RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 BCS1LQ9Y276 419 aa22.36■■□□□ 1.17
PFDN6-201ENST00000374606 C10orf71Q711Q0 1435 aa22.36■■□□□ 1.17
PFDN6-201ENST00000374606 COL5A3P25940 1745 aaPredicted RBP22.35■■□□□ 1.17
PFDN6-201ENST00000374606 DNAJC10Q8IXB1 793 aa22.35■■□□□ 1.17
PFDN6-201ENST00000374606 DBF4Q9UBU7 674 aaPredicted RBP22.35■■□□□ 1.17
PFDN6-201ENST00000374606 USP16Q9Y5T5 823 aa22.35■■□□□ 1.17
PFDN6-201ENST00000374606 ERBB4Q15303 1308 aa22.34■■□□□ 1.17
PFDN6-201ENST00000374606 SLC4A2P04920 1241 aa22.34■■□□□ 1.17
PFDN6-201ENST00000374606 NLGN1Q8N2Q7 840 aa22.34■■□□□ 1.17
PFDN6-201ENST00000374606 SLC4A9Q96Q91 983 aa22.34■■□□□ 1.17
PFDN6-201ENST00000374606 RTCBQ9Y3I0 505 aaKnown RBP22.34■■□□□ 1.17
PFDN6-201ENST00000374606 STARD3NLO95772 234 aa22.33■■□□□ 1.17
PFDN6-201ENST00000374606 NEFLP07196 543 aa22.33■■□□□ 1.17
PFDN6-201ENST00000374606 TRAPPC3LQ5T215 181 aa22.33■■□□□ 1.17
PFDN6-201ENST00000374606 ZKSCAN2Q63HK3 967 aa22.33■■□□□ 1.17
PFDN6-201ENST00000374606 A0A0G2JLW4 131 aa22.32■■□□□ 1.16
PFDN6-201ENST00000374606 IPO8O15397 1037 aaKnown RBP22.32■■□□□ 1.16
PFDN6-201ENST00000374606 PLIN1O60240 522 aa22.32■■□□□ 1.16
PFDN6-201ENST00000374606 ARHGAP27Q6ZUM4 889 aa22.32■■□□□ 1.16
PFDN6-201ENST00000374606 CCDC87Q9NVE4 849 aa22.32■■□□□ 1.16
PFDN6-201ENST00000374606 NOB1Q9ULX3 412 aaKnown RBP22.32■■□□□ 1.16
PFDN6-201ENST00000374606 DNAJC5GQ8N7S2 189 aa22.31■■□□□ 1.16
PFDN6-201ENST00000374606 DDX21Q9NR30 783 aaKnown RBP eCLIP22.31■■□□□ 1.16
PFDN6-201ENST00000374606 C4AP0C0L4 1744 aa22.31■■□□□ 1.16
PFDN6-201ENST00000374606 ADRA2BP18089 450 aa22.3■■□□□ 1.16
PFDN6-201ENST00000374606 NMRK2Q9NPI5 230 aa22.3■■□□□ 1.16
PFDN6-201ENST00000374606 HYPKQ9NX55 129 aa22.3■■□□□ 1.16
PFDN6-201ENST00000374606 PTPRCP08575 1304 aa22.3■■□□□ 1.16
PFDN6-201ENST00000374606 BRCA1P38398 1863 aaKnown RBP22.29■■□□□ 1.16
PFDN6-201ENST00000374606 ANXA1P04083 346 aa22.29■■□□□ 1.16
PFDN6-201ENST00000374606 DPEP1P16444 411 aa22.29■■□□□ 1.16
PFDN6-201ENST00000374606 PROSER3Q2NL68 480 aa22.29■■□□□ 1.16
PFDN6-201ENST00000374606 WDR90Q96KV7 1748 aa22.28■■□□□ 1.16
PFDN6-201ENST00000374606 CYP19A1P11511 503 aaPredicted RBP22.28■■□□□ 1.16
PFDN6-201ENST00000374606 FLIIQ13045 1269 aa22.28■■□□□ 1.16
PFDN6-201ENST00000374606 RC3H1Q5TC82 1133 aaKnown RBP22.28■■□□□ 1.16
PFDN6-201ENST00000374606 ATF7IPQ6VMQ6 1270 aa22.28■■□□□ 1.16
PFDN6-201ENST00000374606 G2E3Q7L622 706 aa22.28■■□□□ 1.16
PFDN6-201ENST00000374606 ARHGAP45Q92619 1136 aa22.28■■□□□ 1.16
PFDN6-201ENST00000374606 API5Q9BZZ5 524 aaKnown RBP22.28■■□□□ 1.16
PFDN6-201ENST00000374606 CNTNAP4Q9C0A0 1308 aa22.28■■□□□ 1.16
PFDN6-201ENST00000374606 MS4A1P11836 297 aa22.27■■□□□ 1.16
PFDN6-201ENST00000374606 MYL6BP14649 208 aa22.27■■□□□ 1.16
PFDN6-201ENST00000374606 PDIA6Q15084 440 aa22.27■■□□□ 1.16
PFDN6-201ENST00000374606 RBM46Q8TBY0 533 aaKnown RBP22.27■■□□□ 1.16
PFDN6-201ENST00000374606 ARHGEF1Q92888 912 aaKnown RBP22.27■■□□□ 1.16
PFDN6-201ENST00000374606 PARP3Q9Y6F1 533 aa22.27■■□□□ 1.16
PFDN6-201ENST00000374606 A1BGP04217 495 aa22.26■■□□□ 1.15
PFDN6-201ENST00000374606 GYS1P13807 737 aa22.26■■□□□ 1.15
PFDN6-201ENST00000374606 TRIM27P14373 513 aa22.26■■□□□ 1.15
PFDN6-201ENST00000374606 RFC4P35249 363 aa22.26■■□□□ 1.15
PFDN6-201ENST00000374606 FTSJ3Q8IY81 847 aaKnown RBP22.26■■□□□ 1.15
PFDN6-201ENST00000374606 PHAXQ9H814 394 aaKnown RBP22.26■■□□□ 1.15
PFDN6-201ENST00000374606 ARFGEF1Q9Y6D6 1849 aa22.26■■□□□ 1.15
PFDN6-201ENST00000374606 PIP4K2AP48426 406 aaPredicted RBP22.25■■□□□ 1.15
PFDN6-201ENST00000374606 IRX6P78412 446 aaPredicted RBP22.25■■□□□ 1.15
PFDN6-201ENST00000374606 FKBP5Q13451 457 aaPredicted RBP22.25■■□□□ 1.15
PFDN6-201ENST00000374606 C9orf131Q5VYM1 1079 aa22.25■■□□□ 1.15
PFDN6-201ENST00000374606 C16orf71Q8IYS4 520 aaPredicted RBP22.25■■□□□ 1.15
PFDN6-201ENST00000374606 NBPF26B4DH59 902 aa22.24■■□□□ 1.15
PFDN6-201ENST00000374606 RPS6KA4O75676 772 aa22.24■■□□□ 1.15
PFDN6-201ENST00000374606 CRKLP46109 303 aaKnown RBP22.24■■□□□ 1.15
PFDN6-201ENST00000374606 PDE3AQ14432 1141 aa22.24■■□□□ 1.15
PFDN6-201ENST00000374606 NBPF10Q6P3W6 841 aaKnown RBP22.24■■□□□ 1.15
PFDN6-201ENST00000374606 NBPF15Q8N660 670 aa22.24■■□□□ 1.15
PFDN6-201ENST00000374606 CLUAP1Q96AJ1 413 aa22.24■■□□□ 1.15
PFDN6-201ENST00000374606 DZIP1LQ8IYY4 767 aaKnown RBP22.23■■□□□ 1.15
PFDN6-201ENST00000374606 TNNQ9UQP3 1299 aa22.23■■□□□ 1.15
PFDN6-201ENST00000374606 ZBTB1Q9Y2K1 713 aa22.23■■□□□ 1.15
PFDN6-201ENST00000374606 MYH14Q7Z406 1995 aaKnown RBP22.22■■□□□ 1.15
PFDN6-201ENST00000374606 C20orf194Q5TEA3 1177 aa22.22■■□□□ 1.15
PFDN6-201ENST00000374606 LRP10Q7Z4F1 713 aa22.22■■□□□ 1.15
PFDN6-201ENST00000374606 ABCC4O15439 1325 aa22.22■■□□□ 1.15
PFDN6-201ENST00000374606 DDX58O95786 925 aaKnown RBP22.21■■□□□ 1.15
PFDN6-201ENST00000374606 FSTL1Q12841 308 aa22.21■■□□□ 1.15
PFDN6-201ENST00000374606 XAGE3Q8WTP9 111 aa22.21■■□□□ 1.15
PFDN6-201ENST00000374606 KLRG1Q96E93 195 aa22.21■■□□□ 1.15
PFDN6-201ENST00000374606 PIM2Q9P1W9 311 aa22.21■■□□□ 1.15
PFDN6-201ENST00000374606 ZNF330Q9Y3S2 320 aaPredicted RBP22.21■■□□□ 1.15
PFDN6-201ENST00000374606 ARFGEF2Q9Y6D5 1785 aa22.2■■□□□ 1.14
PFDN6-201ENST00000374606 KCNA3P22001 575 aa22.2■■□□□ 1.14
PFDN6-201ENST00000374606 AIMP1Q12904 312 aaKnown RBP22.2■■□□□ 1.14
PFDN6-201ENST00000374606 INTS5Q6P9B9 1019 aaKnown RBP22.2■■□□□ 1.14
PFDN6-201ENST00000374606 COPS6Q7L5N1 327 aa22.2■■□□□ 1.14
PFDN6-201ENST00000374606 PANK1Q8TE04 598 aa22.2■■□□□ 1.14
PFDN6-201ENST00000374606 KDM2BQ8NHM5 1336 aa22.2■■□□□ 1.14
PFDN6-201ENST00000374606 RLBP1P12271 317 aa22.19■■□□□ 1.14
PFDN6-201ENST00000374606 IL6STP40189 918 aaPredicted RBP22.19■■□□□ 1.14
PFDN6-201ENST00000374606 DALRD3Q5D0E6 543 aaKnown RBP22.19■■□□□ 1.14
PFDN6-201ENST00000374606 NPM2Q86SE8 214 aaKnown RBP22.19■■□□□ 1.14
PFDN6-201ENST00000374606 FKBP8Q14318 412 aa22.18■■□□□ 1.14
PFDN6-201ENST00000374606 JMYQ8N9B5 988 aa22.17■■□□□ 1.14
PFDN6-201ENST00000374606 CRBNQ96SW2 442 aa22.17■■□□□ 1.14
PFDN6-201ENST00000374606 RNF181Q9P0P0 153 aa22.17■■□□□ 1.14
PFDN6-201ENST00000374606 PI4KAP2A4QPH2 592 aa22.16■■□□□ 1.14
PFDN6-201ENST00000374606 F6X3S4 739 aa22.16■■□□□ 1.14
PFDN6-201ENST00000374606 HTRA3P83110 453 aa22.16■■□□□ 1.14
PFDN6-201ENST00000374606 SLC4A10Q6U841 1118 aa22.16■■□□□ 1.14
PFDN6-201ENST00000374606 KSR2Q6VAB6 950 aa22.16■■□□□ 1.14
PFDN6-201ENST00000374606 TMEM57Q8N5G2 664 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms