RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 STK31Q9BXU1 1019 aa18.36■□□□□ 0.53
MSH5-203ENST00000375750 COL18A1P39060 1754 aa18.35■□□□□ 0.53
MSH5-203ENST00000375750 C17orf53Q8N3J3 647 aaPredicted RBP18.35■□□□□ 0.53
MSH5-203ENST00000375750 PRDM11Q9NQV5 511 aa18.35■□□□□ 0.53
MSH5-203ENST00000375750 MBD3O95983 291 aa18.35■□□□□ 0.53
MSH5-203ENST00000375750 MCCP23508 829 aa18.35■□□□□ 0.53
MSH5-203ENST00000375750 CCDC30Q5VVM6 783 aa18.34■□□□□ 0.53
MSH5-203ENST00000375750 CNPY2Q9Y2B0 182 aa18.34■□□□□ 0.53
MSH5-203ENST00000375750 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.34■□□□□ 0.53
MSH5-203ENST00000375750 EIF4A1P60842 406 aaKnown RBP18.34■□□□□ 0.53
MSH5-203ENST00000375750 TSC1Q92574 1164 aa18.34■□□□□ 0.53
MSH5-203ENST00000375750 CCDC39Q9UFE4 941 aa18.34■□□□□ 0.53
MSH5-203ENST00000375750 CPDO75976 1380 aa18.34■□□□□ 0.53
MSH5-203ENST00000375750 TATP17735 454 aaPredicted RBP18.33■□□□□ 0.53
MSH5-203ENST00000375750 PHAXQ9H814 394 aaKnown RBP18.33■□□□□ 0.53
MSH5-203ENST00000375750 CAMTA1Q9Y6Y1 1673 aa18.33■□□□□ 0.52
MSH5-203ENST00000375750 EIF2S2P20042 333 aaKnown RBP18.33■□□□□ 0.52
MSH5-203ENST00000375750 SRCIN1Q9C0H9 1055 aa18.33■□□□□ 0.52
MSH5-203ENST00000375750 CRYBG1Q9Y4K1 1723 aa18.32■□□□□ 0.52
MSH5-203ENST00000375750 USP44Q9H0E7 712 aa18.32■□□□□ 0.52
MSH5-203ENST00000375750 TCHHQ07283 1943 aa18.32■□□□□ 0.52
MSH5-203ENST00000375750 DDX54Q8TDD1 881 aaKnown RBP18.32■□□□□ 0.52
MSH5-203ENST00000375750 USP25Q9UHP3 1055 aa18.32■□□□□ 0.52
MSH5-203ENST00000375750 HDGFL1Q5TGJ6 251 aa18.31■□□□□ 0.52
MSH5-203ENST00000375750 LMO7Q8WWI1 1683 aa18.31■□□□□ 0.52
MSH5-203ENST00000375750 MEGF6O75095 1541 aa18.31■□□□□ 0.52
MSH5-203ENST00000375750 MCM2P49736 904 aa18.31■□□□□ 0.52
MSH5-203ENST00000375750 RASEFQ8IZ41 740 aa18.31■□□□□ 0.52
MSH5-203ENST00000375750 GNAI3P08754 354 aa18.3■□□□□ 0.52
MSH5-203ENST00000375750 RPAP1Q9BWH6 1393 aaPredicted RBP18.3■□□□□ 0.52
MSH5-203ENST00000375750 SURF6O75683 361 aaKnown RBP18.3■□□□□ 0.52
MSH5-203ENST00000375750 INTS4Q96HW7 963 aaKnown RBP18.3■□□□□ 0.52
MSH5-203ENST00000375750 SPG7Q9UQ90 795 aa18.3■□□□□ 0.52
MSH5-203ENST00000375750 TTC12Q9H892 705 aaPredicted RBP18.29■□□□□ 0.52
MSH5-203ENST00000375750 STAP2Q9UGK3 403 aa18.29■□□□□ 0.52
MSH5-203ENST00000375750 FAM177BA6PVY3 158 aa18.29■□□□□ 0.52
MSH5-203ENST00000375750 HCLS1P14317 486 aaPredicted RBP18.29■□□□□ 0.52
MSH5-203ENST00000375750 PHKG2P15735 406 aa18.29■□□□□ 0.52
MSH5-203ENST00000375750 TOM1L2Q6ZVM7 507 aa18.29■□□□□ 0.52
MSH5-203ENST00000375750 LARGE1O95461 756 aa18.28■□□□□ 0.52
MSH5-203ENST00000375750 ANAPC15P60006 121 aa18.28■□□□□ 0.52
MSH5-203ENST00000375750 PPP1R42Q7Z4L9 355 aa18.28■□□□□ 0.52
MSH5-203ENST00000375750 FAM208AQ9UK61 1670 aaKnown RBP18.28■□□□□ 0.52
MSH5-203ENST00000375750 UBTFL1P0CB47 393 aaPredicted RBP18.28■□□□□ 0.52
MSH5-203ENST00000375750 HSPA4P34932 840 aa18.28■□□□□ 0.52
MSH5-203ENST00000375750 PLCB2Q00722 1185 aa18.28■□□□□ 0.52
MSH5-203ENST00000375750 SNX14Q9Y5W7 946 aa18.28■□□□□ 0.52
MSH5-203ENST00000375750 FIBPO43427 364 aa18.27■□□□□ 0.52
MSH5-203ENST00000375750 AK2P54819 239 aa18.27■□□□□ 0.52
MSH5-203ENST00000375750 STRN4Q9NRL3 753 aa18.27■□□□□ 0.52
MSH5-203ENST00000375750 PRAMEF22A3QJZ6 481 aa18.27■□□□□ 0.51
MSH5-203ENST00000375750 CYP27B1O15528 508 aa18.27■□□□□ 0.51
MSH5-203ENST00000375750 ANXA1P04083 346 aa18.27■□□□□ 0.51
MSH5-203ENST00000375750 CWC27Q6UX04 472 aaKnown RBP18.27■□□□□ 0.51
MSH5-203ENST00000375750 SOS1Q07889 1333 aaPredicted RBP18.26■□□□□ 0.51
MSH5-203ENST00000375750 TERF1P54274 439 aa18.26■□□□□ 0.51
MSH5-203ENST00000375750 DNTTIP2Q5QJE6 756 aaKnown RBP18.26■□□□□ 0.51
MSH5-203ENST00000375750 RUFY3Q7L099 469 aa18.26■□□□□ 0.51
MSH5-203ENST00000375750 NFATC2IPQ8NCF5 419 aa18.26■□□□□ 0.51
MSH5-203ENST00000375750 WDR33Q9C0J8 1336 aaKnown RBP18.26■□□□□ 0.51
MSH5-203ENST00000375750 SLC39A6Q13433 755 aa18.26■□□□□ 0.51
MSH5-203ENST00000375750 IFNL2Q8IZJ0 200 aa18.26■□□□□ 0.51
MSH5-203ENST00000375750 PI4K2BQ8TCG2 481 aa18.26■□□□□ 0.51
MSH5-203ENST00000375750 CHPF2Q9P2E5 772 aa18.26■□□□□ 0.51
MSH5-203ENST00000375750 TUBGCP6Q96RT7 1819 aa18.26■□□□□ 0.51
MSH5-203ENST00000375750 WDR17Q8IZU2 1322 aa18.26■□□□□ 0.51
MSH5-203ENST00000375750 NBPF7P0C2Y1 421 aaPredicted RBP18.25■□□□□ 0.51
MSH5-203ENST00000375750 SYAP1Q96A49 352 aaPredicted RBP18.25■□□□□ 0.51
MSH5-203ENST00000375750 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.25■□□□□ 0.513e-7■■□□□ 13.8
MSH5-203ENST00000375750 ADCY5O95622 1261 aa18.25■□□□□ 0.51
MSH5-203ENST00000375750 SYT1P21579 422 aa18.25■□□□□ 0.51
MSH5-203ENST00000375750 CSPP1Q1MSJ5 1256 aa18.25■□□□□ 0.51
MSH5-203ENST00000375750 GIMAP6Q6P9H5 292 aa18.25■□□□□ 0.51
MSH5-203ENST00000375750 KDM6AO15550 1401 aaPredicted RBP18.24■□□□□ 0.51
MSH5-203ENST00000375750 KIAA2012Q0VF49 1180 aa18.24■□□□□ 0.51
MSH5-203ENST00000375750 LARP1Q6PKG0 1096 aaKnown RBP18.24■□□□□ 0.51
MSH5-203ENST00000375750 SASS6Q6UVJ0 657 aa18.24■□□□□ 0.51
MSH5-203ENST00000375750 RHPN1Q8TCX5 695 aa18.24■□□□□ 0.51
MSH5-203ENST00000375750 SRGAP3O43295 1099 aa18.24■□□□□ 0.51
MSH5-203ENST00000375750 GIGYF1O75420 1035 aaPredicted RBP18.24■□□□□ 0.51
MSH5-203ENST00000375750 MCM5P33992 734 aa18.24■□□□□ 0.51
MSH5-203ENST00000375750 EVA1CP58658 441 aa18.24■□□□□ 0.51
MSH5-203ENST00000375750 COL9A3Q14050 684 aaPredicted RBP18.24■□□□□ 0.51
MSH5-203ENST00000375750 SLC52A2Q9HAB3 445 aa18.24■□□□□ 0.51
MSH5-203ENST00000375750 KDM3BQ7LBC6 1761 aa18.23■□□□□ 0.51
MSH5-203ENST00000375750 SGSM2O43147 1006 aa18.23■□□□□ 0.51
MSH5-203ENST00000375750 LSG1Q9H089 658 aaKnown RBP18.23■□□□□ 0.51
MSH5-203ENST00000375750 ABCC6O95255 1503 aa18.23■□□□□ 0.51
MSH5-203ENST00000375750 AP5Z1O43299 807 aa18.23■□□□□ 0.51
MSH5-203ENST00000375750 ZSCAN22P10073 491 aaPredicted RBP18.23■□□□□ 0.51
MSH5-203ENST00000375750 SSH3Q8TE77 659 aa18.23■□□□□ 0.51
MSH5-203ENST00000375750 TTC14Q96N46 770 aa18.23■□□□□ 0.51
MSH5-203ENST00000375750 COL5A2P05997 1499 aaPredicted RBP18.23■□□□□ 0.51
MSH5-203ENST00000375750 OVOS2A0A0G2JMS6 1433 aa18.22■□□□□ 0.51
MSH5-203ENST00000375750 CCDC83Q8IWF9 413 aa18.22■□□□□ 0.51
MSH5-203ENST00000375750 NHSL1Q5SYE7 1610 aa18.22■□□□□ 0.51
MSH5-203ENST00000375750 HOXB7P09629 217 aa18.22■□□□□ 0.51
MSH5-203ENST00000375750 PTH1RQ03431 593 aa18.22■□□□□ 0.51
MSH5-203ENST00000375750 ADCK5Q3MIX3 580 aa18.22■□□□□ 0.51
MSH5-203ENST00000375750 CHMP3Q9Y3E7 222 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms