RNA–Protein interactions for RNA: ENST00000377197.7

C9orf135-201, Transcript of chromosome 9 open reading frame 135, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf135, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-201ENST00000377197 AEBP1Q8IUX7 1158 aa13.61□□□□□ -0.23
C9orf135-201ENST00000377197 MTFR1LQ9H019 292 aa13.61□□□□□ -0.23
C9orf135-201ENST00000377197 C4BP0C0L5 1744 aa13.61□□□□□ -0.23
C9orf135-201ENST00000377197 COL24A1Q17RW2 1714 aa13.61□□□□□ -0.23
C9orf135-201ENST00000377197 ZNF831Q5JPB2 1677 aa13.6□□□□□ -0.23
C9orf135-201ENST00000377197 PLEKHO1Q53GL0 409 aaPredicted RBP13.6□□□□□ -0.23
C9orf135-201ENST00000377197 UBR3Q6ZT12 1888 aa13.6□□□□□ -0.23
C9orf135-201ENST00000377197 ZDHHC16Q969W1 377 aa13.6□□□□□ -0.23
C9orf135-201ENST00000377197 SYT17Q9BSW7 474 aa13.6□□□□□ -0.23
C9orf135-201ENST00000377197 CCNL1Q9UK58 526 aaPredicted RBP13.6□□□□□ -0.23
C9orf135-201ENST00000377197 DIAPH1O60610 1272 aaKnown RBP13.59□□□□□ -0.23
C9orf135-201ENST00000377197 C1QTNF8P60827 252 aa13.59□□□□□ -0.23
C9orf135-201ENST00000377197 ZNF827Q17R98 1081 aa13.59□□□□□ -0.23
C9orf135-201ENST00000377197 AMOTQ4VCS5 1084 aa13.59□□□□□ -0.23
C9orf135-201ENST00000377197 BCL2L12Q9HB09 334 aa13.59□□□□□ -0.23
C9orf135-201ENST00000377197 ARIH1Q9Y4X5 557 aaPredicted RBP13.59□□□□□ -0.23
C9orf135-201ENST00000377197 COL5A3P25940 1745 aaPredicted RBP13.59□□□□□ -0.23
C9orf135-201ENST00000377197 KDM6AO15550 1401 aaPredicted RBP13.58□□□□□ -0.24
C9orf135-201ENST00000377197 HSP90AB1P08238 724 aaKnown RBP13.58□□□□□ -0.24
C9orf135-201ENST00000377197 KCNQ4P56696 695 aa13.58□□□□□ -0.24
C9orf135-201ENST00000377197 ZNF530Q6P9A1 599 aaPredicted RBP13.58□□□□□ -0.24
C9orf135-201ENST00000377197 TMOD3Q9NYL9 352 aa13.58□□□□□ -0.24
C9orf135-201ENST00000377197 ADAMTS7Q9UKP4 1686 aa13.58□□□□□ -0.24
C9orf135-201ENST00000377197 C1orf141Q5JVX7 400 aa13.57□□□□□ -0.24
C9orf135-201ENST00000377197 PIGBQ92521 554 aa13.57□□□□□ -0.24
C9orf135-201ENST00000377197 SMARCC1Q92922 1105 aaPredicted RBP13.57□□□□□ -0.24
C9orf135-201ENST00000377197 ARXQ96QS3 562 aa13.57□□□□□ -0.24
C9orf135-201ENST00000377197 PHF14O94880 888 aa13.56□□□□□ -0.24
C9orf135-201ENST00000377197 HMOX1P09601 288 aa13.56□□□□□ -0.24
C9orf135-201ENST00000377197 DCAF5Q96JK2 942 aa13.56□□□□□ -0.24
C9orf135-201ENST00000377197 CICQ96RK0 1608 aaPredicted RBP13.56□□□□□ -0.24
C9orf135-201ENST00000377197 SPDYE16A6NNV3 312 aaPredicted RBP13.55□□□□□ -0.24
C9orf135-201ENST00000377197 GPR162Q16538 588 aa13.55□□□□□ -0.24
C9orf135-201ENST00000377197 MAP3K5Q99683 1374 aa13.55□□□□□ -0.24
C9orf135-201ENST00000377197 MRC1P22897 1456 aa13.55□□□□□ -0.24
C9orf135-201ENST00000377197 SIPA1L3O60292 1781 aaPredicted RBP13.54□□□□□ -0.24
C9orf135-201ENST00000377197 ERVV-2B6SEH9 535 aa13.54□□□□□ -0.24
C9orf135-201ENST00000377197 GIGYF1O75420 1035 aaPredicted RBP13.54□□□□□ -0.24
C9orf135-201ENST00000377197 HMGB2P26583 209 aaKnown RBP13.54□□□□□ -0.24
C9orf135-201ENST00000377197 TYW1BQ6NUM6 668 aa13.54□□□□□ -0.24
C9orf135-201ENST00000377197 CFAP53Q96M91 514 aa13.54□□□□□ -0.24
C9orf135-201ENST00000377197 TFCP2L1Q9NZI6 479 aa13.54□□□□□ -0.24
C9orf135-201ENST00000377197 PNPLA7Q6ZV29 1317 aa13.54□□□□□ -0.24
C9orf135-201ENST00000377197 TJP1Q07157 1748 aa13.53□□□□□ -0.24
C9orf135-201ENST00000377197 U2SURPO15042 1029 aaKnown RBP13.53□□□□□ -0.24
C9orf135-201ENST00000377197 PPP2R1AP30153 589 aa13.53□□□□□ -0.24
C9orf135-201ENST00000377197 UTRNP46939 3433 aa13.53□□□□□ -0.24
C9orf135-201ENST00000377197 UBR2Q8IWV8 1755 aa13.53□□□□□ -0.24
C9orf135-201ENST00000377197 PTPREP23469 700 aa13.52□□□□□ -0.25
C9orf135-201ENST00000377197 AKAP4Q5JQC9 854 aa13.52□□□□□ -0.25
C9orf135-201ENST00000377197 ADGRD1Q6QNK2 874 aa13.52□□□□□ -0.25
C9orf135-201ENST00000377197 ASAP1Q9ULH1 1129 aa13.52□□□□□ -0.25
C9orf135-201ENST00000377197 DLG5Q8TDM6 1919 aa13.51□□□□□ -0.25
C9orf135-201ENST00000377197 C4AP0C0L4 1744 aa13.51□□□□□ -0.25
C9orf135-201ENST00000377197 LOC102724428A0A0B4J2F2 783 aa13.51□□□□□ -0.25
C9orf135-201ENST00000377197 GRXCR2A6NFK2 248 aa13.51□□□□□ -0.25
C9orf135-201ENST00000377197 SIK1P57059 783 aa13.51□□□□□ -0.25
C9orf135-201ENST00000377197 CABP4P57796 275 aa13.51□□□□□ -0.25
C9orf135-201ENST00000377197 ATG3Q9NT62 314 aa13.51□□□□□ -0.25
C9orf135-201ENST00000377197 POLD1P28340 1107 aa13.5□□□□□ -0.25
C9orf135-201ENST00000377197 NBR1Q14596 966 aa13.5□□□□□ -0.25
C9orf135-201ENST00000377197 IFFO2Q5TF58 517 aa13.5□□□□□ -0.25
C9orf135-201ENST00000377197 ARHGEF1Q92888 912 aaKnown RBP13.5□□□□□ -0.25
C9orf135-201ENST00000377197 AK7Q96M32 723 aa13.5□□□□□ -0.25
C9orf135-201ENST00000377197 MYH14Q7Z406 1995 aaKnown RBP13.5□□□□□ -0.25
C9orf135-201ENST00000377197 COL9A1P20849 921 aa13.49□□□□□ -0.25
C9orf135-201ENST00000377197 MTHFSDQ2M296 383 aaKnown RBP13.49□□□□□ -0.25
C9orf135-201ENST00000377197 SLC16A10Q8TF71 515 aa13.49□□□□□ -0.25
C9orf135-201ENST00000377197 EPAS1Q99814 870 aa13.49□□□□□ -0.25
C9orf135-201ENST00000377197 ATP6V1AP38606 617 aa13.48□□□□□ -0.25
C9orf135-201ENST00000377197 LINC00116Q8NCU8 138 aa13.48□□□□□ -0.25
C9orf135-201ENST00000377197 FBXW7Q969H0 707 aa13.48□□□□□ -0.25
C9orf135-201ENST00000377197 NUDCQ9Y266 331 aa13.48□□□□□ -0.25
C9orf135-201ENST00000377197 ITPK1Q13572 414 aa13.47□□□□□ -0.25
C9orf135-201ENST00000377197 NFATC2IPQ8NCF5 419 aa13.47□□□□□ -0.25
C9orf135-201ENST00000377197 FLAD1Q8NFF5 587 aa13.47□□□□□ -0.25
C9orf135-201ENST00000377197 GAS2L2Q8NHY3 880 aa13.47□□□□□ -0.25
C9orf135-201ENST00000377197 KCPQ6ZWJ8 1503 aa13.46□□□□□ -0.25
C9orf135-201ENST00000377197 RNMTO43148 476 aaKnown RBP13.46□□□□□ -0.25
C9orf135-201ENST00000377197 PRKAR2BP31323 418 aa13.46□□□□□ -0.25
C9orf135-201ENST00000377197 COL23A1Q86Y22 540 aaPredicted RBP13.46□□□□□ -0.25
C9orf135-201ENST00000377197 RSPH6AQ9H0K4 717 aa13.46□□□□□ -0.25
C9orf135-201ENST00000377197 SLC52A2Q9HAB3 445 aa13.46□□□□□ -0.25
C9orf135-201ENST00000377197 VPS9D1Q9Y2B5 631 aa13.46□□□□□ -0.25
C9orf135-201ENST00000377197 U2AF1L5P0DN76 240 aaPredicted RBP13.45□□□□□ -0.26
C9orf135-201ENST00000377197 U2AF1Q01081 240 aaKnown RBP eCLIP13.45□□□□□ -0.26
C9orf135-201ENST00000377197 DDX10Q13206 875 aaKnown RBP13.45□□□□□ -0.26
C9orf135-201ENST00000377197 C6orf132Q5T0Z8 1188 aa13.45□□□□□ -0.26
C9orf135-201ENST00000377197 LGR6Q9HBX8 967 aa13.45□□□□□ -0.26
C9orf135-201ENST00000377197 TK2O00142 265 aa13.44□□□□□ -0.26
C9orf135-201ENST00000377197 GNPATO15228 680 aa13.44□□□□□ -0.26
C9orf135-201ENST00000377197 HRO43593 1189 aa13.44□□□□□ -0.26
C9orf135-201ENST00000377197 SSFA2P28290 1259 aa13.44□□□□□ -0.26
C9orf135-201ENST00000377197 MLLT3P42568 568 aaPredicted RBP13.44□□□□□ -0.26
C9orf135-201ENST00000377197 TSR1Q2NL82 804 aaKnown RBP13.44□□□□□ -0.26
C9orf135-201ENST00000377197 SLC4A9Q96Q91 983 aa13.44□□□□□ -0.26
C9orf135-201ENST00000377197 ZBED2Q9BTP6 218 aa13.44□□□□□ -0.26
C9orf135-201ENST00000377197 CNTNAP4Q9C0A0 1308 aa13.43□□□□□ -0.26
C9orf135-201ENST00000377197 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.43□□□□□ -0.26
C9orf135-201ENST00000377197 GNAT3A8MTJ3 354 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms