RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 PATL2C9JE40 543 aaKnown RBP7.88□□□□□ -1.15
CHD6-202ENST00000373222 PKP1Q13835 747 aa7.88□□□□□ -1.15
CHD6-202ENST00000373222 ILDR1Q86SU0 546 aaPredicted RBP7.88□□□□□ -1.15
CHD6-202ENST00000373222 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.88□□□□□ -1.15
CHD6-202ENST00000373222 EID1Q9Y6B2 187 aa7.88□□□□□ -1.15
CHD6-202ENST00000373222 FER1L4A9Z1Z3 1794 aa7.88□□□□□ -1.15
CHD6-202ENST00000373222 FLT4P35916 1363 aa7.88□□□□□ -1.15
CHD6-202ENST00000373222 PNMA6EA0A0J9YXQ4 647 aa7.88□□□□□ -1.15
CHD6-202ENST00000373222 CDC45O75419 566 aa7.88□□□□□ -1.15
CHD6-202ENST00000373222 SSFA2P28290 1259 aa7.88□□□□□ -1.15
CHD6-202ENST00000373222 XPCQ01831 940 aaPredicted RBP7.88□□□□□ -1.15
CHD6-202ENST00000373222 IL17REQ8NFR9 667 aa7.88□□□□□ -1.15
CHD6-202ENST00000373222 RTF1Q92541 710 aaKnown RBP7.88□□□□□ -1.15
CHD6-202ENST00000373222 PSMD1Q99460 953 aa7.88□□□□□ -1.15
CHD6-202ENST00000373222 IGSF1Q8N6C5 1336 aa7.87□□□□□ -1.15
CHD6-202ENST00000373222 ANXA1P04083 346 aa7.87□□□□□ -1.15
CHD6-202ENST00000373222 XRCC6P12956 609 aaKnown RBP eCLIP7.87□□□□□ -1.15
CHD6-202ENST00000373222 HOXC9P31274 260 aa7.87□□□□□ -1.15
CHD6-202ENST00000373222 ABTB2Q8N961 1025 aa7.87□□□□□ -1.15
CHD6-202ENST00000373222 KIAA1522Q9P206 1035 aaPredicted RBP7.87□□□□□ -1.15
CHD6-202ENST00000373222 NWD1Q149M9 1564 aa7.87□□□□□ -1.15
CHD6-202ENST00000373222 SBNO1A3KN83 1393 aa7.87□□□□□ -1.15
CHD6-202ENST00000373222 KIAA0232Q92628 1395 aa7.87□□□□□ -1.15
CHD6-202ENST00000373222 LTN1O94822 1766 aa7.87□□□□□ -1.15
CHD6-202ENST00000373222 CARNS1A5YM72 827 aa7.87□□□□□ -1.15
CHD6-202ENST00000373222 HSP90AA1P07900 732 aaKnown RBP7.87□□□□□ -1.15
CHD6-202ENST00000373222 CC2D2BQ6DHV5 1058 aa7.87□□□□□ -1.15
CHD6-202ENST00000373222 TICAM2Q86XR7 235 aa7.87□□□□□ -1.15
CHD6-202ENST00000373222 PHAXQ9H814 394 aaKnown RBP7.87□□□□□ -1.15
CHD6-202ENST00000373222 FAM208AQ9UK61 1670 aaKnown RBP7.87□□□□□ -1.15
CHD6-202ENST00000373222 ARHGEF10O15013 1369 aa7.86□□□□□ -1.15
CHD6-202ENST00000373222 KDRP35968 1356 aa7.86□□□□□ -1.15
CHD6-202ENST00000373222 FKBP5Q13451 457 aaPredicted RBP7.86□□□□□ -1.15
CHD6-202ENST00000373222 ANKRD13DQ6ZTN6 518 aa7.86□□□□□ -1.15
CHD6-202ENST00000373222 SNX21Q969T3 373 aa7.86□□□□□ -1.15
CHD6-202ENST00000373222 SPATA32Q96LK8 384 aa7.86□□□□□ -1.15
CHD6-202ENST00000373222 IRX2Q9BZI1 471 aaPredicted RBP7.86□□□□□ -1.15
CHD6-202ENST00000373222 K7ELQ4 463 aaPredicted RBP7.86□□□□□ -1.15
CHD6-202ENST00000373222 KCNQ3O43525 872 aa7.86□□□□□ -1.15
CHD6-202ENST00000373222 GAS2L3Q86XJ1 694 aa7.86□□□□□ -1.15
CHD6-202ENST00000373222 LRRC59Q96AG4 307 aaKnown RBP7.86□□□□□ -1.15
CHD6-202ENST00000373222 USP26Q9BXU7 913 aa7.86□□□□□ -1.15
CHD6-202ENST00000373222 IVNS1ABPQ9Y6Y0 642 aa7.86□□□□□ -1.15
CHD6-202ENST00000373222 XRN1Q8IZH2 1706 aaKnown RBP7.86□□□□□ -1.15
CHD6-202ENST00000373222 SND1Q7KZF4 910 aaKnown RBP eCLIP7.85□□□□□ -1.15
CHD6-202ENST00000373222 ZGPATQ8N5A5 531 aaKnown RBP7.85□□□□□ -1.15
CHD6-202ENST00000373222 IL25Q9H293 177 aa7.85□□□□□ -1.15
CHD6-202ENST00000373222 LGR6Q9HBX8 967 aa7.85□□□□□ -1.15
CHD6-202ENST00000373222 SLIT1O75093 1534 aa7.85□□□□□ -1.15
CHD6-202ENST00000373222 PTPRCP08575 1304 aa7.85□□□□□ -1.15
CHD6-202ENST00000373222 ARHGAP23Q9P227 1491 aa7.85□□□□□ -1.15
CHD6-202ENST00000373222 TUBGCP6Q96RT7 1819 aa7.85□□□□□ -1.15
CHD6-202ENST00000373222 DTNBO60941 627 aa7.85□□□□□ -1.15
CHD6-202ENST00000373222 UNC5CLQ8IV45 518 aa7.85□□□□□ -1.15
CHD6-202ENST00000373222 RPAP2Q8IXW5 612 aaPredicted RBP7.85□□□□□ -1.15
CHD6-202ENST00000373222 RRAGDQ9NQL2 400 aaPredicted RBP7.85□□□□□ -1.15
CHD6-202ENST00000373222 TBX22Q9Y458 520 aa7.85□□□□□ -1.15
CHD6-202ENST00000373222 TTC21AQ8NDW8 1320 aa7.84□□□□□ -1.15
CHD6-202ENST00000373222 GNAT3A8MTJ3 354 aa7.84□□□□□ -1.15
CHD6-202ENST00000373222 MAP4K4O95819 1239 aaPredicted RBP7.84□□□□□ -1.15
CHD6-202ENST00000373222 EIF2S2P20042 333 aaKnown RBP7.84□□□□□ -1.15
CHD6-202ENST00000373222 RAB3GAP1Q15042 981 aa7.84□□□□□ -1.15
CHD6-202ENST00000373222 NBPF6Q5VWK0 638 aa7.84□□□□□ -1.15
CHD6-202ENST00000373222 NOL8Q76FK4 1167 aaKnown RBP7.84□□□□□ -1.15
CHD6-202ENST00000373222 NBPF4Q96M43 638 aa7.84□□□□□ -1.15
CHD6-202ENST00000373222 CHMP4BQ9H444 224 aaKnown RBP7.84□□□□□ -1.15
CHD6-202ENST00000373222 IL1RAPL2Q9NP60 686 aa7.84□□□□□ -1.15
CHD6-202ENST00000373222 LRRFIP2Q9Y608 721 aaKnown RBP7.84□□□□□ -1.15
CHD6-202ENST00000373222 LRRC37A3O60309 1634 aa7.84□□□□□ -1.15
CHD6-202ENST00000373222 FSD2A1L4K1 749 aa7.84□□□□□ -1.16
CHD6-202ENST00000373222 PDE1AP54750 535 aa7.84□□□□□ -1.16
CHD6-202ENST00000373222 PCMTD1Q96MG8 357 aaPredicted RBP7.84□□□□□ -1.16
CHD6-202ENST00000373222 GOLGA6L3A6NEY3 463 aa7.83□□□□□ -1.16
CHD6-202ENST00000373222 GPR37O15354 613 aa7.83□□□□□ -1.16
CHD6-202ENST00000373222 PALD1Q9ULE6 856 aa7.83□□□□□ -1.16
CHD6-202ENST00000373222 KIF24Q5T7B8 1368 aa7.83□□□□□ -1.16
CHD6-202ENST00000373222 RBM47A0AV96 593 aaKnown RBP7.83□□□□□ -1.16
CHD6-202ENST00000373222 PRAMEF22A3QJZ6 481 aa7.83□□□□□ -1.16
CHD6-202ENST00000373222 PPP1R37O75864 691 aa7.83□□□□□ -1.16
CHD6-202ENST00000373222 LSM11P83369 360 aaKnown RBP eCLIP7.83□□□□□ -1.16
CHD6-202ENST00000373222 STK31Q9BXU1 1019 aa7.83□□□□□ -1.16
CHD6-202ENST00000373222 BOLA1Q9Y3E2 137 aa7.83□□□□□ -1.16
CHD6-202ENST00000373222 TCHHQ07283 1943 aa7.82□□□□□ -1.16
CHD6-202ENST00000373222 AMHR2Q16671 573 aa7.82□□□□□ -1.16
CHD6-202ENST00000373222 THEMISQ8N1K5 641 aaPredicted RBP7.82□□□□□ -1.16
CHD6-202ENST00000373222 USP44Q9H0E7 712 aa7.82□□□□□ -1.16
CHD6-202ENST00000373222 ZNF330Q9Y3S2 320 aaPredicted RBP7.82□□□□□ -1.16
CHD6-202ENST00000373222 CACNA1FO60840 1977 aa7.82□□□□□ -1.16
CHD6-202ENST00000373222 MAP3K5Q99683 1374 aa7.81□□□□□ -1.16
CHD6-202ENST00000373222 GNAI2P04899 355 aa7.81□□□□□ -1.16
CHD6-202ENST00000373222 NBPF7P0C2Y1 421 aaPredicted RBP7.81□□□□□ -1.16
CHD6-202ENST00000373222 CHRM1P11229 460 aaPredicted RBP7.81□□□□□ -1.16
CHD6-202ENST00000373222 MPRIPQ6WCQ1 1025 aa7.81□□□□□ -1.16
CHD6-202ENST00000373222 NUTM1Q86Y26 1132 aa7.81□□□□□ -1.16
CHD6-202ENST00000373222 RILPL2Q969X0 211 aa7.81□□□□□ -1.16
CHD6-202ENST00000373222 SALL3Q9BXA9 1300 aa7.81□□□□□ -1.16
CHD6-202ENST00000373222 ESCO1Q5FWF5 840 aa7.81□□□□□ -1.16
CHD6-202ENST00000373222 HDGFL1Q5TGJ6 251 aa7.81□□□□□ -1.16
CHD6-202ENST00000373222 CCDC102AQ96A19 550 aa7.81□□□□□ -1.16
CHD6-202ENST00000373222 ORAI2Q96SN7 254 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms