RNA–Protein interactions for RNA: ENST00000376395.8

UBQLN1-202, Transcript of ubiquilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN1, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-202ENST00000376395 ZNF165P49910 485 aa17.49■□□□□ 0.39
UBQLN1-202ENST00000376395 ANKRD1Q15327 319 aa17.49■□□□□ 0.39
UBQLN1-202ENST00000376395 DDX46Q7L014 1031 aaKnown RBP17.49■□□□□ 0.39
UBQLN1-202ENST00000376395 ISM2Q6H9L7 571 aa17.48■□□□□ 0.39
UBQLN1-202ENST00000376395 PTGS1P23219 599 aa17.48■□□□□ 0.39
UBQLN1-202ENST00000376395 NMIQ13287 307 aaPredicted RBP17.48■□□□□ 0.39
UBQLN1-202ENST00000376395 ANO6Q4KMQ2 910 aa17.48■□□□□ 0.39
UBQLN1-202ENST00000376395 SH2B1Q9NRF2 756 aaPredicted RBP17.48■□□□□ 0.39
UBQLN1-202ENST00000376395 BRPF1P55201 1214 aaPredicted RBP17.48■□□□□ 0.39
UBQLN1-202ENST00000376395 NFXL1Q6ZNB6 911 aa17.48■□□□□ 0.39
UBQLN1-202ENST00000376395 EDC3Q96F86 508 aaKnown RBP17.48■□□□□ 0.39
UBQLN1-202ENST00000376395 STK38Q15208 465 aa17.47■□□□□ 0.39
UBQLN1-202ENST00000376395 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.47■□□□□ 0.39
UBQLN1-202ENST00000376395 V9GYY5 206 aaPredicted RBP17.47■□□□□ 0.39
UBQLN1-202ENST00000376395 METP08581 1390 aa17.47■□□□□ 0.39
UBQLN1-202ENST00000376395 TET3O43151 1660 aa17.47■□□□□ 0.39
UBQLN1-202ENST00000376395 SGSM2O43147 1006 aa17.47■□□□□ 0.39
UBQLN1-202ENST00000376395 IL17REQ8NFR9 667 aa17.47■□□□□ 0.39
UBQLN1-202ENST00000376395 DNAJC25Q9H1X3 360 aa17.47■□□□□ 0.39
UBQLN1-202ENST00000376395 NLRP1Q9C000 1473 aa17.47■□□□□ 0.39
UBQLN1-202ENST00000376395 CHD1O14646 1710 aa17.47■□□□□ 0.39
UBQLN1-202ENST00000376395 A0A0U1RQG5 324 aaPredicted RBP17.47■□□□□ 0.39
UBQLN1-202ENST00000376395 BIN1O00499 593 aa17.47■□□□□ 0.39
UBQLN1-202ENST00000376395 CLIP2Q9UDT6 1046 aa17.47■□□□□ 0.39
UBQLN1-202ENST00000376395 HS1BP3Q53T59 392 aa17.46■□□□□ 0.39
UBQLN1-202ENST00000376395 CHST3Q7LGC8 479 aa17.46■□□□□ 0.39
UBQLN1-202ENST00000376395 RASSF8Q8NHQ8 419 aa17.46■□□□□ 0.39
UBQLN1-202ENST00000376395 BRF1Q92994 677 aa17.46■□□□□ 0.39
UBQLN1-202ENST00000376395 EVI5LQ96CN4 794 aa17.46■□□□□ 0.39
UBQLN1-202ENST00000376395 TNNT1P13805 278 aa17.46■□□□□ 0.39
UBQLN1-202ENST00000376395 TRIM29Q14134 588 aa17.46■□□□□ 0.39
UBQLN1-202ENST00000376395 UBE3BQ7Z3V4 1068 aa17.46■□□□□ 0.39
UBQLN1-202ENST00000376395 FAM135BQ49AJ0 1406 aa17.46■□□□□ 0.39
UBQLN1-202ENST00000376395 PTH1RQ03431 593 aa17.45■□□□□ 0.38
UBQLN1-202ENST00000376395 SNRKQ9NRH2 765 aa17.45■□□□□ 0.38
UBQLN1-202ENST00000376395 SCAND2PQ9GZW5 306 aaPredicted RBP17.45■□□□□ 0.38
UBQLN1-202ENST00000376395 PRR36Q9H6K5 1346 aa17.45■□□□□ 0.38
UBQLN1-202ENST00000376395 LAMC1P11047 1609 aa17.45■□□□□ 0.38
UBQLN1-202ENST00000376395 NAT10Q9H0A0 1025 aaKnown RBP17.45■□□□□ 0.38
UBQLN1-202ENST00000376395 PHF8Q9UPP1 1060 aa17.45■□□□□ 0.38
UBQLN1-202ENST00000376395 HAND2P61296 217 aa17.44■□□□□ 0.38
UBQLN1-202ENST00000376395 ADCK5Q3MIX3 580 aa17.44■□□□□ 0.38
UBQLN1-202ENST00000376395 PDILTQ8N807 584 aa17.44■□□□□ 0.38
UBQLN1-202ENST00000376395 EFCAB6Q5THR3 1501 aa17.44■□□□□ 0.38
UBQLN1-202ENST00000376395 HSPA4P34932 840 aa17.44■□□□□ 0.38
UBQLN1-202ENST00000376395 CREB3L3Q68CJ9 461 aa17.44■□□□□ 0.38
UBQLN1-202ENST00000376395 THEMISQ8N1K5 641 aaPredicted RBP17.44■□□□□ 0.38
UBQLN1-202ENST00000376395 FLT4P35916 1363 aa17.43■□□□□ 0.38
UBQLN1-202ENST00000376395 RNF17Q9BXT8 1623 aaKnown RBP17.43■□□□□ 0.38
UBQLN1-202ENST00000376395 LRRFIP1Q32MZ4 808 aaKnown RBP17.43■□□□□ 0.38
UBQLN1-202ENST00000376395 MNS1Q8NEH6 495 aa17.43■□□□□ 0.38
UBQLN1-202ENST00000376395 IQSEC2Q5JU85 1478 aa17.43■□□□□ 0.38
UBQLN1-202ENST00000376395 TYRO3Q06418 890 aa17.43■□□□□ 0.38
UBQLN1-202ENST00000376395 RUFY3Q7L099 469 aa17.43■□□□□ 0.38
UBQLN1-202ENST00000376395 HOXC9P31274 260 aa17.43■□□□□ 0.38
UBQLN1-202ENST00000376395 CCDC129Q6ZRS4 1044 aa17.43■□□□□ 0.38
UBQLN1-202ENST00000376395 ERCC4Q92889 916 aaPredicted RBP17.43■□□□□ 0.38
UBQLN1-202ENST00000376395 ZBTB9Q96C00 473 aa17.43■□□□□ 0.38
UBQLN1-202ENST00000376395 CCDC34Q96HJ3 373 aa17.43■□□□□ 0.38
UBQLN1-202ENST00000376395 POLR3DP05423 398 aaPredicted RBP17.42■□□□□ 0.38
UBQLN1-202ENST00000376395 UVSSAQ2YD98 709 aa17.42■□□□□ 0.38
UBQLN1-202ENST00000376395 CHMP4CQ96CF2 233 aa17.42■□□□□ 0.38
UBQLN1-202ENST00000376395 GOLIM4O00461 696 aa17.42■□□□□ 0.38
UBQLN1-202ENST00000376395 UHRF1BP1LA0JNW5 1464 aa17.42■□□□□ 0.38
UBQLN1-202ENST00000376395 TULP4Q9NRJ4 1543 aa17.42■□□□□ 0.38
UBQLN1-202ENST00000376395 RAD50Q92878 1312 aa17.42■□□□□ 0.38
UBQLN1-202ENST00000376395 LARP1Q6PKG0 1096 aaKnown RBP17.42■□□□□ 0.38
UBQLN1-202ENST00000376395 SYTL4Q96C24 671 aaPredicted RBP17.42■□□□□ 0.38
UBQLN1-202ENST00000376395 CFAP45Q9UL16 551 aa17.42■□□□□ 0.38
UBQLN1-202ENST00000376395 IQGAP1P46940 1657 aa17.42■□□□□ 0.38
UBQLN1-202ENST00000376395 A0A087WZG4 1122 aa17.41■□□□□ 0.38
UBQLN1-202ENST00000376395 CDC37L1Q7L3B6 337 aa17.41■□□□□ 0.38
UBQLN1-202ENST00000376395 AK9Q5TCS8 1911 aa17.41■□□□□ 0.38
UBQLN1-202ENST00000376395 PTCH1Q13635 1447 aa17.41■□□□□ 0.38
UBQLN1-202ENST00000376395 LARGE1O95461 756 aa17.41■□□□□ 0.38
UBQLN1-202ENST00000376395 ZNF396Q96N95 335 aaPredicted RBP17.41■□□□□ 0.38
UBQLN1-202ENST00000376395 DDIT3P35638 169 aa17.4■□□□□ 0.38
UBQLN1-202ENST00000376395 COPS6Q7L5N1 327 aa17.4■□□□□ 0.38
UBQLN1-202ENST00000376395 FAM200AQ8TCP9 573 aa17.4■□□□□ 0.38
UBQLN1-202ENST00000376395 ME3Q16798 604 aa17.4■□□□□ 0.38
UBQLN1-202ENST00000376395 NEK1Q96PY6 1258 aa17.4■□□□□ 0.38
UBQLN1-202ENST00000376395 BICC1Q9H694 974 aaKnown RBP17.4■□□□□ 0.38
UBQLN1-202ENST00000376395 GRM8O00222 908 aa17.4■□□□□ 0.38
UBQLN1-202ENST00000376395 TTLL5Q6EMB2 1281 aa17.4■□□□□ 0.38
UBQLN1-202ENST00000376395 SHROOM2Q13796 1616 aa17.4■□□□□ 0.38
UBQLN1-202ENST00000376395 TNNT3P45378 269 aaPredicted RBP17.4■□□□□ 0.38
UBQLN1-202ENST00000376395 AKAP17AQ02040 695 aaKnown RBP17.4■□□□□ 0.38
UBQLN1-202ENST00000376395 RRP12Q5JTH9 1297 aaKnown RBP17.4■□□□□ 0.38
UBQLN1-202ENST00000376395 XAGE3Q8WTP9 111 aa17.39■□□□□ 0.37
UBQLN1-202ENST00000376395 LTKP29376 864 aa17.39■□□□□ 0.37
UBQLN1-202ENST00000376395 Q6ZUG5 572 aa17.39■□□□□ 0.37
UBQLN1-202ENST00000376395 CCDC82Q8N4S0 544 aa17.39■□□□□ 0.37
UBQLN1-202ENST00000376395 FSIP1Q8NA03 581 aa17.39■□□□□ 0.37
UBQLN1-202ENST00000376395 TMX1Q9H3N1 280 aa17.39■□□□□ 0.37
UBQLN1-202ENST00000376395 LRRC7Q96NW7 1537 aa17.39■□□□□ 0.37
UBQLN1-202ENST00000376395 ZNF500O60304 480 aaPredicted RBP17.39■□□□□ 0.37
UBQLN1-202ENST00000376395 LIG1P18858 919 aa17.39■□□□□ 0.37
UBQLN1-202ENST00000376395 HSP90AA4PQ58FG1 418 aa17.39■□□□□ 0.37
UBQLN1-202ENST00000376395 JAK2O60674 1132 aa17.38■□□□□ 0.37
UBQLN1-202ENST00000376395 QRICH2Q9H0J4 1663 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms