RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 KCNA3P22001 575 aa15.09■□□□□ 0.01
SMARCE1-203ENST00000377808 PRR5LQ6MZQ0 368 aa15.09■□□□□ 0.01
SMARCE1-203ENST00000377808 NBPF5PQ86XG9 351 aaPredicted RBP15.09■□□□□ 0.01
SMARCE1-203ENST00000377808 NIP7Q9Y221 180 aaKnown RBP eCLIP15.09■□□□□ 0.01
SMARCE1-203ENST00000377808 NRXN2Q9P2S2 1712 aa15.09■□□□□ 0.01
SMARCE1-203ENST00000377808 CHL1O00533 1208 aa15.08■□□□□ 0
SMARCE1-203ENST00000377808 HLFQ16534 295 aa15.08■□□□□ 0
SMARCE1-203ENST00000377808 KRT24Q2M2I5 525 aa15.08■□□□□ 0
SMARCE1-203ENST00000377808 CLEC4GQ6UXB4 293 aa15.08■□□□□ 0
SMARCE1-203ENST00000377808 ZBTB3Q9H5J0 574 aa15.08■□□□□ 0
SMARCE1-203ENST00000377808 H0YIN7 160 aa15.07■□□□□ 0
SMARCE1-203ENST00000377808 ANXA1P04083 346 aa15.07■□□□□ 0
SMARCE1-203ENST00000377808 CALD1Q05682 793 aaKnown RBP15.07■□□□□ 0
SMARCE1-203ENST00000377808 TTLL7Q6ZT98 887 aa15.07■□□□□ 0
SMARCE1-203ENST00000377808 ZNF622Q969S3 477 aaKnown RBP eCLIP15.07■□□□□ 08e-14■■■□□ 17.5
SMARCE1-203ENST00000377808 ERBB4Q15303 1308 aa15.07■□□□□ 0
SMARCE1-203ENST00000377808 BRCA1P38398 1863 aaKnown RBP15.06■□□□□ 0
SMARCE1-203ENST00000377808 GTF2E1P29083 439 aaPredicted RBP15.06■□□□□ 0
SMARCE1-203ENST00000377808 PDE6BP35913 854 aa15.06■□□□□ 0
SMARCE1-203ENST00000377808 ZNF526Q8TF50 670 aaPredicted RBP15.06■□□□□ 0
SMARCE1-203ENST00000377808 CFAP44Q96MT7 982 aa15.06■□□□□ 0
SMARCE1-203ENST00000377808 MAP3K15Q6ZN16 1313 aa15.06■□□□□ 0
SMARCE1-203ENST00000377808 AIMP1Q12904 312 aaKnown RBP15.05■□□□□ -0
SMARCE1-203ENST00000377808 PROSER3Q2NL68 480 aa15.05■□□□□ -0
SMARCE1-203ENST00000377808 BRIP1Q9BX63 1249 aa15.05■□□□□ -0
SMARCE1-203ENST00000377808 MBIPQ9NS73 344 aa15.05■□□□□ -0
SMARCE1-203ENST00000377808 ATP10DQ9P241 1426 aa15.04■□□□□ -0
SMARCE1-203ENST00000377808 GPTP24298 496 aa15.04■□□□□ -0
SMARCE1-203ENST00000377808 HDGFL1Q5TGJ6 251 aa15.04■□□□□ -0
SMARCE1-203ENST00000377808 TPTE2Q6XPS3 522 aa15.04■□□□□ -0
SMARCE1-203ENST00000377808 TTLL6Q8N841 843 aa15.04■□□□□ -0
SMARCE1-203ENST00000377808 ZNF219Q9P2Y4 722 aaPredicted RBP15.04■□□□□ -0
SMARCE1-203ENST00000377808 ERVV-1B6SEH8 477 aa15.03■□□□□ -0
SMARCE1-203ENST00000377808 GNAI1P63096 354 aa15.03■□□□□ -0
SMARCE1-203ENST00000377808 IFT57Q9NWB7 429 aa15.03■□□□□ -0
SMARCE1-203ENST00000377808 SALL2Q9Y467 1007 aaPredicted RBP15.03■□□□□ -0
SMARCE1-203ENST00000377808 ARFGEF1Q9Y6D6 1849 aa15.03■□□□□ -0
SMARCE1-203ENST00000377808 ANKRD31Q8N7Z5 1873 aa15.02■□□□□ -0
SMARCE1-203ENST00000377808 RGL2O15211 777 aa15.02■□□□□ -0
SMARCE1-203ENST00000377808 PDIA6Q15084 440 aa15.02■□□□□ -0
SMARCE1-203ENST00000377808 DUSP27Q5VZP5 1158 aa15.02■□□□□ -0
SMARCE1-203ENST00000377808 FAM9BQ8IZU0 186 aa15.02■□□□□ -0
SMARCE1-203ENST00000377808 CHPF2Q9P2E5 772 aa15.02■□□□□ -0
SMARCE1-203ENST00000377808 PDZRN3Q9UPQ7 1066 aa15.02■□□□□ -0
SMARCE1-203ENST00000377808 DLEC1Q9Y238 1755 aa15.01□□□□□ -0.01
SMARCE1-203ENST00000377808 ELL2O00472 640 aaPredicted RBP15.01□□□□□ -0.01
SMARCE1-203ENST00000377808 COPS6Q7L5N1 327 aa15.01□□□□□ -0.01
SMARCE1-203ENST00000377808 NUTM1Q86Y26 1132 aa15.01□□□□□ -0.01
SMARCE1-203ENST00000377808 XAGE3Q8WTP9 111 aa15.01□□□□□ -0.01
SMARCE1-203ENST00000377808 NYXQ9GZU5 481 aa15.01□□□□□ -0.01
SMARCE1-203ENST00000377808 COL11A2P13942 1736 aaPredicted RBP15.01□□□□□ -0.01
SMARCE1-203ENST00000377808 HOXB7P09629 217 aa15□□□□□ -0.01
SMARCE1-203ENST00000377808 RASSF7Q02833 373 aa15□□□□□ -0.01
SMARCE1-203ENST00000377808 GPBP1L1Q9HC44 474 aaPredicted RBP15□□□□□ -0.01
SMARCE1-203ENST00000377808 DDX21Q9NR30 783 aaKnown RBP eCLIP15□□□□□ -0.01
SMARCE1-203ENST00000377808 NUP98P52948 1817 aa15□□□□□ -0.01
SMARCE1-203ENST00000377808 ZNF853P0CG23 659 aa14.99□□□□□ -0.01
SMARCE1-203ENST00000377808 C9orf131Q5VYM1 1079 aa14.99□□□□□ -0.01
SMARCE1-203ENST00000377808 GIGYF2Q6Y7W6 1299 aaKnown RBP14.99□□□□□ -0.01
SMARCE1-203ENST00000377808 MASTLQ96GX5 879 aa14.99□□□□□ -0.01
SMARCE1-203ENST00000377808 RNF181Q9P0P0 153 aa14.99□□□□□ -0.01
SMARCE1-203ENST00000377808 UBN2Q6ZU65 1347 aa14.99□□□□□ -0.01
SMARCE1-203ENST00000377808 ADCY9O60503 1353 aa14.99□□□□□ -0.01
SMARCE1-203ENST00000377808 C21orf2O43822 256 aa14.98□□□□□ -0.01
SMARCE1-203ENST00000377808 SRGNP10124 158 aa14.98□□□□□ -0.01
SMARCE1-203ENST00000377808 SUSD4Q5VX71 490 aa14.98□□□□□ -0.01
SMARCE1-203ENST00000377808 STYK1Q6J9G0 422 aa14.98□□□□□ -0.01
SMARCE1-203ENST00000377808 LRP10Q7Z4F1 713 aa14.98□□□□□ -0.01
SMARCE1-203ENST00000377808 TSR2Q969E8 191 aaKnown RBP14.98□□□□□ -0.01
SMARCE1-203ENST00000377808 CNKSR1Q969H4 720 aa14.98□□□□□ -0.01
SMARCE1-203ENST00000377808 ERFEQ4G0M1 354 aa14.97□□□□□ -0.01
SMARCE1-203ENST00000377808 PPP1R42Q7Z4L9 355 aa14.97□□□□□ -0.01
SMARCE1-203ENST00000377808 WWC1Q8IX03 1113 aa14.97□□□□□ -0.01
SMARCE1-203ENST00000377808 DBF4Q9UBU7 674 aaPredicted RBP14.97□□□□□ -0.01
SMARCE1-203ENST00000377808 ABCC12Q96J65 1359 aa14.97□□□□□ -0.01
SMARCE1-203ENST00000377808 CACNA1SQ13698 1873 aa14.97□□□□□ -0.01
SMARCE1-203ENST00000377808 NPR1P16066 1061 aa14.96□□□□□ -0.01
SMARCE1-203ENST00000377808 PARP10Q53GL7 1025 aa14.96□□□□□ -0.01
SMARCE1-203ENST00000377808 HSP90AB3PQ58FF7 597 aa14.96□□□□□ -0.01
SMARCE1-203ENST00000377808 PRPF40BQ6NWY9 871 aaKnown RBP14.96□□□□□ -0.01
SMARCE1-203ENST00000377808 ZNF34Q8IZ26 560 aa14.96□□□□□ -0.01
SMARCE1-203ENST00000377808 ZNF428Q96B54 188 aa14.96□□□□□ -0.01
SMARCE1-203ENST00000377808 CCDC27Q2M243 656 aa14.95□□□□□ -0.02
SMARCE1-203ENST00000377808 C8orf58Q8NAV2 365 aa14.95□□□□□ -0.02
SMARCE1-203ENST00000377808 UTP14AQ9BVJ6 771 aaKnown RBP14.95□□□□□ -0.02
SMARCE1-203ENST00000377808 HYPKQ9NX55 129 aa14.95□□□□□ -0.02
SMARCE1-203ENST00000377808 NTSR2O95665 410 aa14.94□□□□□ -0.02
SMARCE1-203ENST00000377808 RPGRQ92834 1020 aaKnown RBP14.94□□□□□ -0.02
SMARCE1-203ENST00000377808 TNRC6CQ9HCJ0 1690 aaKnown RBP14.94□□□□□ -0.02
SMARCE1-203ENST00000377808 IBTKQ9P2D0 1353 aaPredicted RBP14.94□□□□□ -0.02
SMARCE1-203ENST00000377808 GOLGA2Q08379 1002 aa14.93□□□□□ -0.02
SMARCE1-203ENST00000377808 ANKRD13DQ6ZTN6 518 aa14.93□□□□□ -0.02
SMARCE1-203ENST00000377808 PLBD2Q8NHP8 589 aa14.93□□□□□ -0.02
SMARCE1-203ENST00000377808 NFKBIEO00221 500 aa14.92□□□□□ -0.02
SMARCE1-203ENST00000377808 LMNB1P20700 586 aa14.92□□□□□ -0.02
SMARCE1-203ENST00000377808 TCIRG1Q13488 830 aa14.92□□□□□ -0.02
SMARCE1-203ENST00000377808 SOGA3Q5TF21 947 aa14.92□□□□□ -0.02
SMARCE1-203ENST00000377808 CCDC30Q5VVM6 783 aa14.92□□□□□ -0.02
SMARCE1-203ENST00000377808 RIC3Q7Z5B4 369 aa14.92□□□□□ -0.02
SMARCE1-203ENST00000377808 TSPYL6Q8N831 410 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms