RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 MS4A1P11836 297 aa15.88■□□□□ 0.13
VRK3-202ENST00000377011 LRP10Q7Z4F1 713 aa15.88■□□□□ 0.13
VRK3-202ENST00000377011 CD2APQ9Y5K6 639 aa15.88■□□□□ 0.13
VRK3-202ENST00000377011 PXDNLA1KZ92 1463 aa15.88■□□□□ 0.13
VRK3-202ENST00000377011 MYL6BP14649 208 aa15.88■□□□□ 0.13
VRK3-202ENST00000377011 EIF2S2P20042 333 aaKnown RBP15.88■□□□□ 0.13
VRK3-202ENST00000377011 HLFQ16534 295 aa15.88■□□□□ 0.13
VRK3-202ENST00000377011 TTLL7Q6ZT98 887 aa15.88■□□□□ 0.13
VRK3-202ENST00000377011 DZIP3Q86Y13 1208 aaKnown RBP15.88■□□□□ 0.13
VRK3-202ENST00000377011 NRXN2Q9P2S2 1712 aa15.88■□□□□ 0.13
VRK3-202ENST00000377011 A0A0G2JLW4 131 aa15.87■□□□□ 0.13
VRK3-202ENST00000377011 ANP32AP39687 249 aaKnown RBP15.87■□□□□ 0.13
VRK3-202ENST00000377011 EXOC6Q8TAG9 804 aa15.87■□□□□ 0.13
VRK3-202ENST00000377011 PARP3Q9Y6F1 533 aa15.87■□□□□ 0.13
VRK3-202ENST00000377011 CFAP44Q96MT7 982 aa15.86■□□□□ 0.13
VRK3-202ENST00000377011 NOP58Q9Y2X3 529 aaKnown RBP15.86■□□□□ 0.13
VRK3-202ENST00000377011 KCNA3P22001 575 aa15.85■□□□□ 0.13
VRK3-202ENST00000377011 TSR2Q969E8 191 aaKnown RBP15.85■□□□□ 0.13
VRK3-202ENST00000377011 BCL11AQ9H165 835 aa15.85■□□□□ 0.13
VRK3-202ENST00000377011 ANKRD31Q8N7Z5 1873 aa15.85■□□□□ 0.13
VRK3-202ENST00000377011 DPEP1P16444 411 aa15.85■□□□□ 0.13
VRK3-202ENST00000377011 CHRNA5P30532 468 aa15.85■□□□□ 0.13
VRK3-202ENST00000377011 WWC1Q8IX03 1113 aa15.85■□□□□ 0.13
VRK3-202ENST00000377011 ZNF521Q96K83 1311 aa15.85■□□□□ 0.13
VRK3-202ENST00000377011 BRCA1P38398 1863 aaKnown RBP15.84■□□□□ 0.13
VRK3-202ENST00000377011 A0A087WZG4 1122 aa15.84■□□□□ 0.13
VRK3-202ENST00000377011 ELL2O00472 640 aaPredicted RBP15.84■□□□□ 0.13
VRK3-202ENST00000377011 SERPINB2P05120 415 aa15.84■□□□□ 0.13
VRK3-202ENST00000377011 GPR162Q16538 588 aa15.84■□□□□ 0.13
VRK3-202ENST00000377011 TSPYL6Q8N831 410 aa15.84■□□□□ 0.13
VRK3-202ENST00000377011 C8orf58Q8NAV2 365 aa15.84■□□□□ 0.13
VRK3-202ENST00000377011 SPINK5Q9NQ38 1064 aaPredicted RBP15.84■□□□□ 0.13
VRK3-202ENST00000377011 BABAM1Q9NWV8 329 aa15.84■□□□□ 0.13
VRK3-202ENST00000377011 CDCA7LQ96GN5 454 aa15.83■□□□□ 0.13
VRK3-202ENST00000377011 NUP98P52948 1817 aa15.83■□□□□ 0.12
VRK3-202ENST00000377011 IPO9Q96P70 1041 aaKnown RBP15.82■□□□□ 0.12
VRK3-202ENST00000377011 IFT57Q9NWB7 429 aa15.82■□□□□ 0.12
VRK3-202ENST00000377011 ZNF428Q96B54 188 aa15.82■□□□□ 0.12
VRK3-202ENST00000377011 ZBTB3Q9H5J0 574 aa15.82■□□□□ 0.12
VRK3-202ENST00000377011 DUSP27Q5VZP5 1158 aa15.81■□□□□ 0.12
VRK3-202ENST00000377011 PRR5LQ6MZQ0 368 aa15.81■□□□□ 0.12
VRK3-202ENST00000377011 CHPF2Q9P2E5 772 aa15.81■□□□□ 0.12
VRK3-202ENST00000377011 COL11A2P13942 1736 aaPredicted RBP15.8■□□□□ 0.12
VRK3-202ENST00000377011 FAM177BA6PVY3 158 aa15.8■□□□□ 0.12
VRK3-202ENST00000377011 POTEDQ86YR6 584 aa15.8■□□□□ 0.12
VRK3-202ENST00000377011 CCDC27Q2M243 656 aa15.8■□□□□ 0.12
VRK3-202ENST00000377011 GNAI1P63096 354 aa15.79■□□□□ 0.12
VRK3-202ENST00000377011 GOLGA2Q08379 1002 aa15.79■□□□□ 0.12
VRK3-202ENST00000377011 AIMP1Q12904 312 aaKnown RBP15.79■□□□□ 0.12
VRK3-202ENST00000377011 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.79■□□□□ 0.12
VRK3-202ENST00000377011 MAP3K15Q6ZN16 1313 aa15.78■□□□□ 0.12
VRK3-202ENST00000377011 UBN2Q6ZU65 1347 aa15.78■□□□□ 0.12
VRK3-202ENST00000377011 GPTP24298 496 aa15.78■□□□□ 0.12
VRK3-202ENST00000377011 HDGFL1Q5TGJ6 251 aa15.78■□□□□ 0.12
VRK3-202ENST00000377011 COPS6Q7L5N1 327 aa15.78■□□□□ 0.12
VRK3-202ENST00000377011 XAGE3Q8WTP9 111 aa15.78■□□□□ 0.12
VRK3-202ENST00000377011 NIP7Q9Y221 180 aaKnown RBP eCLIP15.78■□□□□ 0.12
VRK3-202ENST00000377011 TGFB2P61812 414 aa15.77■□□□□ 0.12
VRK3-202ENST00000377011 NPM2Q86SE8 214 aaKnown RBP15.77■□□□□ 0.12
VRK3-202ENST00000377011 SETDB2Q96T68 719 aa15.77■□□□□ 0.12
VRK3-202ENST00000377011 CHD4Q14839 1912 aa15.77■□□□□ 0.11
VRK3-202ENST00000377011 TRMT2AQ8IZ69 625 aaKnown RBP15.77■□□□□ 0.11
VRK3-202ENST00000377011 TNRC6CQ9HCJ0 1690 aaKnown RBP15.76■□□□□ 0.11
VRK3-202ENST00000377011 ERBB4Q15303 1308 aa15.76■□□□□ 0.11
VRK3-202ENST00000377011 CLEC4GQ6UXB4 293 aa15.76■□□□□ 0.11
VRK3-202ENST00000377011 PHAXQ9H814 394 aaKnown RBP15.76■□□□□ 0.11
VRK3-202ENST00000377011 DDX21Q9NR30 783 aaKnown RBP eCLIP15.76■□□□□ 0.11
VRK3-202ENST00000377011 BCS1LQ9Y276 419 aa15.76■□□□□ 0.11
VRK3-202ENST00000377011 DLEC1Q9Y238 1755 aa15.75■□□□□ 0.11
VRK3-202ENST00000377011 YY1P25490 414 aa15.75■□□□□ 0.11
VRK3-202ENST00000377011 SLC51AQ86UW1 340 aa15.75■□□□□ 0.11
VRK3-202ENST00000377011 NUTM1Q86Y26 1132 aa15.75■□□□□ 0.11
VRK3-202ENST00000377011 ABCC12Q96J65 1359 aa15.75■□□□□ 0.11
VRK3-202ENST00000377011 SLFN5Q08AF3 891 aa15.74■□□□□ 0.11
VRK3-202ENST00000377011 SUSD4Q5VX71 490 aa15.74■□□□□ 0.11
VRK3-202ENST00000377011 CRBNQ96SW2 442 aa15.74■□□□□ 0.11
VRK3-202ENST00000377011 BACH2Q9BYV9 841 aa15.74■□□□□ 0.11
VRK3-202ENST00000377011 DCAF8L1A6NGE4 600 aa15.74■□□□□ 0.11
VRK3-202ENST00000377011 ERVV-1B6SEH8 477 aa15.74■□□□□ 0.11
VRK3-202ENST00000377011 KIF6Q6ZMV9 814 aa15.74■□□□□ 0.11
VRK3-202ENST00000377011 C2CD5Q86YS7 1000 aa15.74■□□□□ 0.11
VRK3-202ENST00000377011 ZNF34Q8IZ26 560 aa15.74■□□□□ 0.11
VRK3-202ENST00000377011 SYNE4Q8N205 404 aa15.74■□□□□ 0.11
VRK3-202ENST00000377011 CNBD1Q8NA66 436 aa15.74■□□□□ 0.11
VRK3-202ENST00000377011 CACNA1SQ13698 1873 aa15.73■□□□□ 0.11
VRK3-202ENST00000377011 HOXB7P09629 217 aa15.73■□□□□ 0.11
VRK3-202ENST00000377011 PDE4AP27815 886 aa15.73■□□□□ 0.11
VRK3-202ENST00000377011 GIGYF2Q6Y7W6 1299 aaKnown RBP15.73■□□□□ 0.11
VRK3-202ENST00000377011 C3orf67Q6ZVT6 689 aa15.73■□□□□ 0.11
VRK3-202ENST00000377011 NBPF5PQ86XG9 351 aaPredicted RBP15.73■□□□□ 0.11
VRK3-202ENST00000377011 ZBTB47Q9UFB7 747 aaPredicted RBP15.73■□□□□ 0.11
VRK3-202ENST00000377011 ATP10DQ9P241 1426 aa15.73■□□□□ 0.11
VRK3-202ENST00000377011 ARFGEF1Q9Y6D6 1849 aa15.72■□□□□ 0.11
VRK3-202ENST00000377011 CALD1Q05682 793 aaKnown RBP15.72■□□□□ 0.11
VRK3-202ENST00000377011 CENPQQ7L2Z9 268 aaPredicted RBP15.72■□□□□ 0.11
VRK3-202ENST00000377011 KDM2BQ8NHM5 1336 aa15.72■□□□□ 0.11
VRK3-202ENST00000377011 ANKRD36CQ5JPF3 1778 aa15.72■□□□□ 0.11
VRK3-202ENST00000377011 ERFEQ4G0M1 354 aa15.71■□□□□ 0.11
VRK3-202ENST00000377011 G2E3Q7L622 706 aa15.71■□□□□ 0.11
VRK3-202ENST00000377011 BRIP1Q9BX63 1249 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms