RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 ZFYVE16Q7Z3T8 1539 aa23.08■■□□□ 1.28
PCDH8-202ENST00000377942 MCM4P33991 863 aa23.08■■□□□ 1.28
PCDH8-202ENST00000377942 ODF2Q5BJF6 829 aa23.08■■□□□ 1.28
PCDH8-202ENST00000377942 TTC22Q5TAA0 569 aa23.08■■□□□ 1.28
PCDH8-202ENST00000377942 CCDC83Q8IWF9 413 aa23.08■■□□□ 1.28
PCDH8-202ENST00000377942 BABAM1Q9NWV8 329 aa23.08■■□□□ 1.28
PCDH8-202ENST00000377942 SIRT1Q96EB6 747 aa23.07■■□□□ 1.28
PCDH8-202ENST00000377942 MEIS3Q99687 375 aa23.07■■□□□ 1.28
PCDH8-202ENST00000377942 GOLIM4O00461 696 aa23.07■■□□□ 1.28
PCDH8-202ENST00000377942 DDX11Q96FC9 970 aa23.07■■□□□ 1.28
PCDH8-202ENST00000377942 CDCA7Q9BWT1 371 aaPredicted RBP23.07■■□□□ 1.28
PCDH8-202ENST00000377942 BCL11BQ9C0K0 894 aaPredicted RBP23.07■■□□□ 1.28
PCDH8-202ENST00000377942 MPHOSPH10O00566 681 aaKnown RBP23.06■■□□□ 1.28
PCDH8-202ENST00000377942 BAG3O95817 575 aa23.06■■□□□ 1.28
PCDH8-202ENST00000377942 ATP8B2P98198 1209 aa23.06■■□□□ 1.28
PCDH8-202ENST00000377942 HMG20BQ9P0W2 317 aa23.06■■□□□ 1.28
PCDH8-202ENST00000377942 NUP62CLQ9H1M0 184 aa23.06■■□□□ 1.28
PCDH8-202ENST00000377942 SBNO1A3KN83 1393 aa23.06■■□□□ 1.28
PCDH8-202ENST00000377942 PCDH11XQ9BZA7 1347 aa23.06■■□□□ 1.28
PCDH8-202ENST00000377942 PCDH11YQ9BZA8 1340 aa23.06■■□□□ 1.28
PCDH8-202ENST00000377942 TMEM2Q9UHN6 1383 aa23.05■■□□□ 1.28
PCDH8-202ENST00000377942 NUCB1Q02818 461 aa23.05■■□□□ 1.28
PCDH8-202ENST00000377942 CCDC173Q0VFZ6 552 aa23.05■■□□□ 1.28
PCDH8-202ENST00000377942 ZFYP08048 801 aaPredicted RBP23.05■■□□□ 1.28
PCDH8-202ENST00000377942 ZNF76P36508 570 aa23.05■■□□□ 1.28
PCDH8-202ENST00000377942 SETDB2Q96T68 719 aa23.05■■□□□ 1.28
PCDH8-202ENST00000377942 SCAND2PQ9GZW5 306 aaPredicted RBP23.05■■□□□ 1.28
PCDH8-202ENST00000377942 ZNHIT6Q9NWK9 470 aaKnown RBP23.05■■□□□ 1.28
PCDH8-202ENST00000377942 SLC12A7Q9Y666 1083 aa23.05■■□□□ 1.28
PCDH8-202ENST00000377942 SERPINC1P01008 464 aa23.04■■□□□ 1.28
PCDH8-202ENST00000377942 IL15P40933 162 aaPredicted RBP23.04■■□□□ 1.28
PCDH8-202ENST00000377942 CEP57L1Q8IYX8 460 aa23.04■■□□□ 1.28
PCDH8-202ENST00000377942 C8orf37Q96NL8 207 aa23.04■■□□□ 1.28
PCDH8-202ENST00000377942 RANBP6O60518 1105 aaKnown RBP23.04■■□□□ 1.28
PCDH8-202ENST00000377942 VAMP4O75379 141 aa23.04■■□□□ 1.28
PCDH8-202ENST00000377942 NFATC2IPQ8NCF5 419 aa23.04■■□□□ 1.28
PCDH8-202ENST00000377942 TBC1D9Q6ZT07 1266 aa23.03■■□□□ 1.28
PCDH8-202ENST00000377942 ANKRD18AQ8IVF6 992 aa23.03■■□□□ 1.28
PCDH8-202ENST00000377942 PHAXQ9H814 394 aaKnown RBP23.03■■□□□ 1.28
PCDH8-202ENST00000377942 ARGLU1Q9NWB6 273 aaPredicted RBP23.03■■□□□ 1.28
PCDH8-202ENST00000377942 CBFA2T2O43439 604 aa23.03■■□□□ 1.28
PCDH8-202ENST00000377942 NLRP3Q96P20 1036 aa23.03■■□□□ 1.28
PCDH8-202ENST00000377942 C8orf76Q96K31 380 aa23.03■■□□□ 1.28
PCDH8-202ENST00000377942 IFIT3O14879 490 aaKnown RBP23.02■■□□□ 1.28
PCDH8-202ENST00000377942 RNMTO43148 476 aaKnown RBP23.02■■□□□ 1.28
PCDH8-202ENST00000377942 LMTK3Q96Q04 1460 aa23.02■■□□□ 1.28
PCDH8-202ENST00000377942 IGHDP01880 384 aa23.02■■□□□ 1.28
PCDH8-202ENST00000377942 ZHX3Q9H4I2 956 aa23.02■■□□□ 1.27
PCDH8-202ENST00000377942 ACSBG1Q96GR2 724 aa23.01■■□□□ 1.27
PCDH8-202ENST00000377942 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.01■■□□□ 1.27
PCDH8-202ENST00000377942 LUC7LQ9NQ29 371 aaKnown RBP23.01■■□□□ 1.27
PCDH8-202ENST00000377942 CNKSR2Q8WXI2 1034 aa23.01■■□□□ 1.27
PCDH8-202ENST00000377942 PHACTR3Q96KR7 559 aa23.01■■□□□ 1.27
PCDH8-202ENST00000377942 NYXQ9GZU5 481 aa23.01■■□□□ 1.27
PCDH8-202ENST00000377942 GSTO1P78417 241 aa23.01■■□□□ 1.27
PCDH8-202ENST00000377942 SYCP1Q15431 976 aa23.01■■□□□ 1.27
PCDH8-202ENST00000377942 LMBR1LQ6UX01 489 aa23.01■■□□□ 1.27
PCDH8-202ENST00000377942 ABCA8O94911 1581 aa23■■□□□ 1.27
PCDH8-202ENST00000377942 ATP2B3Q16720 1220 aa23■■□□□ 1.27
PCDH8-202ENST00000377942 CATIPQ7Z7H3 387 aa23■■□□□ 1.27
PCDH8-202ENST00000377942 BRPF1P55201 1214 aaPredicted RBP23■■□□□ 1.27
PCDH8-202ENST00000377942 SNRKQ9NRH2 765 aa23■■□□□ 1.27
PCDH8-202ENST00000377942 PPFIBP1Q86W92 1011 aa23■■□□□ 1.27
PCDH8-202ENST00000377942 PDE4BQ07343 736 aa22.99■■□□□ 1.27
PCDH8-202ENST00000377942 ZGPATQ8N5A5 531 aaKnown RBP22.99■■□□□ 1.27
PCDH8-202ENST00000377942 UTP14AQ9BVJ6 771 aaKnown RBP22.99■■□□□ 1.27
PCDH8-202ENST00000377942 PLEKHG3A1L390 1219 aa22.99■■□□□ 1.27
PCDH8-202ENST00000377942 ACBD3Q9H3P7 528 aa22.99■■□□□ 1.27
PCDH8-202ENST00000377942 GOLGA8AA7E2F4 631 aa22.99■■□□□ 1.27
PCDH8-202ENST00000377942 GOLGA8BA8MQT2 603 aa22.99■■□□□ 1.27
PCDH8-202ENST00000377942 TXLNBQ8N3L3 684 aa22.99■■□□□ 1.27
PCDH8-202ENST00000377942 SMTNL1A8MU46 457 aa22.98■■□□□ 1.27
PCDH8-202ENST00000377942 SSBP05455 408 aaKnown RBP eCLIP22.98■■□□□ 1.27
PCDH8-202ENST00000377942 PIBF1Q8WXW3 757 aa22.98■■□□□ 1.27
PCDH8-202ENST00000377942 HOXB7P09629 217 aa22.98■■□□□ 1.27
PCDH8-202ENST00000377942 TNIP1Q15025 636 aa22.98■■□□□ 1.27
PCDH8-202ENST00000377942 DZIP3Q86Y13 1208 aaKnown RBP22.98■■□□□ 1.27
PCDH8-202ENST00000377942 NIP7Q9Y221 180 aaKnown RBP eCLIP22.98■■□□□ 1.27
PCDH8-202ENST00000377942 SSRP1Q08945 709 aaKnown RBP22.97■■□□□ 1.27
PCDH8-202ENST00000377942 MYO5CQ9NQX4 1742 aa22.97■■□□□ 1.27
PCDH8-202ENST00000377942 PDE1AP54750 535 aa22.97■■□□□ 1.27
PCDH8-202ENST00000377942 FERMT3Q86UX7 667 aa22.97■■□□□ 1.27
PCDH8-202ENST00000377942 ADGBQ8N7X0 1667 aa22.97■■□□□ 1.27
PCDH8-202ENST00000377942 IL13P35225 146 aa22.97■■□□□ 1.27
PCDH8-202ENST00000377942 MAP3K11Q16584 847 aa22.97■■□□□ 1.27
PCDH8-202ENST00000377942 NCOA7Q8NI08 942 aa22.97■■□□□ 1.27
PCDH8-202ENST00000377942 PCDHB15Q9Y5E8 787 aa22.97■■□□□ 1.27
PCDH8-202ENST00000377942 KIF5BP33176 963 aa22.97■■□□□ 1.27
PCDH8-202ENST00000377942 CRNKL1Q9BZJ0 848 aaKnown RBP22.97■■□□□ 1.27
PCDH8-202ENST00000377942 ARHGEF10O15013 1369 aa22.96■■□□□ 1.27
PCDH8-202ENST00000377942 JARID2Q92833 1246 aaPredicted RBP22.96■■□□□ 1.27
PCDH8-202ENST00000377942 NEK1Q96PY6 1258 aa22.96■■□□□ 1.27
PCDH8-202ENST00000377942 RDXP35241 583 aaKnown RBP22.96■■□□□ 1.27
PCDH8-202ENST00000377942 DDX21Q9NR30 783 aaKnown RBP eCLIP22.96■■□□□ 1.27
PCDH8-202ENST00000377942 RAB34Q9BZG1 259 aa22.96■■□□□ 1.27
PCDH8-202ENST00000377942 MFSD6Q6ZSS7 791 aa22.95■■□□□ 1.26
PCDH8-202ENST00000377942 ZNF622Q969S3 477 aaKnown RBP eCLIP22.95■■□□□ 1.26
PCDH8-202ENST00000377942 HLA-DOAP06340 250 aa22.95■■□□□ 1.26
PCDH8-202ENST00000377942 TPTE2Q6XPS3 522 aa22.95■■□□□ 1.26
PCDH8-202ENST00000377942 MAGI3Q5TCQ9 1506 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms