ 0.3
CKAP2-202ENST00000378034 ALDH1L2Q3SY69 923 aa16.95■□□□□ 0.3
CKAP2-202ENST00000378034 RIC3Q7Z5B4 369 aa16.95■□□□□ 0.3
CKAP2-202ENST00000378034 IBTKQ9P2D0 1353 aaPredicted RBP16.94■□□□□ 0.3
CKAP2-202ENST00000378034 FLIIQ13045 1269 aa16.94■□□□□ 0.3
CKAP2-202ENST00000378034 TPTE2Q6XPS3 522 aa16.94■□□□□ 0.3
CKAP2-202ENST00000378034 KLHL34Q8N239 644 aa16.94■□□□□ 0.3
CKAP2-202ENST00000378034 NYXQ9GZU5 481 aa16.94■□□□□ 0.3
CKAP2-202ENST00000378034 KSR2Q6VAB6 950 aa16.93■□□□□ 0.3
CKAP2-202ENST00000378034 NBPF5PQ86XG9 351 aaPredicted RBP16.93■□□□□ 0.3
CKAP2-202ENST00000378034 TGFB2P61812 414 aa16.93■□□□□ 0.3
CKAP2-202ENST00000378034 G2E3Q7L622 706 aa16.93■□□□□ 0.3
CKAP2-202ENST00000378034 PPP1R42Q7Z4L9 355 aa16.93■□□□□ 0.3
CKAP2-202ENST00000378034 CNBD1Q8NA66 436 aa16.93■□□□□ 0.3
CKAP2-202ENST00000378034 GPTP24298 496 aa16.92■□□□□ 0.3
CKAP2-202ENST00000378034 TRIM28Q13263 835 aaKnown RBP16.92■□□□□ 0.3
CKAP2-202ENST00000378034 PRR5LQ6MZQ0 368 aa16.92■□□□□ 0.3
CKAP2-202ENST00000378034 SRCAPQ6ZRS2 3230 aa16.92■□□□□ 0.3
CKAP2-202ENST00000378034 RNF123Q5XPI4 1314 aa16.92■□□□□ 0.3
CKAP2-202ENST00000378034 UBN2Q6ZU65 1347 aa16.92■□□□□ 0.3
CKAP2-202ENST00000378034 NPHP1O15259 732 aa16.91■□□□□ 0.3
CKAP2-202ENST00000378034 ST5P78524 1137 aa16.91■□□□□ 0.3
CKAP2-202ENST00000378034 ISCA1Q9BUE6 129 aa16.91■□□□□ 0.3
CKAP2-202ENST00000378034 PI4KAP2A4QPH2 592 aa16.91■□□□□ 0.3
CKAP2-202ENST00000378034 FKBP5Q13451 457 aaPredicted RBP16.91■□□□□ 0.3
CKAP2-202ENST00000378034 MRPL50Q8N5N7 158 aaKnown RBP16.91■□□□□ 0.3
CKAP2-202ENST00000378034 PI4KAP1Q8N8J0 262 aa16.91■□□□□ 0.3
CKAP2-202ENST00000378034 SSH1Q8WYL5 1049 aa16.91■□□□□ 0.3
CKAP2-202ENST00000378034 METTL22Q9BUU2 404 aaPredicted RBP16.91■□□□□ 0.3
CKAP2-202ENST00000378034 BRIP1Q9BX63 1249 aa16.91■□□□□ 0.3
CKAP2-202ENST00000378034 PDZRN3Q9UPQ7 1066 aa16.91■□□□□ 0.3
CKAP2-202ENST00000378034 SUSD4Q5VX71 490 aa16.9■□□□□ 0.3
CKAP2-202ENST00000378034 NLRP10Q86W26 655 aa16.9■□□□□ 0.3
CKAP2-202ENST00000378034 MAP3K2Q9Y2U5 619 aa16.9■□□□□ 0.3
CKAP2-202ENST00000378034 ADCY9O60503 1353 aa16.9■□□□□ 0.3
CKAP2-202ENST00000378034 BRPF1P55201 1214 aaPredicted RBP16.89■□□□□ 0.3
CKAP2-202ENST00000378034 GTF2E1P29083 439 aaPredicted RBP16.89■□□□□ 0.29
CKAP2-202ENST00000378034 PDE6BP35913 854 aa16.89■□□□□ 0.29
CKAP2-202ENST00000378034 NEXNQ0ZGT2 675 aa16.89■□□□□ 0.29
CKAP2-202ENST00000378034 NLGN2Q8NFZ4 835 aa16.89■□□□□ 0.29
CKAP2-202ENST00000378034 UTP14AQ9BVJ6 771 aaKnown RBP16.89■□□□□ 0.29
CKAP2-202ENST00000378034 KIAA1551Q9HCM1 1747 aa16.89■□□□□ 0.29
CKAP2-202ENST00000378034 PTPRCP08575 1304 aa16.88■□□□□ 0.29
CKAP2-202ENST00000378034 NTSR2O95665 410 aa16.88■□□□□ 0.29
CKAP2-202ENST00000378034 SMC4Q9NTJ3 1288 aa16.88■□□□□ 0.29
CKAP2-202ENST00000378034 FAM177BA6PVY3 158 aa16.88■□□□□ 0.29
CKAP2-202ENST00000378034 RARSP54136 660 aaKnown RBP16.88■□□□□ 0.29
CKAP2-202ENST00000378034 CCDC191Q8NCU4 936 aa16.88■□□□□ 0.29
CKAP2-202ENST00000378034 DNAAF4Q8WXU2 420 aa16.88■□□□□ 0.29
CKAP2-202ENST00000378034 MYD88Q99836 296 aa16.88■□□□□ 0.29
CKAP2-202ENST00000378034 PXDNLA1KZ92 1463 aa16.88■□□□□ 0.29
CKAP2-202ENST00000378034 ANKRD31Q8N7Z5 1873 aa16.87■□□□□ 0.29
CKAP2-202ENST00000378034 RIC1Q4ADV7 1423 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms