RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 TRMT112Q9UI30 125 aaKnown RBP12.83□□□□□ -0.35
MDC1-201ENST00000376406 ZMYM4Q5VZL5 1548 aa12.83□□□□□ -0.36
MDC1-201ENST00000376406 ADGRL2O95490 1459 aa12.83□□□□□ -0.36
MDC1-201ENST00000376406 PZPP20742 1482 aa12.83□□□□□ -0.36
MDC1-201ENST00000376406 SYCP1Q15431 976 aa12.83□□□□□ -0.36
MDC1-201ENST00000376406 BICDL1Q6ZP65 573 aa12.83□□□□□ -0.36
MDC1-201ENST00000376406 ZSCAN30Q86W11 494 aa12.83□□□□□ -0.36
MDC1-201ENST00000376406 MAGI2Q86UL8 1455 aa12.83□□□□□ -0.36
MDC1-201ENST00000376406 ARHGEF10O15013 1369 aa12.83□□□□□ -0.36
MDC1-201ENST00000376406 USP5P45974 858 aa12.83□□□□□ -0.36
MDC1-201ENST00000376406 F6X3S4 739 aa12.83□□□□□ -0.36
MDC1-201ENST00000376406 GSTO1P78417 241 aa12.83□□□□□ -0.36
MDC1-201ENST00000376406 SCAND2PQ9GZW5 306 aaPredicted RBP12.83□□□□□ -0.36
MDC1-201ENST00000376406 LIMCH1Q9UPQ0 1083 aa12.83□□□□□ -0.36
MDC1-201ENST00000376406 DDB1Q16531 1140 aa12.83□□□□□ -0.36
MDC1-201ENST00000376406 CCDC152Q4G0S7 254 aa12.82□□□□□ -0.36
MDC1-201ENST00000376406 USHBP1Q8N6Y0 703 aa12.82□□□□□ -0.36
MDC1-201ENST00000376406 STK11IPQ8N1F8 1099 aa12.81□□□□□ -0.36
MDC1-201ENST00000376406 BOLA2Q9H3K6 86 aa12.81□□□□□ -0.36
MDC1-201ENST00000376406 CCDC66A2RUB6 948 aa12.81□□□□□ -0.36
MDC1-201ENST00000376406 SETDB2Q96T68 719 aa12.81□□□□□ -0.36
MDC1-201ENST00000376406 POLR3DP05423 398 aaPredicted RBP12.81□□□□□ -0.36
MDC1-201ENST00000376406 SSFA2P28290 1259 aa12.81□□□□□ -0.36
MDC1-201ENST00000376406 MKNK2Q9HBH9 465 aa12.81□□□□□ -0.36
MDC1-201ENST00000376406 TRAPPC8Q9Y2L5 1435 aa12.81□□□□□ -0.36
MDC1-201ENST00000376406 RBM10P98175 930 aaKnown RBP12.8□□□□□ -0.36
MDC1-201ENST00000376406 HSP90AB2PQ58FF8 381 aa12.8□□□□□ -0.36
MDC1-201ENST00000376406 IQCA1Q86XH1 822 aa12.8□□□□□ -0.36
MDC1-201ENST00000376406 DDX11Q96FC9 970 aa12.8□□□□□ -0.36
MDC1-201ENST00000376406 ABCF2Q9UG63 623 aa12.8□□□□□ -0.36
MDC1-201ENST00000376406 IL2RBP14784 551 aa12.8□□□□□ -0.36
MDC1-201ENST00000376406 CAMK4Q16566 473 aa12.8□□□□□ -0.36
MDC1-201ENST00000376406 ZCCHC11Q5TAX3 1644 aaKnown RBP12.8□□□□□ -0.36
MDC1-201ENST00000376406 CTAGE5O15320 804 aa12.8□□□□□ -0.36
MDC1-201ENST00000376406 IDH1O75874 414 aaKnown RBP12.8□□□□□ -0.36
MDC1-201ENST00000376406 ZNF76P36508 570 aa12.8□□□□□ -0.36
MDC1-201ENST00000376406 MAP3K2Q9Y2U5 619 aa12.8□□□□□ -0.36
MDC1-201ENST00000376406 C8orf37Q96NL8 207 aa12.79□□□□□ -0.36
MDC1-201ENST00000376406 PPP4R3AQ6IN85 833 aa12.79□□□□□ -0.36
MDC1-201ENST00000376406 HDAC9Q9UKV0 1011 aa12.79□□□□□ -0.36
MDC1-201ENST00000376406 HLA-DOAP06340 250 aa12.79□□□□□ -0.36
MDC1-201ENST00000376406 CCDC178Q5BJE1 867 aa12.79□□□□□ -0.36
MDC1-201ENST00000376406 FLT4P35916 1363 aa12.79□□□□□ -0.36
MDC1-201ENST00000376406 RAB34Q9BZG1 259 aa12.79□□□□□ -0.36
MDC1-201ENST00000376406 ANO10Q9NW15 660 aa12.79□□□□□ -0.36
MDC1-201ENST00000376406 HECW2Q9P2P5 1572 aa12.79□□□□□ -0.36
MDC1-201ENST00000376406 TTLL12Q14166 644 aaPredicted RBP12.78□□□□□ -0.36
MDC1-201ENST00000376406 IQCEQ6IPM2 695 aa12.78□□□□□ -0.36
MDC1-201ENST00000376406 ZNF444Q8N0Y2 327 aaPredicted RBP12.78□□□□□ -0.36
MDC1-201ENST00000376406 NAPBQ9H115 298 aa12.78□□□□□ -0.36
MDC1-201ENST00000376406 CUL5Q93034 780 aa12.78□□□□□ -0.36
MDC1-201ENST00000376406 NBPF6Q5VWK0 638 aa12.78□□□□□ -0.36
MDC1-201ENST00000376406 NBPF5PQ86XG9 351 aaPredicted RBP12.78□□□□□ -0.36
MDC1-201ENST00000376406 NBPF4Q96M43 638 aa12.78□□□□□ -0.36
MDC1-201ENST00000376406 DISP1Q96F81 1524 aa12.78□□□□□ -0.36
MDC1-201ENST00000376406 KIF2AO00139 706 aaPredicted RBP12.78□□□□□ -0.36
MDC1-201ENST00000376406 AKAP4Q5JQC9 854 aa12.78□□□□□ -0.36
MDC1-201ENST00000376406 MRPL50Q8N5N7 158 aaKnown RBP12.78□□□□□ -0.36
MDC1-201ENST00000376406 DEF6Q9H4E7 631 aa12.78□□□□□ -0.36
MDC1-201ENST00000376406 C16orf71Q8IYS4 520 aaPredicted RBP12.77□□□□□ -0.36
MDC1-201ENST00000376406 SPINK5Q9NQ38 1064 aaPredicted RBP12.77□□□□□ -0.36
MDC1-201ENST00000376406 FAM83GA6ND36 823 aa12.77□□□□□ -0.36
MDC1-201ENST00000376406 LEKR1Q6ZMV7 388 aa12.77□□□□□ -0.36
MDC1-201ENST00000376406 PHAXQ9H814 394 aaKnown RBP12.77□□□□□ -0.36
MDC1-201ENST00000376406 ECHDC1Q9NTX5 307 aa12.77□□□□□ -0.36
MDC1-201ENST00000376406 NPATQ14207 1427 aa12.77□□□□□ -0.37
MDC1-201ENST00000376406 ERLIN1O75477 346 aa12.77□□□□□ -0.37
MDC1-201ENST00000376406 HMG20BQ9P0W2 317 aa12.77□□□□□ -0.37
MDC1-201ENST00000376406 CCDC12Q8WUD4 166 aaPredicted RBP12.77□□□□□ -0.37
MDC1-201ENST00000376406 CCDC8Q9H0W5 538 aaPredicted RBP12.77□□□□□ -0.37
MDC1-201ENST00000376406 PREX2Q70Z35 1606 aa12.77□□□□□ -0.37
MDC1-201ENST00000376406 C6orf229H3BNL8 230 aa12.77□□□□□ -0.37
MDC1-201ENST00000376406 RRP9O43818 475 aaKnown RBP12.77□□□□□ -0.37
MDC1-201ENST00000376406 RTCBQ9Y3I0 505 aaKnown RBP12.77□□□□□ -0.37
MDC1-201ENST00000376406 PCDH11XQ9BZA7 1347 aa12.76□□□□□ -0.37
MDC1-201ENST00000376406 PCDH11YQ9BZA8 1340 aa12.76□□□□□ -0.37
MDC1-201ENST00000376406 KCNA6P17658 529 aa12.76□□□□□ -0.37
MDC1-201ENST00000376406 OGFOD1Q8N543 542 aa12.76□□□□□ -0.37
MDC1-201ENST00000376406 UQCRFS1P1P0C7P4 283 aa12.76□□□□□ -0.37
MDC1-201ENST00000376406 GJB2P29033 226 aa12.76□□□□□ -0.37
MDC1-201ENST00000376406 C8orf76Q96K31 380 aa12.76□□□□□ -0.37
MDC1-201ENST00000376406 NLRP3Q96P20 1036 aa12.76□□□□□ -0.37
MDC1-201ENST00000376406 STX6O43752 255 aa12.76□□□□□ -0.37
MDC1-201ENST00000376406 EIF3JO75822 258 aaKnown RBP12.75□□□□□ -0.37
MDC1-201ENST00000376406 ERLIN2O94905 339 aa12.75□□□□□ -0.37
MDC1-201ENST00000376406 CCDC181Q5TID7 509 aa12.75□□□□□ -0.37
MDC1-201ENST00000376406 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.75□□□□□ -0.372e-6■■■■■ 68.8
MDC1-201ENST00000376406 ZNF213O14771 459 aa12.75□□□□□ -0.37
MDC1-201ENST00000376406 BAG4O95429 457 aaKnown RBP12.75□□□□□ -0.37
MDC1-201ENST00000376406 NF2P35240 595 aa12.75□□□□□ -0.37
MDC1-201ENST00000376406 MPNDQ8N594 471 aa12.75□□□□□ -0.37
MDC1-201ENST00000376406 TESK2Q96S53 571 aa12.75□□□□□ -0.37
MDC1-201ENST00000376406 DDX19AQ9NUU7 478 aaKnown RBP12.75□□□□□ -0.37
MDC1-201ENST00000376406 PPP1R12BO60237 982 aaPredicted RBP12.75□□□□□ -0.37
MDC1-201ENST00000376406 ATP6V1AP38606 617 aa12.75□□□□□ -0.37
MDC1-201ENST00000376406 SNX21Q969T3 373 aa12.75□□□□□ -0.37
MDC1-201ENST00000376406 TANGO6Q9C0B7 1094 aa12.75□□□□□ -0.37
MDC1-201ENST00000376406 B4DLN1 442 aa12.75□□□□□ -0.37
MDC1-201ENST00000376406 MRPL12P52815 198 aaKnown RBP12.75□□□□□ -0.37
MDC1-201ENST00000376406 PDE4BQ07343 736 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms