RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 PIK3C2BO00750 1634 aa13.31□□□□□ -0.28
HDAC6-203ENST00000376619 PIK3R4Q99570 1358 aa13.31□□□□□ -0.28
HDAC6-203ENST00000376619 CCDC144CPQ8IYA2 1237 aa13.31□□□□□ -0.28
HDAC6-203ENST00000376619 KIF6Q6ZMV9 814 aa13.3□□□□□ -0.28
HDAC6-203ENST00000376619 CCDC24Q8N4L8 307 aa13.3□□□□□ -0.28
HDAC6-203ENST00000376619 FAM227BQ96M60 508 aa13.3□□□□□ -0.28
HDAC6-203ENST00000376619 ZNF592Q92610 1267 aa13.3□□□□□ -0.28
HDAC6-203ENST00000376619 MYOM2P54296 1465 aa13.3□□□□□ -0.28
HDAC6-203ENST00000376619 CHMLP26374 656 aa13.3□□□□□ -0.28
HDAC6-203ENST00000376619 SAMD1Q6SPF0 538 aaPredicted RBP13.3□□□□□ -0.28
HDAC6-203ENST00000376619 KSR2Q6VAB6 950 aa13.3□□□□□ -0.28
HDAC6-203ENST00000376619 FAM89AQ96GI7 184 aa13.3□□□□□ -0.28
HDAC6-203ENST00000376619 HYPKQ9NX55 129 aa13.3□□□□□ -0.28
HDAC6-203ENST00000376619 SOS1Q07889 1333 aaPredicted RBP13.29□□□□□ -0.28
HDAC6-203ENST00000376619 KIF1BO60333 1816 aa13.29□□□□□ -0.28
HDAC6-203ENST00000376619 TRDNQ13061 729 aa13.29□□□□□ -0.28
HDAC6-203ENST00000376619 FAM13BQ9NYF5 915 aa13.29□□□□□ -0.28
HDAC6-203ENST00000376619 R3HCC1Q9Y3T6 440 aaKnown RBP13.29□□□□□ -0.28
HDAC6-203ENST00000376619 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.29□□□□□ -0.28
HDAC6-203ENST00000376619 UNC13BO14795 1591 aa13.29□□□□□ -0.28
HDAC6-203ENST00000376619 EIF4A1P60842 406 aaKnown RBP13.29□□□□□ -0.28
HDAC6-203ENST00000376619 ERC1Q8IUD2 1116 aa13.29□□□□□ -0.28
HDAC6-203ENST00000376619 CKAP2LQ8IYA6 745 aa13.29□□□□□ -0.28
HDAC6-203ENST00000376619 NPHP3Q7Z494 1330 aa13.29□□□□□ -0.28
HDAC6-203ENST00000376619 ZFYVE9O95405 1425 aa13.29□□□□□ -0.28
HDAC6-203ENST00000376619 METTL24Q5JXM2 366 aa13.29□□□□□ -0.28
HDAC6-203ENST00000376619 ZNF790Q6PG37 636 aa13.29□□□□□ -0.28
HDAC6-203ENST00000376619 ATP6V1DQ9Y5K8 247 aa13.29□□□□□ -0.28
HDAC6-203ENST00000376619 ILDR1Q86SU0 546 aaPredicted RBP13.28□□□□□ -0.28
HDAC6-203ENST00000376619 PREX1Q8TCU6 1659 aa13.28□□□□□ -0.28
HDAC6-203ENST00000376619 BECN2A8MW95 431 aa13.28□□□□□ -0.28
HDAC6-203ENST00000376619 SNRPA1P09661 255 aaKnown RBP13.28□□□□□ -0.28
HDAC6-203ENST00000376619 TRMT112Q9UI30 125 aaKnown RBP13.28□□□□□ -0.28
HDAC6-203ENST00000376619 ABCC4O15439 1325 aa13.28□□□□□ -0.28
HDAC6-203ENST00000376619 IFIT1P09914 478 aaKnown RBP13.28□□□□□ -0.28
HDAC6-203ENST00000376619 SUCLG2Q96I99 432 aa13.28□□□□□ -0.28
HDAC6-203ENST00000376619 RTL1A6NKG5 1358 aa13.28□□□□□ -0.28
HDAC6-203ENST00000376619 LMTK2Q8IWU2 1503 aa13.28□□□□□ -0.28
HDAC6-203ENST00000376619 SBNO1A3KN83 1393 aa13.28□□□□□ -0.28
HDAC6-203ENST00000376619 RBM10P98175 930 aaKnown RBP13.28□□□□□ -0.28
HDAC6-203ENST00000376619 FAM43AQ8N2R8 423 aa13.28□□□□□ -0.28
HDAC6-203ENST00000376619 MROH1Q8NDA8 1641 aa13.27□□□□□ -0.28
HDAC6-203ENST00000376619 KCNQ4P56696 695 aa13.27□□□□□ -0.28
HDAC6-203ENST00000376619 TFCP2Q12800 502 aa13.27□□□□□ -0.28
HDAC6-203ENST00000376619 MPHOSPH8Q99549 860 aa13.27□□□□□ -0.28
HDAC6-203ENST00000376619 ADGRB3O60242 1522 aa13.27□□□□□ -0.28
HDAC6-203ENST00000376619 ZNF853P0CG23 659 aa13.27□□□□□ -0.29
HDAC6-203ENST00000376619 CCDC158Q5M9N0 1113 aa13.27□□□□□ -0.29
HDAC6-203ENST00000376619 ZCRB1Q8TBF4 217 aaKnown RBP13.27□□□□□ -0.29
HDAC6-203ENST00000376619 JAG2Q9Y219 1238 aa13.27□□□□□ -0.29
HDAC6-203ENST00000376619 PTMSP20962 102 aa13.27□□□□□ -0.29
HDAC6-203ENST00000376619 SDF4Q9BRK5 362 aa13.27□□□□□ -0.29
HDAC6-203ENST00000376619 SPATA31D1Q6ZQQ2 1576 aa13.27□□□□□ -0.29
HDAC6-203ENST00000376619 LDHAL6AQ6ZMR3 332 aa13.26□□□□□ -0.29
HDAC6-203ENST00000376619 RASSF8Q8NHQ8 419 aa13.26□□□□□ -0.29
HDAC6-203ENST00000376619 ZNF830Q96NB3 372 aaPredicted RBP13.26□□□□□ -0.29
HDAC6-203ENST00000376619 NMIQ13287 307 aaPredicted RBP13.26□□□□□ -0.29
HDAC6-203ENST00000376619 CNPY2Q9Y2B0 182 aa13.26□□□□□ -0.29
HDAC6-203ENST00000376619 RBM8AQ9Y5S9 174 aaKnown RBP13.26□□□□□ -0.29
HDAC6-203ENST00000376619 GJB2P29033 226 aa13.26□□□□□ -0.29
HDAC6-203ENST00000376619 SPHKAPQ2M3C7 1700 aa13.25□□□□□ -0.29
HDAC6-203ENST00000376619 PSMA5P28066 241 aa13.25□□□□□ -0.29
HDAC6-203ENST00000376619 SLFNL1Q499Z3 407 aa13.25□□□□□ -0.29
HDAC6-203ENST00000376619 LINS1Q8NG48 757 aa13.25□□□□□ -0.29
HDAC6-203ENST00000376619 SEC62Q99442 399 aaKnown RBP13.25□□□□□ -0.29
HDAC6-203ENST00000376619 DBNDD2Q9BQY9 259 aa13.25□□□□□ -0.29
HDAC6-203ENST00000376619 AK2P54819 239 aa13.25□□□□□ -0.29
HDAC6-203ENST00000376619 NUP133Q8WUM0 1156 aa13.25□□□□□ -0.29
HDAC6-203ENST00000376619 BRF1Q92994 677 aa13.25□□□□□ -0.29
HDAC6-203ENST00000376619 PES1O00541 588 aaKnown RBP13.24□□□□□ -0.29
HDAC6-203ENST00000376619 CWC22Q9HCG8 908 aaKnown RBP13.24□□□□□ -0.29
HDAC6-203ENST00000376619 WDR33Q9C0J8 1336 aaKnown RBP13.24□□□□□ -0.29
HDAC6-203ENST00000376619 TULP4Q9NRJ4 1543 aa13.24□□□□□ -0.29
HDAC6-203ENST00000376619 ISM2Q6H9L7 571 aa13.24□□□□□ -0.29
HDAC6-203ENST00000376619 GIMAP6Q6P9H5 292 aa13.24□□□□□ -0.29
HDAC6-203ENST00000376619 TTLL7Q6ZT98 887 aa13.24□□□□□ -0.29
HDAC6-203ENST00000376619 FBXO41Q8TF61 875 aa13.24□□□□□ -0.29
HDAC6-203ENST00000376619 TLR7Q9NYK1 1049 aaKnown RBP13.24□□□□□ -0.29
HDAC6-203ENST00000376619 GOLGA6L19H0YKK7 550 aa13.24□□□□□ -0.29
HDAC6-203ENST00000376619 GIGYF1O75420 1035 aaPredicted RBP13.24□□□□□ -0.29
HDAC6-203ENST00000376619 PHF14O94880 888 aa13.24□□□□□ -0.29
HDAC6-203ENST00000376619 ME1P48163 572 aa13.24□□□□□ -0.29
HDAC6-203ENST00000376619 BTG4Q9NY30 223 aa13.24□□□□□ -0.29
HDAC6-203ENST00000376619 LIMCH1Q9UPQ0 1083 aa13.24□□□□□ -0.29
HDAC6-203ENST00000376619 ZC3H13Q5T200 1668 aaKnown RBP13.24□□□□□ -0.29
HDAC6-203ENST00000376619 ESPNB1AK53 854 aa13.24□□□□□ -0.29
HDAC6-203ENST00000376619 RXRAP19793 462 aa13.24□□□□□ -0.29
HDAC6-203ENST00000376619 CHAF1AQ13111 956 aaPredicted RBP13.24□□□□□ -0.29
HDAC6-203ENST00000376619 BRINP3Q76B58 766 aa13.24□□□□□ -0.29
HDAC6-203ENST00000376619 WWC3Q9ULE0 1092 aa13.24□□□□□ -0.29
HDAC6-203ENST00000376619 CIZ1Q9ULV3 898 aaPredicted RBP13.24□□□□□ -0.29
HDAC6-203ENST00000376619 PRIM1P49642 420 aaKnown RBP13.23□□□□□ -0.29
HDAC6-203ENST00000376619 USP25Q9UHP3 1055 aa13.23□□□□□ -0.29
HDAC6-203ENST00000376619 IFIT5Q13325 482 aaKnown RBP13.23□□□□□ -0.29
HDAC6-203ENST00000376619 FAM182BQ5T319 152 aa13.23□□□□□ -0.29
HDAC6-203ENST00000376619 MYO3AQ8NEV4 1616 aa13.23□□□□□ -0.29
HDAC6-203ENST00000376619 MCM2P49736 904 aa13.23□□□□□ -0.29
HDAC6-203ENST00000376619 RBM25P49756 843 aaKnown RBP13.23□□□□□ -0.29
HDAC6-203ENST00000376619 DNM1Q05193 864 aaKnown RBP13.23□□□□□ -0.29
HDAC6-203ENST00000376619 MINDY4BA8MYZ0 360 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms