RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 ZHX1Q9UKY1 873 aaPredicted RBP10.24□□□□□ -0.77
PCDH9-202ENST00000377865 MCM3P25205 808 aa10.24□□□□□ -0.77
PCDH9-202ENST00000377865 TXLNAP40222 546 aa10.24□□□□□ -0.77
PCDH9-202ENST00000377865 FAM69CQ0P6D2 419 aa10.24□□□□□ -0.77
PCDH9-202ENST00000377865 VPS53Q5VIR6 699 aa10.24□□□□□ -0.77
PCDH9-202ENST00000377865 CEP131Q9UPN4 1083 aa10.24□□□□□ -0.77
PCDH9-202ENST00000377865 ABCC4O15439 1325 aa10.24□□□□□ -0.77
PCDH9-202ENST00000377865 CHMLP26374 656 aa10.24□□□□□ -0.77
PCDH9-202ENST00000377865 IMMTQ16891 758 aaKnown RBP10.24□□□□□ -0.77
PCDH9-202ENST00000377865 NUTM2GQ5VZR2 741 aa10.24□□□□□ -0.77
PCDH9-202ENST00000377865 CCAR1Q8IX12 1150 aaKnown RBP10.24□□□□□ -0.77
PCDH9-202ENST00000377865 DDX11Q96FC9 970 aa10.24□□□□□ -0.77
PCDH9-202ENST00000377865 CFAP100Q494V2 611 aa10.24□□□□□ -0.77
PCDH9-202ENST00000377865 ZNF397Q8NF99 534 aaPredicted RBP10.24□□□□□ -0.77
PCDH9-202ENST00000377865 SPG7Q9UQ90 795 aa10.24□□□□□ -0.77
PCDH9-202ENST00000377865 SPDYE4A6NLX3 237 aa10.24□□□□□ -0.77
PCDH9-202ENST00000377865 MARCH6O60337 910 aa10.24□□□□□ -0.77
PCDH9-202ENST00000377865 PPP1R42Q7Z4L9 355 aa10.24□□□□□ -0.77
PCDH9-202ENST00000377865 KLHL34Q8N239 644 aa10.24□□□□□ -0.77
PCDH9-202ENST00000377865 NPATQ14207 1427 aa10.23□□□□□ -0.77
PCDH9-202ENST00000377865 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.23□□□□□ -0.77
PCDH9-202ENST00000377865 TULP1O00294 542 aaPredicted RBP10.23□□□□□ -0.77
PCDH9-202ENST00000377865 FSIP1Q8NA03 581 aa10.23□□□□□ -0.77
PCDH9-202ENST00000377865 BRPF1P55201 1214 aaPredicted RBP10.23□□□□□ -0.77
PCDH9-202ENST00000377865 TYRO3Q06418 890 aa10.23□□□□□ -0.77
PCDH9-202ENST00000377865 LARP1Q6PKG0 1096 aaKnown RBP10.23□□□□□ -0.77
PCDH9-202ENST00000377865 TOP1P11387 765 aaKnown RBP10.23□□□□□ -0.77
PCDH9-202ENST00000377865 TSPYL6Q8N831 410 aa10.23□□□□□ -0.77
PCDH9-202ENST00000377865 ZNHIT6Q9NWK9 470 aaKnown RBP10.23□□□□□ -0.77
PCDH9-202ENST00000377865 HYPKQ9NX55 129 aa10.23□□□□□ -0.77
PCDH9-202ENST00000377865 RAD50Q92878 1312 aa10.23□□□□□ -0.77
PCDH9-202ENST00000377865 TTC12Q9H892 705 aaPredicted RBP10.23□□□□□ -0.77
PCDH9-202ENST00000377865 CCDC69A6NI79 296 aa10.22□□□□□ -0.77
PCDH9-202ENST00000377865 RAPGEF3O95398 923 aa10.22□□□□□ -0.77
PCDH9-202ENST00000377865 USP8P40818 1118 aa10.22□□□□□ -0.77
PCDH9-202ENST00000377865 AMOTQ4VCS5 1084 aa10.22□□□□□ -0.77
PCDH9-202ENST00000377865 CCDC186Q7Z3E2 898 aa10.22□□□□□ -0.77
PCDH9-202ENST00000377865 TIGD1Q96MW7 591 aa10.22□□□□□ -0.77
PCDH9-202ENST00000377865 SRRTQ9BXP5 876 aaKnown RBP10.22□□□□□ -0.77
PCDH9-202ENST00000377865 TTC21AQ8NDW8 1320 aa10.22□□□□□ -0.77
PCDH9-202ENST00000377865 DBF4Q9UBU7 674 aaPredicted RBP10.22□□□□□ -0.77
PCDH9-202ENST00000377865 TATP17735 454 aaPredicted RBP10.22□□□□□ -0.77
PCDH9-202ENST00000377865 CCDC148Q8NFR7 591 aa10.22□□□□□ -0.77
PCDH9-202ENST00000377865 EDC4Q6P2E9 1401 aaKnown RBP10.22□□□□□ -0.77
PCDH9-202ENST00000377865 AK2P54819 239 aa10.22□□□□□ -0.77
PCDH9-202ENST00000377865 TSHZ3Q63HK5 1081 aa10.22□□□□□ -0.77
PCDH9-202ENST00000377865 TMC6Q7Z403 805 aa10.22□□□□□ -0.77
PCDH9-202ENST00000377865 TET3O43151 1660 aa10.22□□□□□ -0.77
PCDH9-202ENST00000377865 YTHDC2Q9H6S0 1430 aaKnown RBP10.21□□□□□ -0.77
PCDH9-202ENST00000377865 KIF20AO95235 890 aa10.21□□□□□ -0.77
PCDH9-202ENST00000377865 DNM1Q05193 864 aaKnown RBP10.21□□□□□ -0.77
PCDH9-202ENST00000377865 MAP9Q49MG5 647 aa10.21□□□□□ -0.77
PCDH9-202ENST00000377865 KCNH5Q8NCM2 988 aa10.21□□□□□ -0.77
PCDH9-202ENST00000377865 C8orf76Q96K31 380 aa10.21□□□□□ -0.77
PCDH9-202ENST00000377865 NEK1Q96PY6 1258 aa10.21□□□□□ -0.77
PCDH9-202ENST00000377865 KIF5CO60282 957 aa10.21□□□□□ -0.77
PCDH9-202ENST00000377865 URI1O94763 535 aaPredicted RBP10.21□□□□□ -0.77
PCDH9-202ENST00000377865 RDXP35241 583 aaKnown RBP10.21□□□□□ -0.77
PCDH9-202ENST00000377865 STIM1Q13586 685 aa10.21□□□□□ -0.77
PCDH9-202ENST00000377865 BOLA2Q9H3K6 86 aa10.21□□□□□ -0.77
PCDH9-202ENST00000377865 SLU7O95391 586 aaKnown RBP10.21□□□□□ -0.78
PCDH9-202ENST00000377865 CEP89Q96ST8 783 aa10.21□□□□□ -0.78
PCDH9-202ENST00000377865 H0YHG0 523 aa10.21□□□□□ -0.78
PCDH9-202ENST00000377865 BRD1O95696 1058 aa10.21□□□□□ -0.78
PCDH9-202ENST00000377865 MYO6Q9UM54 1294 aa10.21□□□□□ -0.78
PCDH9-202ENST00000377865 USP19O94966 1318 aa10.21□□□□□ -0.78
PCDH9-202ENST00000377865 SLC3A2P08195 630 aaKnown RBP10.2□□□□□ -0.78
PCDH9-202ENST00000377865 JAKMIP3Q5VZ66 844 aa10.2□□□□□ -0.78
PCDH9-202ENST00000377865 KIF6Q6ZMV9 814 aa10.2□□□□□ -0.78
PCDH9-202ENST00000377865 TRMT1Q9NXH9 659 aaKnown RBP10.2□□□□□ -0.78
PCDH9-202ENST00000377865 NPHP3Q7Z494 1330 aa10.2□□□□□ -0.78
PCDH9-202ENST00000377865 TTLL5Q6EMB2 1281 aa10.2□□□□□ -0.78
PCDH9-202ENST00000377865 FAM177A1Q8N128 213 aaPredicted RBP10.2□□□□□ -0.78
PCDH9-202ENST00000377865 FAM107BQ9H098 131 aa10.2□□□□□ -0.78
PCDH9-202ENST00000377865 KIAA0232Q92628 1395 aa10.2□□□□□ -0.78
PCDH9-202ENST00000377865 CFAP74Q9C0B2 1584 aa10.2□□□□□ -0.78
PCDH9-202ENST00000377865 SKILP12757 684 aa10.2□□□□□ -0.78
PCDH9-202ENST00000377865 ATL3Q6DD88 541 aa10.2□□□□□ -0.78
PCDH9-202ENST00000377865 FAM135BQ49AJ0 1406 aa10.2□□□□□ -0.78
PCDH9-202ENST00000377865 NAP1L1P55209 391 aaKnown RBP10.2□□□□□ -0.78
PCDH9-202ENST00000377865 AXDND1Q5T1B0 1012 aaPredicted RBP10.2□□□□□ -0.78
PCDH9-202ENST00000377865 RUFY3Q7L099 469 aa10.2□□□□□ -0.78
PCDH9-202ENST00000377865 NACAP1Q9BZK3 213 aa10.2□□□□□ -0.78
PCDH9-202ENST00000377865 NLRP2Q9NX02 1062 aa10.2□□□□□ -0.78
PCDH9-202ENST00000377865 MADDQ8WXG6 1647 aa10.2□□□□□ -0.78
PCDH9-202ENST00000377865 ALDH1L1O75891 902 aa10.2□□□□□ -0.78
PCDH9-202ENST00000377865 ARHGAP29Q52LW3 1261 aa10.2□□□□□ -0.78
PCDH9-202ENST00000377865 DACT1Q9NYF0 836 aa10.2□□□□□ -0.78
PCDH9-202ENST00000377865 TFIP11Q9UBB9 837 aaKnown RBP10.2□□□□□ -0.78
PCDH9-202ENST00000377865 RBM8AQ9Y5S9 174 aaKnown RBP10.2□□□□□ -0.78
PCDH9-202ENST00000377865 KIAA0754O94854 1291 aa10.19□□□□□ -0.78
PCDH9-202ENST00000377865 GABPB1Q06547 395 aaPredicted RBP10.19□□□□□ -0.78
PCDH9-202ENST00000377865 REREQ9P2R6 1566 aa10.19□□□□□ -0.78
PCDH9-202ENST00000377865 AKAP2Q9Y2D5 859 aa10.19□□□□□ -0.78
PCDH9-202ENST00000377865 CDC42BPBQ9Y5S2 1711 aa10.19□□□□□ -0.78
PCDH9-202ENST00000377865 PTGS1P23219 599 aa10.19□□□□□ -0.78
PCDH9-202ENST00000377865 LUC7LQ9NQ29 371 aaKnown RBP10.19□□□□□ -0.78
PCDH9-202ENST00000377865 EIF4A2Q14240 407 aaKnown RBP10.19□□□□□ -0.78
PCDH9-202ENST00000377865 CCDC102AQ96A19 550 aa10.19□□□□□ -0.78
PCDH9-202ENST00000377865 LARP6Q9BRS8 491 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms