RNA–Protein interactions for RNA: ENST00000377755.8

KRT40-201, Transcript of keratin 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT40, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40-201ENST00000377755 EIF5P55010 431 aaKnown RBP16.42■□□□□ 0.22
KRT40-201ENST00000377755 SRCIN1Q9C0H9 1055 aa16.42■□□□□ 0.22
KRT40-201ENST00000377755 ZBTB3Q9H5J0 574 aa16.42■□□□□ 0.22
KRT40-201ENST00000377755 PROM2Q8N271 834 aa16.41■□□□□ 0.22
KRT40-201ENST00000377755 CCDC136Q96JN2 1154 aa16.41■□□□□ 0.22
KRT40-201ENST00000377755 ARXQ96QS3 562 aa16.41■□□□□ 0.22
KRT40-201ENST00000377755 METTL22Q9BUU2 404 aaPredicted RBP16.41■□□□□ 0.22
KRT40-201ENST00000377755 PLSCR1O15162 318 aa16.4■□□□□ 0.22
KRT40-201ENST00000377755 AAMPQ13685 434 aa16.4■□□□□ 0.22
KRT40-201ENST00000377755 MEIS3Q99687 375 aa16.4■□□□□ 0.22
KRT40-201ENST00000377755 PCDHB15Q9Y5E8 787 aa16.4■□□□□ 0.22
KRT40-201ENST00000377755 CNTNAP4Q9C0A0 1308 aa16.4■□□□□ 0.22
KRT40-201ENST00000377755 ATP10DQ9P241 1426 aa16.4■□□□□ 0.22
KRT40-201ENST00000377755 RREB1Q92766 1687 aa16.4■□□□□ 0.22
KRT40-201ENST00000377755 IGKV5-2P06315 115 aa16.4■□□□□ 0.22
KRT40-201ENST00000377755 CWF19L2Q2TBE0 894 aaKnown RBP16.4■□□□□ 0.22
KRT40-201ENST00000377755 MYD88Q99836 296 aa16.4■□□□□ 0.22
KRT40-201ENST00000377755 TXNRD1Q16881 649 aa16.39■□□□□ 0.21
KRT40-201ENST00000377755 SLC27A3Q5K4L6 730 aa16.39■□□□□ 0.21
KRT40-201ENST00000377755 RC3H1Q5TC82 1133 aaKnown RBP16.39■□□□□ 0.21
KRT40-201ENST00000377755 SMIM5Q71RC9 77 aa16.39■□□□□ 0.21
KRT40-201ENST00000377755 LINS1Q8NG48 757 aa16.39■□□□□ 0.21
KRT40-201ENST00000377755 USP44Q9H0E7 712 aa16.39■□□□□ 0.21
KRT40-201ENST00000377755 C1orf115Q9H7X2 142 aa16.39■□□□□ 0.21
KRT40-201ENST00000377755 TBC1D2BQ9UPU7 963 aa16.39■□□□□ 0.21
KRT40-201ENST00000377755 TAF1LQ8IZX4 1826 aa16.39■□□□□ 0.21
KRT40-201ENST00000377755 KIF6Q6ZMV9 814 aa16.38■□□□□ 0.21
KRT40-201ENST00000377755 DZIP3Q86Y13 1208 aaKnown RBP16.38■□□□□ 0.21
KRT40-201ENST00000377755 CHMP4BQ9H444 224 aaKnown RBP16.38■□□□□ 0.21
KRT40-201ENST00000377755 ARFGEF2Q9Y6D5 1785 aa16.38■□□□□ 0.21
KRT40-201ENST00000377755 MAP3K15Q6ZN16 1313 aa16.38■□□□□ 0.21
KRT40-201ENST00000377755 NEXNQ0ZGT2 675 aa16.38■□□□□ 0.21
KRT40-201ENST00000377755 NPM2Q86SE8 214 aaKnown RBP16.38■□□□□ 0.21
KRT40-201ENST00000377755 N4BP2Q86UW6 1770 aaPredicted RBP16.37■□□□□ 0.21
KRT40-201ENST00000377755 NUP188Q5SRE5 1749 aa16.37■□□□□ 0.21
KRT40-201ENST00000377755 TNS1Q9HBL0 1735 aaKnown RBP16.37■□□□□ 0.21
KRT40-201ENST00000377755 ATP5J2-PTCD1G3V325 749 aa16.37■□□□□ 0.21
KRT40-201ENST00000377755 ALDH1L1O75891 902 aa16.37■□□□□ 0.21
KRT40-201ENST00000377755 HLFQ16534 295 aa16.37■□□□□ 0.21
KRT40-201ENST00000377755 NEURL1BA8MQ27 555 aa16.36■□□□□ 0.21
KRT40-201ENST00000377755 GNPATO15228 680 aa16.36■□□□□ 0.21
KRT40-201ENST00000377755 RPS6KA4O75676 772 aa16.36■□□□□ 0.21
KRT40-201ENST00000377755 AMIGO3Q86WK7 504 aa16.36■□□□□ 0.21
KRT40-201ENST00000377755 COL15A1P39059 1388 aa16.36■□□□□ 0.21
KRT40-201ENST00000377755 NBPF7P0C2Y1 421 aaPredicted RBP16.35■□□□□ 0.21
KRT40-201ENST00000377755 GIGYF2Q6Y7W6 1299 aaKnown RBP16.35■□□□□ 0.21
KRT40-201ENST00000377755 C4BP0C0L5 1744 aa16.35■□□□□ 0.21
KRT40-201ENST00000377755 IGHDP01880 384 aa16.35■□□□□ 0.21
KRT40-201ENST00000377755 TCIRG1Q13488 830 aa16.35■□□□□ 0.21
KRT40-201ENST00000377755 ERVV-1B6SEH8 477 aa16.34■□□□□ 0.21
KRT40-201ENST00000377755 GNAI3P08754 354 aa16.34■□□□□ 0.21
KRT40-201ENST00000377755 GCKRQ14397 625 aa16.34■□□□□ 0.21
KRT40-201ENST00000377755 RTCBQ9Y3I0 505 aaKnown RBP16.34■□□□□ 0.21
KRT40-201ENST00000377755 CAMTA2O94983 1202 aa16.33■□□□□ 0.21
KRT40-201ENST00000377755 AK7Q96M32 723 aa16.33■□□□□ 0.21
KRT40-201ENST00000377755 C9orf78Q9NZ63 289 aaPredicted RBP16.33■□□□□ 0.21
KRT40-201ENST00000377755 UBTFL1P0CB47 393 aaPredicted RBP16.33■□□□□ 0.2
KRT40-201ENST00000377755 ISCA1Q9BUE6 129 aa16.33■□□□□ 0.2
KRT40-201ENST00000377755 A0A087WZG4 1122 aa16.32■□□□□ 0.2
KRT40-201ENST00000377755 GRM8O00222 908 aa16.32■□□□□ 0.2
KRT40-201ENST00000377755 GNAI2P04899 355 aa16.32■□□□□ 0.2
KRT40-201ENST00000377755 EN1Q05925 392 aaPredicted RBP16.32■□□□□ 0.2
KRT40-201ENST00000377755 EZH2Q15910 746 aaKnown RBP16.31■□□□□ 0.2
KRT40-201ENST00000377755 SIRT2Q8IXJ6 389 aa16.31■□□□□ 0.2
KRT40-201ENST00000377755 JARID2Q92833 1246 aaPredicted RBP16.31■□□□□ 0.2
KRT40-201ENST00000377755 ARHGEF1Q92888 912 aaKnown RBP16.31■□□□□ 0.2
KRT40-201ENST00000377755 CAMKK2Q96RR4 588 aa16.31■□□□□ 0.2
KRT40-201ENST00000377755 LRRFIP2Q9Y608 721 aaKnown RBP16.31■□□□□ 0.2
KRT40-201ENST00000377755 UTYO14607 1347 aa16.31■□□□□ 0.2
KRT40-201ENST00000377755 KDM2BQ8NHM5 1336 aa16.31■□□□□ 0.2
KRT40-201ENST00000377755 PHF14O94880 888 aa16.31■□□□□ 0.2
KRT40-201ENST00000377755 GPTP24298 496 aa16.31■□□□□ 0.2
KRT40-201ENST00000377755 CCDC191Q8NCU4 936 aa16.31■□□□□ 0.2
KRT40-201ENST00000377755 CWC25Q9NXE8 425 aaPredicted RBP16.31■□□□□ 0.2
KRT40-201ENST00000377755 IBTKQ9P2D0 1353 aaPredicted RBP16.31■□□□□ 0.2
KRT40-201ENST00000377755 NUP98P52948 1817 aa16.3■□□□□ 0.2
KRT40-201ENST00000377755 AFDNP55196 1824 aaKnown RBP16.3■□□□□ 0.2
KRT40-201ENST00000377755 TRIM28Q13263 835 aaKnown RBP16.3■□□□□ 0.2
KRT40-201ENST00000377755 HSP90AB3PQ58FF7 597 aa16.3■□□□□ 0.2
KRT40-201ENST00000377755 TRAPPC3LQ5T215 181 aa16.3■□□□□ 0.2
KRT40-201ENST00000377755 CEP85Q6P2H3 762 aa16.3■□□□□ 0.2
KRT40-201ENST00000377755 HDAC1Q13547 482 aaPredicted RBP16.29■□□□□ 0.2
KRT40-201ENST00000377755 RWDD1Q9H446 243 aaPredicted RBP16.29■□□□□ 0.2
KRT40-201ENST00000377755 SRP68Q9UHB9 627 aaKnown RBP16.29■□□□□ 0.2
KRT40-201ENST00000377755 NARFQ9UHQ1 456 aa16.29■□□□□ 0.2
KRT40-201ENST00000377755 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.29■□□□□ 0.2
KRT40-201ENST00000377755 SF3B2Q13435 895 aaKnown RBP16.29■□□□□ 0.2
KRT40-201ENST00000377755 ZNF827Q17R98 1081 aa16.29■□□□□ 0.2
KRT40-201ENST00000377755 USPL1Q5W0Q7 1092 aa16.29■□□□□ 0.2
KRT40-201ENST00000377755 DEFB132Q7Z7B7 95 aa16.29■□□□□ 0.2
KRT40-201ENST00000377755 RPAP2Q8IXW5 612 aaPredicted RBP16.29■□□□□ 0.2
KRT40-201ENST00000377755 ZNF34Q8IZ26 560 aa16.29■□□□□ 0.2
KRT40-201ENST00000377755 ANKRD44Q8N8A2 993 aa16.29■□□□□ 0.2
KRT40-201ENST00000377755 KAZALD1Q96I82 304 aa16.29■□□□□ 0.2
KRT40-201ENST00000377755 BCL2L12Q9HB09 334 aa16.29■□□□□ 0.2
KRT40-201ENST00000377755 RGPD3A6NKT7 1758 aaPredicted RBP16.28■□□□□ 0.2
KRT40-201ENST00000377755 RGPD4Q7Z3J3 1758 aa16.28■□□□□ 0.2
KRT40-201ENST00000377755 H7C1W4 665 aa16.28■□□□□ 0.2
KRT40-201ENST00000377755 CASP7P55210 303 aa16.28■□□□□ 0.2
KRT40-201ENST00000377755 RTL5Q5HYW3 569 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms