RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 FCHSD2O94868 740 aa15.31■□□□□ 0.04
PRPF4-201ENST00000374198 GNAI1P63096 354 aa15.31■□□□□ 0.04
PRPF4-201ENST00000374198 NRXN1Q9ULB1 1477 aa15.31■□□□□ 0.04
PRPF4-201ENST00000374198 USP27XA6NNY8 438 aa15.31■□□□□ 0.04
PRPF4-201ENST00000374198 DNM1Q05193 864 aaKnown RBP15.31■□□□□ 0.04
PRPF4-201ENST00000374198 THUMPD2Q9BTF0 503 aaKnown RBP15.31■□□□□ 0.04
PRPF4-201ENST00000374198 CLIP2Q9UDT6 1046 aa15.31■□□□□ 0.04
PRPF4-201ENST00000374198 IFT172Q9UG01 1749 aa15.31■□□□□ 0.04
PRPF4-201ENST00000374198 SSH2Q76I76 1423 aa15.31■□□□□ 0.04
PRPF4-201ENST00000374198 HTATSF1O43719 755 aaKnown RBP15.3■□□□□ 0.04
PRPF4-201ENST00000374198 TXLNBQ8N3L3 684 aa15.3■□□□□ 0.04
PRPF4-201ENST00000374198 SECISBP2LQ93073 1101 aaKnown RBP15.3■□□□□ 0.04
PRPF4-201ENST00000374198 MBIPQ9NS73 344 aa15.3■□□□□ 0.04
PRPF4-201ENST00000374198 GEMIN8Q9NWZ8 242 aaKnown RBP15.3■□□□□ 0.04
PRPF4-201ENST00000374198 PTPRCP08575 1304 aa15.3■□□□□ 0.04
PRPF4-201ENST00000374198 RAD50Q92878 1312 aa15.3■□□□□ 0.04
PRPF4-201ENST00000374198 NOP2P46087 812 aaKnown RBP15.3■□□□□ 0.04
PRPF4-201ENST00000374198 CCDC144BQ3MJ40 725 aa15.3■□□□□ 0.04
PRPF4-201ENST00000374198 CCDC144CPQ8IYA2 1237 aa15.3■□□□□ 0.04
PRPF4-201ENST00000374198 PUS7Q96PZ0 661 aaKnown RBP15.3■□□□□ 0.04
PRPF4-201ENST00000374198 ANO6Q4KMQ2 910 aa15.3■□□□□ 0.04
PRPF4-201ENST00000374198 TEX35Q5T0J7 233 aa15.3■□□□□ 0.04
PRPF4-201ENST00000374198 LRRC8AQ8IWT6 810 aa15.3■□□□□ 0.04
PRPF4-201ENST00000374198 NUP62CLQ9H1M0 184 aa15.3■□□□□ 0.04
PRPF4-201ENST00000374198 GGNBP2Q9H3C7 697 aa15.3■□□□□ 0.04
PRPF4-201ENST00000374198 CHMLP26374 656 aa15.29■□□□□ 0.04
PRPF4-201ENST00000374198 PLA2G4AP47712 749 aa15.29■□□□□ 0.04
PRPF4-201ENST00000374198 NFATC2IPQ8NCF5 419 aa15.29■□□□□ 0.04
PRPF4-201ENST00000374198 TDRD7Q8NHU6 1098 aaKnown RBP15.29■□□□□ 0.04
PRPF4-201ENST00000374198 NPHP1O15259 732 aa15.29■□□□□ 0.04
PRPF4-201ENST00000374198 ZNF853P0CG23 659 aa15.29■□□□□ 0.04
PRPF4-201ENST00000374198 PNMA6AP0CW24 399 aaPredicted RBP15.29■□□□□ 0.04
PRPF4-201ENST00000374198 C8orf58Q8NAV2 365 aa15.29■□□□□ 0.04
PRPF4-201ENST00000374198 NEK11Q8NG66 645 aa15.29■□□□□ 0.04
PRPF4-201ENST00000374198 NEMFO60524 1076 aa15.28■□□□□ 0.04
PRPF4-201ENST00000374198 CDC25BP30305 580 aa15.28■□□□□ 0.04
PRPF4-201ENST00000374198 PRKAR2BP31323 418 aa15.28■□□□□ 0.04
PRPF4-201ENST00000374198 CAMK4Q16566 473 aa15.28■□□□□ 0.04
PRPF4-201ENST00000374198 STK26Q9P289 416 aa15.28■□□□□ 0.04
PRPF4-201ENST00000374198 SMC3Q9UQE7 1217 aa15.28■□□□□ 0.04
PRPF4-201ENST00000374198 SYT10Q6XYQ8 523 aa15.28■□□□□ 0.04
PRPF4-201ENST00000374198 XRN1Q8IZH2 1706 aaKnown RBP15.28■□□□□ 0.04
PRPF4-201ENST00000374198 CLCN6P51797 869 aa15.27■□□□□ 0.04
PRPF4-201ENST00000374198 NFE2L2Q16236 605 aa15.27■□□□□ 0.04
PRPF4-201ENST00000374198 TMEM132EQ6IEE7 984 aa15.27■□□□□ 0.04
PRPF4-201ENST00000374198 DHX16O60231 1041 aaKnown RBP15.27■□□□□ 0.03
PRPF4-201ENST00000374198 ERCC6LQ2NKX8 1250 aa15.27■□□□□ 0.03
PRPF4-201ENST00000374198 KRBA2Q6ZNG9 492 aa15.27■□□□□ 0.03
PRPF4-201ENST00000374198 EVC2Q86UK5 1308 aa15.27■□□□□ 0.03
PRPF4-201ENST00000374198 ATF3P18847 181 aa15.26■□□□□ 0.03
PRPF4-201ENST00000374198 TSHZ3Q63HK5 1081 aa15.26■□□□□ 0.03
PRPF4-201ENST00000374198 C19orf44Q9H6X5 657 aa15.26■□□□□ 0.03
PRPF4-201ENST00000374198 SETD1AO15047 1707 aaKnown RBP15.26■□□□□ 0.03
PRPF4-201ENST00000374198 PNPLA6Q8IY17 1366 aa15.26■□□□□ 0.03
PRPF4-201ENST00000374198 HSPA4P34932 840 aa15.26■□□□□ 0.03
PRPF4-201ENST00000374198 TPM4P67936 248 aa15.26■□□□□ 0.03
PRPF4-201ENST00000374198 CTR9Q6PD62 1173 aa15.26■□□□□ 0.03
PRPF4-201ENST00000374198 POLKQ9UBT6 870 aa15.26■□□□□ 0.03
PRPF4-201ENST00000374198 MTMR6Q9Y217 621 aa15.26■□□□□ 0.03
PRPF4-201ENST00000374198 SKILP12757 684 aa15.25■□□□□ 0.03
PRPF4-201ENST00000374198 CKAP2LQ8IYA6 745 aa15.25■□□□□ 0.03
PRPF4-201ENST00000374198 TNMDQ9H2S6 317 aa15.25■□□□□ 0.03
PRPF4-201ENST00000374198 MYO1CO00159 1063 aa15.25■□□□□ 0.03
PRPF4-201ENST00000374198 HMMRO75330 724 aa15.25■□□□□ 0.03
PRPF4-201ENST00000374198 LIG1P18858 919 aa15.25■□□□□ 0.03
PRPF4-201ENST00000374198 KRT24Q2M2I5 525 aa15.25■□□□□ 0.03
PRPF4-201ENST00000374198 LIMCH1Q9UPQ0 1083 aa15.25■□□□□ 0.03
PRPF4-201ENST00000374198 KIF2AO00139 706 aaPredicted RBP15.24■□□□□ 0.03
PRPF4-201ENST00000374198 EPB41L2O43491 1005 aaKnown RBP15.24■□□□□ 0.03
PRPF4-201ENST00000374198 CASQ1P31415 396 aa15.24■□□□□ 0.03
PRPF4-201ENST00000374198 ARID5BQ14865 1188 aa15.24■□□□□ 0.03
PRPF4-201ENST00000374198 C10orf67Q8IYJ2 551 aa15.24■□□□□ 0.03
PRPF4-201ENST00000374198 CCAR2Q8N163 923 aaKnown RBP15.24■□□□□ 0.03
PRPF4-201ENST00000374198 RILPL2Q969X0 211 aa15.24■□□□□ 0.03
PRPF4-201ENST00000374198 PHACTR3Q96KR7 559 aa15.24■□□□□ 0.03
PRPF4-201ENST00000374198 TTC14Q96N46 770 aa15.24■□□□□ 0.03
PRPF4-201ENST00000374198 C14orf93Q9H972 538 aaKnown RBP15.24■□□□□ 0.03
PRPF4-201ENST00000374198 TRMT1Q9NXH9 659 aaKnown RBP15.24■□□□□ 0.03
PRPF4-201ENST00000374198 CHMP3Q9Y3E7 222 aa15.24■□□□□ 0.03
PRPF4-201ENST00000374198 POLR3GO15318 223 aaPredicted RBP15.24■□□□□ 0.03
PRPF4-201ENST00000374198 HSPA1LP34931 641 aa15.24■□□□□ 0.03
PRPF4-201ENST00000374198 ZNF165P49910 485 aa15.24■□□□□ 0.03
PRPF4-201ENST00000374198 MMP14P50281 582 aa15.24■□□□□ 0.03
PRPF4-201ENST00000374198 GTF2A1P52655 376 aaPredicted RBP15.24■□□□□ 0.03
PRPF4-201ENST00000374198 MEIS3Q99687 375 aa15.24■□□□□ 0.03
PRPF4-201ENST00000374198 L2HGDHQ9H9P8 463 aa15.24■□□□□ 0.03
PRPF4-201ENST00000374198 SALL3Q9BXA9 1300 aa15.24■□□□□ 0.03
PRPF4-201ENST00000374198 TRIM66O15016 1216 aa15.24■□□□□ 0.03
PRPF4-201ENST00000374198 ZRANB2O95218 330 aaKnown RBP eCLIP15.24■□□□□ 0.03
PRPF4-201ENST00000374198 AK2P54819 239 aa15.24■□□□□ 0.03
PRPF4-201ENST00000374198 RUFY3Q7L099 469 aa15.24■□□□□ 0.03
PRPF4-201ENST00000374198 CADPS2Q86UW7 1296 aa15.24■□□□□ 0.03
PRPF4-201ENST00000374198 KCND1Q9NSA2 647 aa15.24■□□□□ 0.03
PRPF4-201ENST00000374198 SLAIN2Q9P270 581 aa15.24■□□□□ 0.03
PRPF4-201ENST00000374198 LRRFIP2Q9Y608 721 aaKnown RBP15.24■□□□□ 0.03
PRPF4-201ENST00000374198 A0A1W2PP64 1363 aa15.24■□□□□ 0.03
PRPF4-201ENST00000374198 SOX12O15370 315 aa15.23■□□□□ 0.03
PRPF4-201ENST00000374198 AATKQ6ZMQ8 1374 aa15.23■□□□□ 0.03
PRPF4-201ENST00000374198 TTC6Q86TZ1 520 aa15.23■□□□□ 0.03
PRPF4-201ENST00000374198 CHMP4CQ96CF2 233 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms