RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 MPHOSPH10O00566 681 aaKnown RBP10.16□□□□□ -0.78
CRNKL1-202ENST00000377340 MX1P20591 662 aa10.16□□□□□ -0.78
CRNKL1-202ENST00000377340 TET3O43151 1660 aa10.16□□□□□ -0.78
CRNKL1-202ENST00000377340 PLXNC1O60486 1568 aa10.16□□□□□ -0.78
CRNKL1-202ENST00000377340 CHL1O00533 1208 aa10.16□□□□□ -0.78
CRNKL1-202ENST00000377340 POLR3DP05423 398 aaPredicted RBP10.16□□□□□ -0.78
CRNKL1-202ENST00000377340 MRPL50Q8N5N7 158 aaKnown RBP10.16□□□□□ -0.78
CRNKL1-202ENST00000377340 NYXQ9GZU5 481 aa10.16□□□□□ -0.78
CRNKL1-202ENST00000377340 ATF5Q9Y2D1 282 aaPredicted RBP10.16□□□□□ -0.78
CRNKL1-202ENST00000377340 CLTCQ00610 1675 aaKnown RBP10.16□□□□□ -0.78
CRNKL1-202ENST00000377340 ZSCAN25Q6NSZ9 544 aa10.16□□□□□ -0.78
CRNKL1-202ENST00000377340 NUP133Q8WUM0 1156 aa10.16□□□□□ -0.78
CRNKL1-202ENST00000377340 JDP2Q8WYK2 163 aa10.16□□□□□ -0.78
CRNKL1-202ENST00000377340 GLIPR1L2Q4G1C9 344 aa10.15□□□□□ -0.78
CRNKL1-202ENST00000377340 SH3TC1Q8TE82 1336 aa10.15□□□□□ -0.78
CRNKL1-202ENST00000377340 MAP3K12Q12852 859 aa10.15□□□□□ -0.78
CRNKL1-202ENST00000377340 HIP1O00291 1037 aa10.15□□□□□ -0.78
CRNKL1-202ENST00000377340 GLRX3O76003 335 aaKnown RBP10.15□□□□□ -0.78
CRNKL1-202ENST00000377340 KLHDC4Q8TBB5 520 aa10.15□□□□□ -0.78
CRNKL1-202ENST00000377340 ANP32EQ9BTT0 268 aa10.15□□□□□ -0.78
CRNKL1-202ENST00000377340 MYOM2P54296 1465 aa10.15□□□□□ -0.79
CRNKL1-202ENST00000377340 EIF4A1P60842 406 aaKnown RBP10.15□□□□□ -0.79
CRNKL1-202ENST00000377340 STK3Q13188 491 aa10.15□□□□□ -0.79
CRNKL1-202ENST00000377340 ATP2B3Q16720 1220 aa10.15□□□□□ -0.79
CRNKL1-202ENST00000377340 RNF17Q9BXT8 1623 aaKnown RBP10.14□□□□□ -0.79
CRNKL1-202ENST00000377340 RBM6P78332 1123 aaKnown RBP10.14□□□□□ -0.79
CRNKL1-202ENST00000377340 GPR162Q16538 588 aa10.14□□□□□ -0.79
CRNKL1-202ENST00000377340 TTLL7Q6ZT98 887 aa10.14□□□□□ -0.79
CRNKL1-202ENST00000377340 GJD4Q96KN9 370 aaPredicted RBP10.14□□□□□ -0.79
CRNKL1-202ENST00000377340 BCS1LQ9Y276 419 aa10.14□□□□□ -0.79
CRNKL1-202ENST00000377340 OGFOD1Q8N543 542 aa10.14□□□□□ -0.79
CRNKL1-202ENST00000377340 GBP4Q96PP9 640 aa10.14□□□□□ -0.79
CRNKL1-202ENST00000377340 GJA3Q9Y6H8 435 aa10.14□□□□□ -0.79
CRNKL1-202ENST00000377340 PRAMEF22A3QJZ6 481 aa10.13□□□□□ -0.79
CRNKL1-202ENST00000377340 KCNQ2O43526 872 aa10.13□□□□□ -0.79
CRNKL1-202ENST00000377340 GIGYF1O75420 1035 aaPredicted RBP10.13□□□□□ -0.79
CRNKL1-202ENST00000377340 ALDH1L1O75891 902 aa10.13□□□□□ -0.79
CRNKL1-202ENST00000377340 RLBP1P12271 317 aa10.13□□□□□ -0.79
CRNKL1-202ENST00000377340 ZBTB1Q9Y2K1 713 aa10.13□□□□□ -0.79
CRNKL1-202ENST00000377340 CLTCL1P53675 1640 aa10.13□□□□□ -0.79
CRNKL1-202ENST00000377340 RAB11FIP3O75154 756 aa10.13□□□□□ -0.79
CRNKL1-202ENST00000377340 USPL1Q5W0Q7 1092 aa10.13□□□□□ -0.79
CRNKL1-202ENST00000377340 MKNK2Q9HBH9 465 aa10.13□□□□□ -0.79
CRNKL1-202ENST00000377340 ABCA6Q8N139 1617 aa10.13□□□□□ -0.79
CRNKL1-202ENST00000377340 CEP152O94986 1710 aa10.13□□□□□ -0.79
CRNKL1-202ENST00000377340 CAMSAP1Q5T5Y3 1602 aa10.13□□□□□ -0.79
CRNKL1-202ENST00000377340 WDR78Q5VTH9 848 aa10.13□□□□□ -0.79
CRNKL1-202ENST00000377340 PIGBQ92521 554 aa10.13□□□□□ -0.79
CRNKL1-202ENST00000377340 SMC3Q9UQE7 1217 aa10.13□□□□□ -0.79
CRNKL1-202ENST00000377340 JCADQ9P266 1359 aa10.13□□□□□ -0.79
CRNKL1-202ENST00000377340 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.13□□□□□ -0.79
CRNKL1-202ENST00000377340 PLBD2Q8NHP8 589 aa10.13□□□□□ -0.79
CRNKL1-202ENST00000377340 ZNF594Q96JF6 807 aaPredicted RBP10.13□□□□□ -0.79
CRNKL1-202ENST00000377340 H0YIN7 160 aa10.12□□□□□ -0.79
CRNKL1-202ENST00000377340 CYP27B1O15528 508 aa10.12□□□□□ -0.79
CRNKL1-202ENST00000377340 ECM2O94769 699 aaPredicted RBP10.12□□□□□ -0.79
CRNKL1-202ENST00000377340 RHPN1Q8TCX5 695 aa10.12□□□□□ -0.79
CRNKL1-202ENST00000377340 NAPBQ9H115 298 aa10.12□□□□□ -0.79
CRNKL1-202ENST00000377340 PSMA5P28066 241 aa10.12□□□□□ -0.79
CRNKL1-202ENST00000377340 ECHDC1Q9NTX5 307 aa10.12□□□□□ -0.79
CRNKL1-202ENST00000377340 NPC1L1Q9UHC9 1359 aa10.12□□□□□ -0.79
CRNKL1-202ENST00000377340 CRKLP46109 303 aaKnown RBP10.12□□□□□ -0.79
CRNKL1-202ENST00000377340 TRIM44Q96DX7 344 aaPredicted RBP10.12□□□□□ -0.79
CRNKL1-202ENST00000377340 UBAC1Q9BSL1 405 aa10.12□□□□□ -0.79
CRNKL1-202ENST00000377340 TSHZ2Q9NRE2 1034 aa10.12□□□□□ -0.79
CRNKL1-202ENST00000377340 ALKQ9UM73 1620 aa10.11□□□□□ -0.79
CRNKL1-202ENST00000377340 USP19O94966 1318 aa10.11□□□□□ -0.79
CRNKL1-202ENST00000377340 CCDC82Q8N4S0 544 aa10.11□□□□□ -0.79
CRNKL1-202ENST00000377340 BICC1Q9H694 974 aaKnown RBP10.11□□□□□ -0.79
CRNKL1-202ENST00000377340 RIMS1Q86UR5 1692 aaKnown RBP10.11□□□□□ -0.79
CRNKL1-202ENST00000377340 TIMM10P62072 90 aa10.11□□□□□ -0.79
CRNKL1-202ENST00000377340 PCDHB15Q9Y5E8 787 aa10.11□□□□□ -0.79
CRNKL1-202ENST00000377340 KIDINS220Q9ULH0 1771 aa10.11□□□□□ -0.79
CRNKL1-202ENST00000377340 RANBP6O60518 1105 aaKnown RBP10.11□□□□□ -0.79
CRNKL1-202ENST00000377340 SAFBQ15424 915 aaKnown RBP eCLIP10.11□□□□□ -0.79
CRNKL1-202ENST00000377340 VEZTQ9HBM0 779 aa10.11□□□□□ -0.79
CRNKL1-202ENST00000377340 C1orf167Q5SNV9 1468 aa10.11□□□□□ -0.79
CRNKL1-202ENST00000377340 TAF5LO75529 589 aa10.1□□□□□ -0.79
CRNKL1-202ENST00000377340 ARHGAP45Q92619 1136 aa10.1□□□□□ -0.79
CRNKL1-202ENST00000377340 GLI2P10070 1586 aa10.1□□□□□ -0.79
CRNKL1-202ENST00000377340 IGSF1Q8N6C5 1336 aa10.1□□□□□ -0.79
CRNKL1-202ENST00000377340 NBPF7P0C2Y1 421 aaPredicted RBP10.1□□□□□ -0.79
CRNKL1-202ENST00000377340 EN1Q05925 392 aaPredicted RBP10.1□□□□□ -0.79
CRNKL1-202ENST00000377340 CCDC34Q96HJ3 373 aa10.1□□□□□ -0.79
CRNKL1-202ENST00000377340 METTL22Q9BUU2 404 aaPredicted RBP10.1□□□□□ -0.79
CRNKL1-202ENST00000377340 UPF3BQ9BZI7 483 aaKnown RBP10.1□□□□□ -0.79
CRNKL1-202ENST00000377340 ITGA6P23229 1130 aa10.1□□□□□ -0.79
CRNKL1-202ENST00000377340 HAND2P61296 217 aa10.1□□□□□ -0.79
CRNKL1-202ENST00000377340 PARP10Q53GL7 1025 aa10.1□□□□□ -0.79
CRNKL1-202ENST00000377340 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.1□□□□□ -0.797e-7■■■■□ 21.8
CRNKL1-202ENST00000377340 IQGAP3Q86VI3 1631 aa10.1□□□□□ -0.79
CRNKL1-202ENST00000377340 ARHGEF40Q8TER5 1519 aa10.1□□□□□ -0.79
CRNKL1-202ENST00000377340 PSDA5PKW4 1024 aaPredicted RBP10.1□□□□□ -0.79
CRNKL1-202ENST00000377340 UFL1O94874 794 aa10.1□□□□□ -0.79
CRNKL1-202ENST00000377340 PROSER3Q2NL68 480 aa10.09□□□□□ -0.79
CRNKL1-202ENST00000377340 IPO9Q96P70 1041 aaKnown RBP10.09□□□□□ -0.79
CRNKL1-202ENST00000377340 IGHDP01880 384 aa10.09□□□□□ -0.79
CRNKL1-202ENST00000377340 IL15P40933 162 aaPredicted RBP10.09□□□□□ -0.79
CRNKL1-202ENST00000377340 PICALMQ13492 652 aa10.09□□□□□ -0.79
CRNKL1-202ENST00000377340 SMIM5Q71RC9 77 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms